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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000067_pilon:1491394..1494793+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_036582 ID=XLOC_036582|Name=XLOC_036582|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3400bp|location=Sequence derived from alignment at sc0000067_pilon:1491394..1494793+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGACGTTGCAAGATATTGCCAAACATTTCTCCAACCATCGCACATTATT
TAAACGTTTTTCCAGTGGGCAATGCGAGTCGTACAGATATGATGCATATT
TTGGTATCCGCCCAGAGTCAACATTGATTAAAGTAAGTCAAGAATGGACT
GCTTTTTGATGTCAGCCCAAGCTGGATCTTTCCAAGGCacttaaaataat
atttgatttaattatATGTTCCATTTTGAAACCTTATAGTTGAACAAAGC
ATATATTGTTCAACGAACGGAATTAAGTTTGTACATTGTTGAGGGTAGAT
GGGATAGGTCTTTTAGGGTAGTTAAAATATTTATCTAGGGTTCATAGCAT
TTTCCTAGCATTAAGTGGTTTGTAATAATACACTAATAATATAAATTTGC
TTTTGGACAAATCATGTATAAAATTGCTCTGATTAATGTTCAATACGACT
TTTCACTTCTTTTGAAGATCGTAAAAATCAGTGCATTTCTATGCTAATTC
CAATATTTTAGgttttactatttttttcttcaaactgaTACTATTTTTAG
CAAGGAGATTGTCGTATGAAAAGTGTGCGCATCAATATTCTCCCAAACAT
GACCTCGACTATCATTGTCCATGGTGAGTACTCCTCAAAGATCTGTTAAT
GTTCGTGCTTATAACtgtgtttcattttcaatttgcaTTCTTCAAAGTTG
TACATACTGCGAACAATATTCATAGTTTAAAAGGGGAAGTAGAGACTTAG
CCAAAATTACTTGAAACTTTAGGGATTACTTTGCAGAATGTACAAATTCA
GGGTCATGGAATTAAGTCATTTTACTAGGAGGTAAGTAAGTAAAGGTTAG
ACCTCCAATAAAGGGAGGAATACACACTCCTATGCACTCTACTAAATTCA
CAAAAGTAAGTCACTGTAAGATTAGGGCATAGAAAACATaatgaaaaaga
acaatttcTGGTAGTTTCAGTTCACTAAAGGATGATTCTTCATTTTAGAT
GTGTTGCGACCCGACATTGAGCAGTGTCTAAGCGAAAAGCTTAAGAAGTG
TCTTCCTCCATCGATAAAAACAATGGCCATTGAAACAGCCAATTTTCTGA
TGTATGCACTTCTGCCATATGCGCTAAAGGTCATTATCATGGAGGAAGCC
GACCTTCAACATACGGAAGCTCAAtatttcttagatttttgggaAGACTT
GCGACACAAATCTCCTCAGGAAGGCAATGAAATCGGTAAATTTTAGGTCC
TTAGTTTTTGTGTATATAAATTCGATGACTATTCATGTTTCTTTTAAtga
aactttaattttttgttcttcAACTCAGactaaaatactttttcattgCC
ATTTTAGAAGACGAAGAAGGAGAAAGTGATGAAATTGACGACTACCAACC
CACGATGATCGCTAAAGAGGATCTTAATATCAGTGAGTTATCCCTTTTGA
ACACTACCCGTATTTTGTCACTTCAAAGTGCCATcaatttcttattttgt
ttCATCTTGGTTCTTGGGAATTTTAATATCAAAGTGACAAAGTTTGGTTT
AACAAATTTCTTggattcaaaaaatttatcaattgtCTTTTTAGGGTGTG
GTTTGAAACCATTTGAATctggtaagttttttttatctgaCGTATCTAAC
ATGCTACGATGCTAGAAAGGAActtttctttatatacttcttcatatact
ttattttcttcattttttagaaCAGCAGAAAGAAGTAGAAGGGGGAGACG
AAGTAGAAGAAAACTACCAGCTGCCTAGCATGACACATAAAGGAAACGTT
TGTTGTAAGTTATTCATTCGTTTTGAACTTTCCCTAATTCTGTGTTAACT
TTTTGGATCAGCGTTAAGCATATAAAGCAGGATCCTTTAAATAGAAAATA
GTAGgtcaatttgattttatttcaatgttcttttaattttatttttagtt
