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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000100_pilon:1146503..1149856- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_036637 ID=XLOC_036637|Name=XLOC_036637|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3354bp|location=Sequence derived from alignment at sc0000100_pilon:1146503..1149856- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGAGTTAATGAAGTGGCAGATCGCAACAGTCCGCCAGCATTGAACAT
GGAGACTTTACTGCAAAACAAATCAGACATCAAATTGAACGGAAGCACAG
GCAAATATACCGAAGATGTGCAAGAAGAAGAAGATTATGACTTTTACCGA
TTCATTGTGTCTGATTTCCATGGCATTGCTCGAAGCAAGTTGGTTACCAA
ATCTGCGTATAAATATATGAAGAAACGGGGCCCTGGTATCGCCTGGAAAA
CCGTTTTGTTGTCCTTTGATAACTACTTCAATTGCGAAGCGAAAAGGTTG
GATGGAGAAAGATGCACTGACGCTAGGCTAACTCCAGCTGAAGATTTGAG
CGTGCCGCGGTCACTTCCTTGGGCAGGAGAAGGGTATAAGATTGCAGGTG
TTTTATGTGAGACATGGTGGGGCATTGATGGGTTGCGACAACAAGCATGC
CCACGATACATGGCGCGCCGATTATGTGATCAGCTAGAATCGGAATTTGG
TCTTCGCATTTTCCACGGTACCGAAATGGAGTTTACCTTGTTCAAAGAAA
AAGGTGTGCCAGAGTTCGATGATGGTGGTTTGTACATTCCACAGGAGTTG
GATACTGTGTGCAAAGAACTTCTCCCGTTATCCAAACACTGTGAAGCTGC
TGGTATCCCTATTGAAACATTGCAAACTGAATTCGGTCCTGGACAGTTGG
AGGTAGGCTTTAGTTTCTCCTTTTCACTTTCTTCTCTTTGGTAAAAAAAC
CCTATTAGATGTCTCACTGTTTGAAGCTTGAGATTTCTGTGACCAGGGTT
GATTAACTAGATACGTTTATTTATCAAGTAGCACTAGATAATTTTCCAGT
CACAATAACAAACGCGTTGACCCTCAAGTCAAGTCACGCTAAGGATCTTC
CAGTGCAAATTAAATTTCAAAAACTAACTGATAACATAGTAATAGATCTT
ATCGGAGTTTTTTATTTTTCTAAAAAAGCGATGCATTGTGGGATTGTTTT
GGGGGTACAATATAAATTTCTTAGGAATTCCTCGATGGAATTCTATTGTA
ATACCCCCGGGTGAGTTGAGATACCCCAATGAGATGAGATTCTTCATACA
GAAAAAGGGATAGGTTGATTCAACCGTGAATGTTATATGGTGATCAAGAC
TTTACAAATAAATATCCCTTATTCTTCTTTAGGTTGTTTTGAAACCAGCG
TACGGAATTGAGGGAGCAGACAACAGTTTCTTATTCAAATGTGCAGCTAA
AGAAATCCTTGCAAAACCTGGTTTCCATGGACGCGCAACATTTATGTCTA
AACCAATCATCGACAAAGTTGGAAGCTCCAACCATTTCAATCACTCTCTT
TGGAAGGTAGTTTTAGTACTTTTTAGTTGAAGAATCTCATATGTTTCTAA
CATTTTATGTTTTGTGAGGTGAATGGAATATGAAGGGGCAGGGTTCGAAC
CCAGGAAAAGCGTGGTAAGAATTATATGGTCGCCAAGTAACACTGTCTCA
CTGCCCTGGTGGAAATTTTTTCCTCAGTGGGGATAAAAATTCCTATTGAA
ATTCCAATGGGGATATAAATTTCATTGTTCCAAGGTTGAAAAATACAGTG
AGGATGGTTTTGTTGGAGTGCAAACGGGACGAAAGAGGGACGAAAATTTT
GTTATGGGCCATATTATTTTTCTTGAAGGTGGAGTGAAACTGTGCATTAT
TATCAAAACGTAGTAATAAAAACAACAAACTATTCTTAAACCTTCTACTC
TAGGTAAAGGACAACGGTGAACTAGAAGACTCAATGTGGGATGGAACACA
GGAGAGTAAACTAACCAAGACTGCTCAACACTGGCTGGCTGGAATTCTCA
AACACACACCAGCACTCGCAGGTAACCTGTCGTCATAGCACACCAAAGTT
GAAAGTCACACTTTGTGTATTATCAAGGAAAAAATTCAAAATTCTTAAGA
CCGTGAAAAATGGTTGATTTAAGATAATAATCATGGCATTCTTAAATATA
GAAACATTTTTTCGAAATGGTGCTTATGGTGACGTGAGTGTATAAATGAG
