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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000028_pilon:1974381..1977228- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_036524 ID=XLOC_036524|Name=XLOC_036524|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2848bp|location=Sequence derived from alignment at sc0000028_pilon:1974381..1977228- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGTTGTTGAAATTCGCTTTCGTGTTTTTGTTGGTTGTCTGTTTATT
GACAACAGAGGCTGATGCTAAGAAGAAGAAAAAGAAGAAAACGAAGAAAA
ACAAGAAGATCATTATTGACAATTTCAACCGAAGAACTACAACGACAACG
ACAACAACTGCAACTACACAAAACCTCCCTACAGAGCTTCCAATAACAGA
GTCACCAGAACTTCCCAAAGATGAAGGACCACAAATCTACGTATCTACTA
TTATTGTTATTATTATTATTCAATCTATATATGCCTTCCCATTCTAATTG
TTAGAGTAGGTAAAAAGTCAACAAAACAAAATTTTGCCCTGGAACTTTTT
GCAAAGAAATCATCAAGTATTCATAACTAGAATAGGCAGGATTATCGACG
GTCTAACTAGAGCTAAGTTACATCAACGAGCAACACTTTCCTCAAATCCT
ATCTCACTCAAGACAATCAAGAACTGAGATCACATTTCAATAGTGCGTTA
AGGCAGCTTGTAAGAGTATTTTATGTAAAACCCTGTCCCAATATTTTCGA
GCGGCATGTAAGTATTACCTTAATATTTATTCATGTTTAGGTTCCAGGAG
ATATTCTCGATAAATTATCCAATGCTCAAAACGATGTTACAAGTTTTGTC
AAAAGTTTCAAACCAGTTGGAGTCCAGCAAAAAGGTACAACGACTTATTT
AATCTCAAACTTTCGTCAAAAAACGCAAAAATAAACTTTCATAAACCAGT
CATTTTGGTTACCATTTTAATGATTTTTATTATAATTATTTAAAAGTTTC
TATCTCGCCTTTTCGAGATGTTGACGTACAGGGATTAATTTTCCTTCCCT
TGTAGGAAACGTGTTGAGTTACATTACTGGTGGTGAAAGCAATGAAGTTA
TCAAATGGGCCAGTACCAGTAAATATTCAAAAATTCATGATATTCATGAC
CTAATCTTTTCTACGGAAACACTTTGGTTTTGGCCAGTAATGGCCAAAGA
AACTTAAGAAACTTAAGCTAAAGAAAAATTTGCCACTAATGGTAAAAACC
GGGCTGTTTTTATAGAAAACGTTAGGTAATGAATATCATGAATAGAAAAA
TACGATTAAGCAAAAGTCAGTCTTTGTTACGAAAGAATGACACAATAGTT
TGTTGTTGTATTTTACCACGAAAAGTATGCAAACCCACAAAGACAATAAA
TTAGTCAAGGTGGATCTTTATCTAATTATCAGCTTGTAAATAATCATACT
ATATGGCTAAAATAGTCGAGTCACTGATCTCTTAAATATCTGACTTCACA
TTCCAAATATTTGACAATTTATCACAGGTGATACAGGGTGTAAACCAAGA
GAAAAACTTGAATGCATCGAAGAAAATAGTTACCTGGTATGGCCTGGAAT
TCAAAAAGTGATGCGATGTGGAGAGTGCTGTGTTTTACCAGGACAAGTAT
GCAAACCTACAAAGAAAAGAAAAGAATACCAATACTTCTTCAAAATCCCA
AGTGATGGTAAATAAGCTATTTGGGTGATTTTAAGTTCGGAAAATTCACC
AAGAATCATTCATTTAATTAATGTTAATGTTATAAAAGTAAAAATTAAAC
TTGCAAAGAAACTCTTCGAAAAAAAATATTTTAAATATCTGGACGAACTA
AGATCAGCCCCCCTCCTTGAAAAATGAAAAAACACTCCATTAGACCCCTG
GAAATGTTCGTCCACCCCCACCCCCTGTATGGATATAAAATGGAATGGCC
TATTGTCACTCTAAAATTCAGGAGAAATTTTTCTCGCAATGCCTAAAGAG
GTATTTCTTAAAGAATGTTATAACAACTGAAAATCATTTCTGACCTTCTT
TGTCTCGTCAGGTTCGCCTTGCGTCCCTATCAAACGTGAATTGACCCATC
ATGAAGCATGTGAATGCCAATGCAGAATTTCACCAAAAAACTGTACACAA
GAACAAACATTCAATAAACATCATTGCCAATGTGAATGCAATCTCAAGCC
ACAACCATGTCCACCAGGAAAAAGTGTAAGTCATTGTTTTGTAATTATTG
TTATCCTTTGAAACATTTAAAGTTGAATTGTTTAAAGTTGGAATCAAATA
TCATAAAAATGTAAATACCGGGTGTCCCAGAAAAAAGTCCCCCTATTTGA
AGTGAATTTTCTCGCGTTCTATGAACTGTTGAAGAAACGATTCATTTGCA
TTGAAAAGAGGAAGGATAGACTTAAAGTTTGAGGGGTCATTTTGTTAAAT
TTGGTCAACTAGATAAAAAGTTGTGGCCTAAATGCTAAAAATTTACTTAA
AAAAAAAAAGTTAAAAAAAAGCGAAATTTGACAGACAAACCCTCAAAATT
TATTTTTATCCTTCCTCCTTCCAATGCAAAAGGATCGATTCTTTAACAGT
TTACCGAACTCAAAATAATTCACCTCAAAGAGGGGACTTTTTTCTGAGAC