gcTAATGTCAAACTTGATGATATCATGGCCTCTAAAGATAAACCTGAAAA
TGAGGGTcagtaacaaaaatttttaacacAAAGTCAACATTAAACACTAC
CTTTCATTTACTTTATGTAATTAATTTTCTACAAATCTGAGCGGAATCCT
TTGTCATTGCAttcttagaaaatcaaaaaaaagaaggaaaagaaaaggag
aaaatgaaagaagtagacctacaagaacaagaagaagaagaagaagaaga
agaagaagaagaagaagaagaagaagaagaaaaaaaagaagtaggaaaag
TAGTAGACCATCAGCTGTCTAGCATGGTATCTAAAGAAAATCTGTCTTGT
AAGTTATCTGTTGTGAGCTTTCCATCAtttcattttaacttttttgatca
GCGTTAAGCATATTAAGCAATATCCTTATTATGAAAATGAGATATTGTCT
CCTTCATTTTAATTCGATGCTCTtcctattttatttttagttgcTAATGT
CAAATCTGATGATGTCATGACCTCTAATGATAACGAAAAGCATGATGGTA
AGTggtataaatttttattgtttttgactCAAAGTGTCAAACCCAAACGG
TCATATTCTTGTTACAAAAAGACTGCATAACTGCCACTTCTACAGCAACC
ACTACGACTGAAAACGTCTAATTAACATTCATGTAGTGTTAAATGTATAT
GTTAGATATATTCATAGTGGCTCTGGATCACTTTGGTTAGATTGTAATCA
ATTTGACTATATCAGACCTGGAaacaaatcttcaaatttttcattattgc
CATCTAATCAATTAAAAGAACACAGgcatatttgaaaaattctgtcttat
ttactttattttgtCGCTCCAGCATATTTTGTCCCAAAATCTCTGTCTCT
ATCATATAATAATTAACTAACGTGAAATTGCTACAAGGTGTTTCATTCTA
TTCGATCGTCAGGCTGTTCGGTTTCGTTTTTTGCAATATACCGTTTCATA
CTGAATTTACAACCTTAAAATTGCTATGTGCTCTTACTTGCTTAATTATC
CCGAAAAAAGGTTAATTAATTCACCTTATTTTATATATTTCCAGACTTAG
CAAGGCCTAAATACCGACAGGAGACATACGATCCTGAAGATTGGCACAAA
ACCAAAGTATTTACACGTACTCAATTGCTGGTGATTCTTTACATCGTACG
AGAGGAATTGGGCGAAAAGAAGTTCGTTGGTTGTAAAACATTTTATGGAC
TCCTTAAAAAGGAGTTAGACAAAGGATTTGGACGAGCTacgtttttgcaa
aaaaatgtaaattacaAATGGGTTGTCATCAAGGAGGTGCTGCGAAATAT
GACAATAAAATTGAGGAAAAATACAGAGAAGGAATTGAATGGTTTTAAGA
ATATGGTCTATGACGCAAGAAGGCTGTATAGTTATGATCAACAGcattaa
Coding sequence (CDS) from alignment at sc0000067_pilon:1491394..1494793+ >XLOC_036582 ID=XLOC_036582|Name=XLOC_036582|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2556bp|location=Sequence derived from alignment at sc0000067_pilon:1491394..1494793+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGACGTTGCAAGATATTGCCAAACATTTCTCCAACCATCGCACATTATT
TAAACGTTTTTCCAGTGGGCAATGCGAGTCGTACAGATATGATGCATATT
TTGGTATCCGCCCAGAGTCAACATTGATTAAAATGACGTTGCAAGATATT
GCCAAACATTTCTCCAACCATCGCACATTATTTAAACGTTTTTCCAGTGG
GCAATGCGAGTCGTACAGATATGATGCATATTTTGGTATCCGCCCAGAGT
CAACATTGATTAAACAAGGAGATTGTCGTATGAAAAGTGTGCGCATCAAT
ATTCTCCCAAACATGACCTCGACTATCATTGTCCATGCAAGGAGATTGTC
GTATGAAAAGTGTGCGCATCAATATTCTCCCAAACATGACCTCGACTATC
ATTGTCCATGATGTGTTGCGACCCGACATTGAGCAGTGTCTAAGCGAAAA
GCTTAAGAAGTGTCTTCCTCCATCGATAAAAACAATGGCCATTGAAACAG
CCAATTTTCTGATGTATGCACTTCTGCCATATGCGCTAAAGGTCATTATC
ATGGAGGAAGCCGACCTTCAACATACGGAAGCTCAAtatttcttagattt
ttgggaAGACTTGCGACACAAATCTCCTCAGGAAGGCAATGAAATCGATG
