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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000356_pilon:235899..237566- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_036574 ID=XLOC_036574|Name=XLOC_036574|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1668bp|location=Sequence derived from alignment at sc0000356_pilon:235899..237566- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAAATTATATCGTTATTTTTTGCATCTTTTTGCATCAATGCTGTTTA
TTCCAAGTCTTTGAACGATAAAGATGGTAAGATTTTACATAATCAGACAC
TGCTATTCAGGTTAAGTCCCGGTGGAATTTTTTCACACGGTTGGGAAAAA
TGGGGGGTTAGAAATTCTATTGCTCCCAGCTCAAAAATTCCAATTAAAAT
TGTTTTGAAGTGCCATCTTTTTGACGGTGGTCCCAACGGGTCTGTTGGAC
GAAACTGAATAAAAGAAAAGATTTGATGGATGGATTATGTTTACTAGAAA
TCTTACACACCCCTATCTCATTCACCCAGTGGAAGAACTAACCACAGTTA
AAGATTTCCAAGTAGGAATGAGAGCTTAGTGTTATTTTCCGATGGGAGTT
AAATTCAGGGTCCATTTCTCACTAGGAATAGTTTTCCGGTCAGCTTTTTA
ATAGGTAAAAGGTCCCTTCCGATCTTGTTTACATAACAACAATGGAACAG
AGTTCAACATCTCTTTGAGGGGGTATCTGACAGATTTGTGCATCTTTATC
CCTTTAAATTGAATAGAAAATAGCATGAAACAGATTCACCAATCCTATGA
AATAAGCTAATTGGTGACCGAAGGGTTTTCAAACATCGTGTTATTAATTC
TTCATTTTTGGTTTTAGAAGATCAACAAAGCCATGGTAACATGGTTGGCA
AAGGTCCATTTCGAATTCCACACAAGCGAGAATCTTACGGTATGATTGTC
AAAAAAGAAAATGAAGCAGAAGATCACACCTGGAAAGAAAGTACAAAACA
AAATGGTCTTCAAAAACGAAAGGTTGAGACGTCAGGTTGGCTTGATATGA
AGAAGAAGAAGAGATCAGGTGATGAGGAAGATGATTTCCAAAAACCAGGG
ATCGATGAAGTTAAGGATAAAGCATTCATTCCAATGAAATTATACGCTTT
ATCCAGAAAACGAAGTTTTGCAGCTGAAAATAATCCCATTTCAAAATGGT
ACAAAAGAGACAGCGAAAATGGTAACCCAATTCATAAATGGTATAAGAGC
GAAGTGAGAAATGCAGATGATGATGTGAATGGGGAAATTTTCGAAGATAA
ATTGGAACAGGATCGACTTCCAACGCGATGGATGGATGAGCTTTCTCGAT
CGGGCACCAATCAAGATCTTGAAGATGAATATGAAATTAAAGAGCGCAAT
TTCAAAGAAGATGATGAACGAAAGATGAGACAAAACGGACTGCAAAAGAA
AGATGACTATGGACAATATGATGTTGAGTACGAGAAGATCATGAGACGGC
AAGCCGACGAACAACAAAAGAAGAACGACGACTATAGACGTTACAATGAA
GAGAACGAGAAGATCATGAGACGGCAAGCCGACGAACAACAAAAGAAGAA
CGACGACTATAGAAGTTACAATGAAGAGAACGAGAAGATTATGAGACGGC
AAGCCGACGAACAACGCAAGAAGAACGACTACTATAGACGTTACAATGAA
GAGAACGAGAAGATTATGAGACGGCAAGCCGACGAACAACGCAAGAAGAA
TAACGACTATAGACGTTACAATGAAGAGTACGAGAATCTCATGAGACGAC
AAGCCGACGAACAACAAAATGAAAACCTTCCAACACGTTGGATGAAAGAT
GAATATGATCGAATAATG Coding sequence (CDS) from alignment at sc0000356_pilon:235899..237566- >XLOC_036574 ID=XLOC_036574|Name=XLOC_036574|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2154bp|location=Sequence derived from alignment at sc0000356_pilon:235899..237566- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAAATTATATCGTTATTTTTTGCATCTTTTTGCATCAATGCTGTTTA
