|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000100_pilon:1140551..1144501+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_036645 ID=XLOC_036645|Name=XLOC_036645|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3951bp|location=Sequence derived from alignment at sc0000100_pilon:1140551..1144501+ (Clytia hemisphaerica_ch_hm2_pilon)
atgttcaaatcaaaaaaaattgacaagtgTGATATTCAGTTCGAAAATGA
TCGTCTTGTGTTTTACCCTGGTGAAAAATTGCGCGGGAAATTTATCCTAC
ACATGAACAGAAGTATGCCAATGGAAAGAATCATGGTTGTTTGTAAAGGA
AAGACCAAAACAGAATGGATAGTACCTTACATTGATAGTgaaactcaaga
accaaaagaaagagaacacaaaagcaaacataaatatttcgagaaaaaga
agaaaatatttggtatGATTATTTCAGTTGATGACCTTTACATAGGGTTT
GGATGACCTAAGAATTTAGGTTACAACTAGTATTTAGGCACCCTCTAGTT
GAAAAGTATAAGTTGTGAACAAAAGTTTTGGTAATAACGCCATTCCTGAA
AAAGGGTTAAtgtatgttttatttttccattaacCCCCTTGAATTCCAGG
TAGTTTTAGGTTTAAACTCCACTGAAATCCTGAAGATTTTATAGGAAATA
AAGGATAGTTCCCATTGAATTCCAGTTATTTCTGTTTGTTTTGTGTTCCT
CCGTGAAATTGAGTTGTATGTAATTCAAGTAAGACTTCATTTGAATTAAG
TTGattattgggctgttccattaaaaaaccatacaaggGGGTatacgaac
cttttcaagtcaaaaaaatatttattggaaATTTGTGAATACCCCTGGAA
AGTGGCagaatttgcaaaaatacctttggaaagatttttttcatacctta
aagtaagcatggacaaaataaaatcagtcttctaccccctggaaatttta
gaataactttttacccccttggaaaaaatgacaaaatacctcgactggaa
aattttttcggATTACCCTCTGAAAAAGTTCGTAAgtttgtccaccccct
gtattgatataaatggaatggcccattttaaAAACGTCCAAAGTTTCTCT
GAGTTTCTTCCACATCTTTTTTATGATGATTTGACTGTTCTTTTTAAACA
GGGGAAGATGATAATGAGAAGCGAGACCAAGATGCTGGTGAGCATGAGTT
CGATTTTGAATTCCAATTACCCAAAGATATTCATTCATCCATTCAACATG
AGAACGGATTCATACAATACAGTGTAAAAGTCATTATCAAGAAACCATGG
AAGAAAGATCTGAagttgaagaaaatgtttgtcGTCAATCAACTTCATGA
TGCAAATGATCAAAAGTATAATTTTGCACCTGGAGAAGAAGATGAAAAGG
TTTTGGGTAAGTTTGAACTCCTCATtgatcttcatcttcatcttcatgtA
AAATGTTGAACATATTGAGACAATTTATTTCTTTCATCATCTTTATTCTA
TTTAAGTTACCCGCCAAAAGgcctacatacactacacaatatattgtcag
acaATTGCTGAATGCCGGGAATATATTGAacaggtgtccgcaatataatt
gtcagctcgatttgcaatattccaacaatataggggggttgtttacagaa
agaaaatgcctttttataatagagcgCCTATTGTCTActccgtacattac
ggtccaCAAACCGTTATTGTCAAATATTGctcaccaatatattgtgtagt
ctaagtagcccttaacgTAAAAGTTAAGGTCATGCTTTTGGTTAGATATT
ATCCTTTTAAATACGCATATTATCAGAGGGAGAGAGGAATCTACAGATAC
TACGACTACTAGGCTCCATCTATTCTTCTATTCTTTAACTTTAAACCTTC
TATTTCCAGAATCTTCATctgttttttatcttaattGAATGGACACATTT
CACTTTGCAGGCTGTCTTTGCTGTGCGTCCGAACCCATCTCATTGAAAGC
ACACATCAACCGGTCAGCATTTTGTCCTGGAGATCGAATTATGGTGACAG
CTAAATGTGACAACAAATCTGACCGAGATATGGAAGAATTGGAGGTGGAA
TTAATACAAGTTCTTGAGTTCAAAGCGCACAATGAAGATTTTGGAGATAG
TTATAGGACTCTCACGAACAAGGTCGCGGAAGTTGAAagtaagtttcaaa
ttttgtgattaaaacattaatttttgacctTGAATATTTGTACTATTGTC