TGTTGCGACCCGACATTGAGCAGTGTCTAAGCGAAAAGCTTAAGAAGTGT
CTTCCTCCATCGATAAAAACAATGGCCATTGAAACAGCCAATTTTCTGAT
GTATGCACTTCTGCCATATGCGCTAAAGGTCATTATCATGGAGGAAGCCG
ACCTTCAACATACGGAAGCTCAAtatttcttagatttttgggaAGACTTG
CGACACAAATCTCCTCAGGAAGGCAATGAAATCGAAGACGAAGAAGGAGA
AAGTGATGAAATTGACGACTACCAACCCACGATGATCGCTAAAGAGGATC
TTAATATCAAAGACGAAGAAGGAGAAAGTGATGAAATTGACGACTACCAA
CCCACGATGATCGCTAAAGAGGATCTTAATATCAGGTGTGGTTTGAAACC
ATTTGAATctgGGTGTGGTTTGAAACCATTTGAATctgaaCAGCAGAAAG
AAGTAGAAGGGGGAGACGAAGTAGAAGAAAACTACCAGCTGCCTAGCATG
ACACATAAAGGAAACGTTTGTTaaCAGCAGAAAGAAGTAGAAGGGGGAGA
CGAAGTAGAAGAAAACTACCAGCTGCCTAGCATGACACATAAAGGAAACG
TTTGTTttgcTAATGTCAAACTTGATGATATCATGGCCTCTAAAGATAAA
CCTGAAAATGAGGttgcTAATGTCAAACTTGATGATATCATGGCCTCTAA
AGATAAACCTGAAAATGAGGaaaatcaaaaaaaagaaggaaaagaaaagg
agaaaatgaaagaagtagacctacaagaacaagaagaagaagaagaagaa
gaagaagaagaagaagaagaagaagaagaagaaaaaaaagaagtaggaaa
agTAGTAGACCATCAGCTGTCTAGCATGGTATCTAAAGAAAATCTGTCTT
aaaatcaaaaaaaagaaggaaaagaaaaggagaaaatgaaagaagtagac
ctacaagaacaagaagaagaagaagaagaagaagaagaagaagaagaaga
agaagaagaagaaaaaaaagaagtaggaaaagTAGTAGACCATCAGCTGT
CTAGCATGGTATCTAAAGAAAATCTGTCTTttgcTAATGTCAAATCTGAT
GATGTCATGACCTCTAATGATAACGAAAAGCATGATGttgcTAATGTCAA
ATCTGATGATGTCATGACCTCTAATGATAACGAAAAGCATGATGACTTAG
CAAGGCCTAAATACCGACAGGAGACATACGATCCTGAAGATTGGCACAAA
ACCAAAGTATTTACACGTACTCAATTGCTGGTGATTCTTTACATCGTACG
AGAGGAATTGGGCGAAAAGAAGTTCGTTGGTTGTAAAACATTTTATGGAC
TCCTTAAAAAGGAGTTAGACAAAGGATTTGGACGAGCTacgtttttgcaa
aaaaatgtaaattacaAATGGGTTGTCATCAAGGAGGTGCTGCGAAATAT
GACAATAAAATTGAGGAAAAATACAGAGAAGGAATTGAATGGTTTTAAGA
ATATGGTCTATGACGCAAGAAGGCTGTATAGTTATGATCAACAGcattaa
ACTTAGCAAGGCCTAAATACCGACAGGAGACATACGATCCTGAAGATTGG
CACAAAACCAAAGTATTTACACGTACTCAATTGCTGGTGATTCTTTACAT
CGTACGAGAGGAATTGGGCGAAAAGAAGTTCGTTGGTTGTAAAACATTTT
ATGGACTCCTTAAAAAGGAGTTAGACAAAGGATTTGGACGAGCTacgttt
ttgcaaaaaaatgtaaattacaAATGGGTTGTCATCAAGGAGGTGCTGCG
AAATATGACAATAAAATTGAGGAAAAATACAGAGAAGGAATTGAATGGTT
TTAAGAATATGGTCTATGACGCAAGAAGGCTGTATAGTTATGATCAACAG
cattaa
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000067_pilon | genome | sc0000067_pilon:1491394..1494793 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 940-1293:3047 |
| Aaloc | 883-936:2443 |
| Aaloc | 763-879:2181 |
| Aaloc | 688-747:2121 |
| Aaloc | 631-684:1951 |
| Aaloc | 547-627:1723 |
| Aaloc | 520-543:1597 |
| Aaloc | 445-516:1360 |
| Aaloc | 208-441:1001 |
| Aaloc | 133-204:551 |
| Aaloc | 1-132:1 |
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