TGAAATTTAACTTTTCGTACAATCTTTGCTATCTCGGACAATCTTCGGCA
AGATATGTCATTTTTTGTACACATATCTTATGGAAAACATCAAAATGATC
AACTGATGATGAAGGGACAAAAAAAATATCATATGACTATGAAAAACTCA
TGACTTACCAAAATACATTTTGAGGCTAAAAACACCTAAATTTAAACCAC
ATTTTCTTTCTTTTTCAGCCATTTTTAACCCCACTGTCAACGATTGGAGA
AGATTACATATCACGGCTAGTACTCGTGATATCAGTAAGTCTTGTAACAA
ATACATATAATGCCCTCGGAAAATAAAACCCAAAATTTCTAAGGCGTTCA
AAAGGTTTTCTCGAGTAAGTCTTCGAACGTATTTGAGTCGACCCGAAGGC
TCCTCATTTGATAGCTGTCTACCCTAAAATAGAAGAGGTACCACTCTTAT
TATCTTCACAACGTCTTTTCTCTCGGATACCCATTTTCTAGTAAAACAAA
AAATTCAGATGTCTCCTTAGCCGGGAGATTACATCATAATAAAATCACTG
AAAAGCTCTTACCTCAAAAGTTCAGCAGCTTTGATTTTACATCGAATACC
CTTCGAAATTCTGTCTTTCAACCTTTAAAAACGGGATAGAAAATTTTAGA
ATTGAAAAGAAACTCAATACTCCCGACACGGTTACTTTTGAATAATAACG
TAATTTTGTTAAAATAATATCACGTTGTCAACAGAACAAAGCATTGAGCT
TTAAGCCCTGAAGGAATCTGTTGGAACCTCTTTCTGTCTGGGCTTTAAAC
TCAGTTGAATAAAGATCCCGAACCACTCCAGCCTTCTAAACAGTTATAAA
TATATAAACACACTCACCGTGAATAAATTCATTTTTAGCCACTCCACATT
ACATCACGTGGGGTATCGAAAACCGATTAACATTGATCCGCGTTATCGCC
CGAGGCGCCGGTAAAGCTACATATCTGGAGAACCGGTTACCCGGGGCAAC
CATGAATCCGTATCTTGCACTGGCCGGTATGGTTGCTGCCGGTATTGATG
GTATCCGGAACAAAATCGAATTACCGGCTCCTGGAAATACGGAAAATGAA
TTCGGAGTTTTGCCAGGTACTCTTGAAGAGGCTTTGGATGCGCTGAAGAG
TAGTAATGTCATGCGCGAGCATCTTGGTGATGAATTTGTCAACTGGTTTG
TGTGTGCCAAGGAGAAAGAAATCGAAGTCTTGAATGAATACACAGAGAAG
AATGGGGGCGATTCTTTCCAAACTGAAGTTGACTTCTATTCCAAATGGAT
CTAA Coding sequence (CDS) from alignment at sc0000100_pilon:1146503..1149856- >XLOC_036637 ID=XLOC_036637|Name=XLOC_036637|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2952bp|location=Sequence derived from alignment at sc0000100_pilon:1146503..1149856- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGAGTTAATGAAGTGGCAGATCGCAACAGTCCGCCAGCATTGAACAT
GGAGACTTTACTGCAAAACAAATCAGACATCAAATTGAACGGAAGCACAG
GCAAATATACCGAAGATGTGCAAGAAGAAGAAGATTATGACTTTTACCGA
TTCATTGTGTCTGATTTCCATGGCATTGCTCGAAGCAAGTTGGTTACCAA
ATCTGCGTATAAATATATGAAGAAACGGGGCCCTGGTATCGCCTGGAAAA
CCGTTTTGTTGTCCTTTGATAACTACTTCAATTGCGAAGCGAAAAGGTTG
GATGGAGAAAGATGCACTGACGCTAGGCTAACTCCAGCTGAAGATTTGAG
CGTGCCGCGGTCACTTCCTTGGGCAGGAGAAGGGTATAAGATTGCAGGTG
TTTTATGTGAGACATGGTGGGGCATTGATGGGTTGCGACAACAAGCATGC
CCACGATACATGGCGCGCCGATTATGTGATCAGCTAGAATCGGAATTTGG
TCTTCGCATTTTCCACGGTACCGAAATGGAGTTTACCTTGTTCAAAGAAA
AAGGTGTGCCAGAGTTCGATGATGGTGGTTTGTACATTCCACAGGAGTTG
GATACTGTGTGCAAAGAACTTCTCCCGTTATCCAAACACTGTGAAGCTGC
TGGTATCCCTATTGAAACATTGCAAACTGAATTCGGTCCTGGACAGTTGG
AGATGGGAGTTAATGAAGTGGCAGATCGCAACAGTCCGCCAGCATTGAAC
ATGGAGACTTTACTGCAAAACAAATCAGACATCAAATTGAACGGAAGCAC
AGGCAAATATACCGAAGATGTGCAAGAAGAAGAAGATTATGACTTTTACC