TTTTAGCGAAAAAGAATTTGGTACCTTAGCCAAAGATTATGTTTTTAGCT
CTCAATACACTTACCAACCCTTAGCAGCGCGGTTGGCTTTTTGTTACTTT
ATCGCTTAAAAATGCGAGGGTGTGattctctcaaaataaaagagaaaaga
cTGAAGAATGGTTCAGAAGCTTaaaaaaaTGCAAGgatatctttcatttt
tcacaAGAGAACTCCTACACTTGTGTTTCGATACCGTCGTCGAAAAGAAT
TTTACTTGCATTTTCTTTACCAGTCTCCGCGTCGCTGAGGTTTGTTAATT
CTCTAAAGTATAAAAGTAATCAAAGGATGATACTAAATGATACGTGTACC
AAAAAGACCTCTCTTATACTAATATTCACCAtttttttaggcaaaaagat
CAAAGGAGGAGACGAACTAGAATGGAAAGACAAACTAATGGATATCCCTG
CTCTCCCTCTCACAACAAACAGCAAATTCATTGACGTCAAGTATTACGTT
CGCGTGCATCTGGACATCCCGATGGCGATAGATATGGAGTTTAAACTTCC
CATCACTATGTGTTCTGTACCTTTCAAACCTACCTACCAAGATGCACCAT
TAGAACGACAGACCAGATTTAGTGAGTTTCTCTTAGTAGAGGCAAAACTT
TACGAATTTACAGCGCACACATTTTTTACCCTATCTTAATGACTGCAAAC
ATAATATCTATTTGTCTTTGAATACGAAATCatagaatatttttaaagat
ataACATCTAGCAACTAAAGGTTGTTTGTTTCGATCCTCCGTCTAATGTA
TAGCACTGAAAACATAGATTTAGTCTCTACCTCGCTAGGGATATCACCAC
AGGCACAAAGTCTTATCTTTTTGACTTAAGAAGAAGTCATTCGGGATATT
AGCATATGACGGTAGCGACGAGTTAATTATCTCTTATCGTTTTTTCATAT
CTTACAGAACCTAAAGCGCCAGAAGGTATCGGCTATTCAGACATGGATTA
CTTGAATCATCCAGACATGTGGCCTTTCCAATTTTCACAAGTTAAAGGAG
ACAAACCTAAGAAGATGAACAAAAAAGATGATAAAGAATTTGCTGATGAT
TTGTACATCCCAGTTTACACTTTCGCTTTCCCTGTCGAGGTAAaaatata
cagttgactctctctaattcgatcaaagatttctttcgaaatagaGAAAG
ATTCTAATTAAGAAGTTATTTTAAACCACTTTTCAGCTGAAGGGATcgat
attttagttcgaattacagaaagattcgattaatggagattcgaattaga
gagagttgaatGTAATACTTTCTTCATTTCGATATATAAGAGTTACCGTA
CTCCTGAAGATTTAGGATACTCTTGACCCCTCAGATTTTCGAACCACTTT
TTGGATACATACCATTGGTTTTTTATGGGTCCTCTGGACTTTATCAGCTT
ACGCCCTGcattttttaatgtttagaTGTATTCAGTGTAGCATAGTAATG
CTATTTTAATCGGGACAAAATTTACGCATAgattatacaccttttcgacc
gtagccgccaattgccgcggcGGGcatgtccgttttaccacccgaaaacc
gtcccagtctttttttcgcacctataggcaatagaaaaaggtgtcaaaaa
atgattggattgagtttaggtggataattaaataatcaaGTGGCACGCGT
CTGACCGTGCgactacgatcgaaaaggtgtattacttGGATATTTTCTAC
TTTAGGGTATGGACAATCCACATCCGCCCAGCCAACCTTCAGGTGGTGGT
TCTGCCACCTCAGTCAAAACAAATAGCTCCGAAATGCCACCCATTGAATA
A Coding sequence (CDS) from alignment at sc0000100_pilon:1140551..1144501+ >XLOC_036645 ID=XLOC_036645|Name=XLOC_036645|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2508bp|location=Sequence derived from alignment at sc0000100_pilon:1140551..1144501+ (Clytia hemisphaerica_ch_hm2_pilon)
atgttcaaatcaaaaaaaattgacaagtgTGATATTCAGTTCGAAAATGA
TCGTCTTGTGTTTTACCCTGGTGAAAAATTGCGCGGGAAATTTATCCTAC
ACATGAACAGAAGTATGCCAATGGAAAGAATCATGGTTGTTTGTAAAGGA
AAGACCAAAACAGAATGGATAGTACCTTACATTGATAGTgaaactcaaga
accaaaagaaagagaacacaaaagcaaacataaatatttcgagaaaaaga
agaaaatatttgatgttcaaatcaaaaaaaattgacaagtgTGATATTCA
GTTCGAAAATGATCGTCTTGTGTTTTACCCTGGTGAAAAATTGCGCGGGA