TTCCAAGTCTTTGAACGATAAAGATGATGAAAATTATATCGTTATTTTTT
GCATCTTTTTGCATCAATGCTGTTTATTCCAAGTCTTTGAACGATAAAGA
TGAAGATCAACAAAGCCATGGTAACATGGTTGGCAAAGGTCCATTTCGAA
TTCCACACAAGCGAGAATCTTACGGTATGATTGTCAAAAAAGAAAATGAA
GCAGAAGATCACACCTGGAAAGAAAGTACAAAACAAAATGGTCTTCAAAA
ACGAAAGGTTGAGACGTCAGGTTGGCTTGATATGAAGAAGAAGAAGAGAT
CAGGTGATGAGGAAGATGATTTCCAAAAACCAGGGATCGATGAAGTTAAG
GATAAAGCATTCATTCCAATGAAATTATACGCTTTATCCAGAAAACGAAG
TTTTGCAGCTGAAAATAATCCCATTTCAAAATGGTACAAAAGAGACAGCG
AAAATGGTAACCCAATTCATAAATGGTATAAGAGCGAAGTGAGAAATGCA
GATGATGATGTGAATGGGGAAATTTTCGAAGATAAATTGGAACAGGATCG
ACTTCCAACGCGATGGATGGATGAGCTTTCTCGATCGGGCACCAATCAAG
ATCTTGAAGATGAATATGAAATTAAAGAGCGCAATTTCAAAGAAGATGAT
GAACGAAAGATGAGACAAAACGGACTGCAAAAGAAAGATGACTATGGACA
ATATGATGTTGAGTACGAGAAGATCATGAGACGGCAAGCCGACGAACAAC
AAAAGAAGAACGACGACTATAGACGTTACAATGAAGAGAACGAGAAGATC
ATGAGACGGCAAGCCGACGAACAACAAAAGAAGAACGACGACTATAGAAG
TTACAATGAAGAGAACGAGAAGATTATGAGACGGCAAGCCGACGAACAAC
GCAAGAAGAACGACTACTATAGACGTTACAATGAAGAGAACGAGAAGATT
ATGAGACGGCAAGCCGACGAACAACGCAAGAAGAATAACGACTATAGACG
TTACAATGAAGAGTACGAGAATCTCATGAGACGACAAGCCGACGAACAAC
AAAATGAAAACCTTCCAACACGTTGGATGAAAGATGAATATGATCGAATA
ATGAAGATCAACAAAGCCATGGTAACATGGTTGGCAAAGGTCCATTTCGA
ATTCCACACAAGCGAGAATCTTACGGTATGATTGTCAAAAAAGAAAATGA
AGCAGAAGATCACACCTGGAAAGAAAGTACAAAACAAAATGGTCTTCAAA
AACGAAAGGTTGAGACGTCAGGTTGGCTTGATATGAAGAAGAAGAAGAGA
TCAGGTGATGAGGAAGATGATTTCCAAAAACCAGGGATCGATGAAGTTAA
GGATAAAGCATTCATTCCAATGAAATTATACGCTTTATCCAGAAAACGAA
GTTTTGCAGCTGAAAATAATCCCATTTCAAAATGGTACAAAAGAGACAGC
GAAAATGGTAACCCAATTCATAAATGGTATAAGAGCGAAGTGAGAAATGC
AGATGATGATGTGAATGGGGAAATTTTCGAAGATAAATTGGAACAGGATC
GACTTCCAACGCGATGGATGGATGAGCTTTCTCGATCGGGCACCAATCAA
GATCTTGAAGATGAATATGAAATTAAAGAGCGCAATTTCAAAGAAGATGA
TGAACGAAAGATGAGACAAAACGGACTGCAAAAGAAAGATGACTATGGAC
AATATGATGTTGAGTACGAGAAGATCATGAGACGGCAAGCCGACGAACAA
CAAAAGAAGAACGACGACTATAGACGTTACAATGAAGAGAACGAGAAGAT
CATGAGACGGCAAGCCGACGAACAACAAAAGAAGAACGACGACTATAGAA
GTTACAATGAAGAGAACGAGAAGATTATGAGACGGCAAGCCGACGAACAA
CGCAAGAAGAACGACTACTATAGACGTTACAATGAAGAGAACGAGAAGAT
TATGAGACGGCAAGCCGACGAACAACGCAAGAAGAATAACGACTATAGAC
GTTACAATGAAGAGTACGAGAATCTCATGAGACGACAAGCCGACGAACAA
CAAAATGAAAACCTTCCAACACGTTGGATGAAAGATGAATATGATCGAAT
AATG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000356_pilon | genome | sc0000356_pilon:235899..237566 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 79-1077:1000 |
| Aaloc | 1-75:1669 |
|