GATTCATTGTGTCTGATTTCCATGGCATTGCTCGAAGCAAGTTGGTTACC
AAATCTGCGTATAAATATATGAAGAAACGGGGCCCTGGTATCGCCTGGAA
AACCGTTTTGTTGTCCTTTGATAACTACTTCAATTGCGAAGCGAAAAGGT
TGGATGGAGAAAGATGCACTGACGCTAGGCTAACTCCAGCTGAAGATTTG
AGCGTGCCGCGGTCACTTCCTTGGGCAGGAGAAGGGTATAAGATTGCAGG
TGTTTTATGTGAGACATGGTGGGGCATTGATGGGTTGCGACAACAAGCAT
GCCCACGATACATGGCGCGCCGATTATGTGATCAGCTAGAATCGGAATTT
GGTCTTCGCATTTTCCACGGTACCGAAATGGAGTTTACCTTGTTCAAAGA
AAAAGGTGTGCCAGAGTTCGATGATGGTGGTTTGTACATTCCACAGGAGT
TGGATACTGTGTGCAAAGAACTTCTCCCGTTATCCAAACACTGTGAAGCT
GCTGGTATCCCTATTGAAACATTGCAAACTGAATTCGGTCCTGGACAGTT
GGAGGTTGTTTTGAAACCAGCGTACGGAATTGAGGGAGCAGACAACAGTT
TCTTATTCAAATGTGCAGCTAAAGAAATCCTTGCAAAACCTGGTTTCCAT
GGACGCGCAACATTTATGTCTAAACCAATCATCGACAAAGTTGGAAGCTC
CAACCATTTCAATCACTCTCTTTGGAAGGTTGTTTTGAAACCAGCGTACG
GAATTGAGGGAGCAGACAACAGTTTCTTATTCAAATGTGCAGCTAAAGAA
ATCCTTGCAAAACCTGGTTTCCATGGACGCGCAACATTTATGTCTAAACC
AATCATCGACAAAGTTGGAAGCTCCAACCATTTCAATCACTCTCTTTGGA
AGGTAAAGGACAACGGTGAACTAGAAGACTCAATGTGGGATGGAACACAG
GAGAGTAAACTAACCAAGACTGCTCAACACTGGCTGGCTGGAATTCTCAA
ACACACACCAGCACTCGCAGGTAAAGGACAACGGTGAACTAGAAGACTCA
ATGTGGGATGGAACACAGGAGAGTAAACTAACCAAGACTGCTCAACACTG
GCTGGCTGGAATTCTCAAACACACACCAGCACTCGCAGCCATTTTTAACC
CCACTGTCAACGATTGGAGAAGATTACATATCACGGCTAGTACTCGTGAT
ATCACCATTTTTAACCCCACTGTCAACGATTGGAGAAGATTACATATCAC
GGCTAGTACTCGTGATATCACCACTCCACATTACATCACGTGGGGTATCG
AAAACCGATTAACATTGATCCGCGTTATCGCCCGAGGCGCCGGTAAAGCT
ACATATCTGGAGAACCGGTTACCCGGGGCAACCATGAATCCGTATCTTGC
ACTGGCCGGTATGGTTGCTGCCGGTATTGATGGTATCCGGAACAAAATCG
AATTACCGGCTCCTGGAAATACGGAAAATGAATTCGGAGTTTTGCCAGGT
ACTCTTGAAGAGGCTTTGGATGCGCTGAAGAGTAGTAATGTCATGCGCGA
GCATCTTGGTGATGAATTTGTCAACTGGTTTGTGTGTGCCAAGGAGAAAG
AAATCGAAGTCTTGAATGAATACACAGAGAAGAATGGGGGCGATTCTTTC
CAAACTGAAGTTGACTTCTATTCCAAATGGATCTAACCACTCCACATTAC
ATCACGTGGGGTATCGAAAACCGATTAACATTGATCCGCGTTATCGCCCG
AGGCGCCGGTAAAGCTACATATCTGGAGAACCGGTTACCCGGGGCAACCA
TGAATCCGTATCTTGCACTGGCCGGTATGGTTGCTGCCGGTATTGATGGT
ATCCGGAACAAAATCGAATTACCGGCTCCTGGAAATACGGAAAATGAATT
CGGAGTTTTGCCAGGTACTCTTGAAGAGGCTTTGGATGCGCTGAAGAGTA
GTAATGTCATGCGCGAGCATCTTGGTGATGAATTTGTCAACTGGTTTGTG
TGTGCCAAGGAGAAAGAAATCGAAGTCTTGAATGAATACACAGAGAAGAA
TGGGGGCGATTCTTTCCAAACTGAAGTTGACTTCTATTCCAAATGGATCT
AA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000100_pilon | genome | sc0000100_pilon:1146503..1149856 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1063-1476:415 |
| Aaloc | 997-1059:1085 |
| Aaloc | 877-993:1602 |
| Aaloc | 703-876:2173 |
| Aaloc | 1-702:3355 |
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