AATTTATCCTACACATGAACAGAAGTATGCCAATGGAAAGAATCATGGTT
GTTTGTAAAGGAAAGACCAAAACAGAATGGATAGTACCTTACATTGATAG
Tgaaactcaagaaccaaaagaaagagaacacaaaagcaaacataaatatt
tcgagaaaaagaagaaaatatttgGGGAAGATGATAATGAGAAGCGAGAC
CAAGATGCTGGTGAGCATGAGTTCGATTTTGAATTCCAATTACCCAAAGA
TATTCATTCATCCATTCAACATGAGAACGGATTCATACAATACAGTGTAA
AAGTCATTATCAAGAAACCATGGAAGAAAGATCTGAagttgaagaaaatg
tttgtcGTCAATCAACTTCATGATGCAAATGATCAAAAGTATAATTTTGC
ACCTGGAGAAGAAGATGAAAAGGTTTTGGGGGAAGATGATAATGAGAAGC
GAGACCAAGATGCTGGTGAGCATGAGTTCGATTTTGAATTCCAATTACCC
AAAGATATTCATTCATCCATTCAACATGAGAACGGATTCATACAATACAG
TGTAAAAGTCATTATCAAGAAACCATGGAAGAAAGATCTGAagttgaaga
aaatgtttgtcGTCAATCAACTTCATGATGCAAATGATCAAAAGTATAAT
TTTGCACCTGGAGAAGAAGATGAAAAGGTTTTGGGCTGTCTTTGCTGTGC
GTCCGAACCCATCTCATTGAAAGCACACATCAACCGGTCAGCATTTTGTC
CTGGAGATCGAATTATGGTGACAGCTAAATGTGACAACAAATCTGACCGA
GATATGGAAGAATTGGAGGTGGAATTAATACAAGTTCTTGAGTTCAAAGC
GCACAATGAAGATTTTGGAGATAGTTATAGGACTCTCACGAACAAGGTCG
CGGAAGTTGAAaGCTGTCTTTGCTGTGCGTCCGAACCCATCTCATTGAAA
GCACACATCAACCGGTCAGCATTTTGTCCTGGAGATCGAATTATGGTGAC
AGCTAAATGTGACAACAAATCTGACCGAGATATGGAAGAATTGGAGGTGG
AATTAATACAAGTTCTTGAGTTCAAAGCGCACAATGAAGATTTTGGAGAT
AGTTATAGGACTCTCACGAACAAGGTCGCGGAAGTTGAAagcaaaaagat
CAAAGGAGGAGACGAACTAGAATGGAAAGACAAACTAATGGATATCCCTG
CTCTCCCTCTCACAACAAACAGCAAATTCATTGACGTCAAGTATTACGTT
CGCGTGCATCTGGACATCCCGATGGCGATAGATATGGAGTTTAAACTTCC
CATCACTATGTGTTCTGTACCTTTCAAACCTACCTACCAAGATGCACCAT
TAGAACGACAGACCAGATTTAgcaaaaagatCAAAGGAGGAGACGAACTA
GAATGGAAAGACAAACTAATGGATATCCCTGCTCTCCCTCTCACAACAAA
CAGCAAATTCATTGACGTCAAGTATTACGTTCGCGTGCATCTGGACATCC
CGATGGCGATAGATATGGAGTTTAAACTTCCCATCACTATGTGTTCTGTA
CCTTTCAAACCTACCTACCAAGATGCACCATTAGAACGACAGACCAGATT
TAAACCTAAAGCGCCAGAAGGTATCGGCTATTCAGACATGGATTACTTGA
ATCATCCAGACATGTGGCCTTTCCAATTTTCACAAGTTAAAGGAGACAAA
CCTAAGAAGATGAACAAAAAAGATGATAAAGAATTTGCTGATGATTTGTA
CATCCCAGTTTACACTTTCGCTTTCCCTGTCGAGAACCTAAAGCGCCAGA
AGGTATCGGCTATTCAGACATGGATTACTTGAATCATCCAGACATGTGGC
CTTTCCAATTTTCACAAGTTAAAGGAGACAAACCTAAGAAGATGAACAAA
AAAGATGATAAAGAATTTGCTGATGATTTGTACATCCCAGTTTACACTTT
CGCTTTCCCTGTCGAGGGTATGGACAATCCACATCCGCCCAGCCAACCTT
CAGGTGGTGGTTCTGCCACCTCAGTCAAAACAAATAGCTCCGAAATGCCA
CCCATTGAATAAGGTATGGACAATCCACATCCGCCCAGCCAACCTTCAGG
TGGTGGTTCTGCCACCTCAGTCAAAACAAATAGCTCCGAAATGCCACCCA
TTGAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000100_pilon | genome | sc0000100_pilon:1140551..1144501 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1159-1254:3856 |
| Aaloc | 979-1158:3060 |
| Aaloc | 748-975:2493 |
| Aaloc | 520-744:1813 |
| Aaloc | 265-516:1004 |
| Aaloc | 1-261:1 |
|