ACCCGGCACCTTTTTAATACACATAATTCTTTCACATGTTTCTCGCAAGG
CTAGTTGAACAGGTTTTAGGAATTTTAAAGGATCTTGCAAATTTCGTTGC
ACTTTCGGAGGCTCAATTCGGTTTTAATGGCATCCTACTATCAGTTCTGT
TTTTTTTCTAAAGATTCAATGGAATTATTGTTTAAAAATTTGAGCATGTC
TTACAAGCCCTCATTTCTTTGCAGTGGTCATATCATACATGTGGCTGTGC
TTGCAATGATAAAGAAAGAGCCTGTCTAAAGCTATCAAGAAAGATGATCT
GGGATGACCGCAATTGTGAATGTGTTTGTAACAAAGAAAAAGAAGCTTGC
ACAGAACGTGGAAAATTACTGGATATGTCTGATTGCAGGTGCAAATGA Coding sequence (CDS) from alignment at sc0000028_pilon:1974381..1977228- >XLOC_036524 ID=XLOC_036524|Name=XLOC_036524|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1830bp|location=Sequence derived from alignment at sc0000028_pilon:1974381..1977228- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGTTGTTGAAATTCGCTTTCGTGTTTTTGTTGGTTGTCTGTTTATT
GACAACAGAGGCTGATGCTAAGAAGAAGAAAAAGAAGAAAACGAAGAAAA
ACAAGAAGATCATTATTGACAATTTCAACCGAAGAACTACAACGACAACG
ACAACAACTGCAACTACACAAAACCTCCCTACAGAGCTTCCAATAACAGA
GTCACCAGAACTTCCCAAAGATGAAGGACCACAAATCTACATGAAGTTGT
TGAAATTCGCTTTCGTGTTTTTGTTGGTTGTCTGTTTATTGACAACAGAG
GCTGATGCTAAGAAGAAGAAAAAGAAGAAAACGAAGAAAAACAAGAAGAT
CATTATTGACAATTTCAACCGAAGAACTACAACGACAACGACAACAACTG
CAACTACACAAAACCTCCCTACAGAGCTTCCAATAACAGAGTCACCAGAA
CTTCCCAAAGATGAAGGACCACAAATCTACGTTCCAGGAGATATTCTCGA
TAAATTATCCAATGCTCAAAACGATGTTACAAGTTTTGTCAAAAGTTTCA
AACCAGTTGGAGTCCAGCAAAAAGGTTCCAGGAGATATTCTCGATAAATT
ATCCAATGCTCAAAACGATGTTACAAGTTTTGTCAAAAGTTTCAAACCAG
TTGGAGTCCAGCAAAAAGGAAACGTGTTGAGTTACATTACTGGTGGTGAA
AGCAATGAAGTTATCAAATGGGCCAGTACCAGAAACGTGTTGAGTTACAT
TACTGGTGGTGAAAGCAATGAAGTTATCAAATGGGCCAGTACCAGTGATA
CAGGGTGTAAACCAAGAGAAAAACTTGAATGCATCGAAGAAAATAGTTAC
CTGGTATGGCCTGGAATTCAAAAAGTGATGCGATGTGGAGAGTGCTGTGT
TTTACCAGGACAAGTATGCAAACCTACAAAGAAAAGAAAAGAATACCAAT
ACTTCTTCAAAATCCCAAGTGATGGTGATACAGGGTGTAAACCAAGAGAA
AAACTTGAATGCATCGAAGAAAATAGTTACCTGGTATGGCCTGGAATTCA
AAAAGTGATGCGATGTGGAGAGTGCTGTGTTTTACCAGGACAAGTATGCA
AACCTACAAAGAAAAGAAAAGAATACCAATACTTCTTCAAAATCCCAAGT
GATGGTTCGCCTTGCGTCCCTATCAAACGTGAATTGACCCATCATGAAGC
ATGTGAATGCCAATGCAGAATTTCACCAAAAAACTGTACACAAGAACAAA
CATTCAATAAACATCATTGCCAATGTGAATGCAATCTCAAGCCACAACCA
TGTCCACCAGGAAAAAGTGTTCGCCTTGCGTCCCTATCAAACGTGAATTG
ACCCATCATGAAGCATGTGAATGCCAATGCAGAATTTCACCAAAAAACTG
TACACAAGAACAAACATTCAATAAACATCATTGCCAATGTGAATGCAATC
TCAAGCCACAACCATGTCCACCAGGAAAAAGTTGGTCATATCATACATGT
GGCTGTGCTTGCAATGATAAAGAAAGAGCCTGTCTAAAGCTATCAAGAAA
GATGATCTGGGATGACCGCAATTGTGAATGTGTTTGTAACAAAGAAAAAG
AAGCTTGCACAGAACGTGGAAAATTACTGGATATGTCTGATTGCAGGTGC
AAATGATGGTCATATCATACATGTGGCTGTGCTTGCAATGATAAAGAAAG
AGCCTGTCTAAAGCTATCAAGAAAGATGATCTGGGATGACCGCAATTGTG
AATGTGTTTGTAACAAAGAAAAAGAAGCTTGCACAGAACGTGGAAAATTA
CTGGATATGTCTGATTGCAGGTGCAAATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000028_pilon | genome | sc0000028_pilon:1974381..1977228 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 742-915:175 |
| Aaloc | 580-741:986 |
| Aaloc | 400-576:1520 |
| Aaloc | 337-396:1992 |
| Aaloc | 241-333:2259 |
| Aaloc | 1-240:2849 |
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