XLOC_036513 (mRNA) -

Overview
NameXLOC_036513
Unique NameXLOC_036513
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000060_pilon:560572..561747-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_036513 ID=XLOC_036513|Name=XLOC_036513|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1176bp|location=Sequence derived from alignment at sc0000060_pilon:560572..561747- (Clytia hemisphaerica_ch_hm2_pilon)
CTCATTTTATTTTCAGAAAAAATGAATATTACAATTAAGTACTCAAAAAA TCTGGAACCTTTGACAATTTCAAATGATGATGTGAAATCATTGGATGAAT TGAAGCTTAGAATTGAAGAAACAATTCAGCTGCCAGGACATCTTCAACAC TTTGCTTTAGAAGAGACATCTATATTTGTGACATCCAACAATTTTCATGA ACTTTTCTTCAAAAAAGAGAAGATTGTTTTGAAATTATTTTGTGCTGGCA CAGAAGACTCAAAAATCATCAAAATATGTCAAGATCTTGAGATGAATGAT GAAATTATTGAGATGTGGATGGTCTTAGGTTCTTTTCACTTCAATTTTCC CATCAAACTGGATTCTAAAATAACAGATGCAAGAAGGAGCTTAGATGAAA ATGGTTTCTCAAGTAAAGCAAGTTTGTTTTATCCGTCTAATTATCTTGAT CTTGCGCTGCCCATACTTCCTCTTTCAGATGATCAATTCCTAGTGGATTT GTTCTTTCAAAGAGATGAATTCCAAACTGATTATCATTTGATTAAATTGG AAAAATTTATGGGAGGCAATTGCATGGGAGATTGTATACGAAATATTGTT ATACGCTCATACATTAATGAGGATAGAGTCTTTGAGTTGCACCTAAATGA AAAGGTTATCATTGATACTGTTGCTGTCAAGGAACGTATCATGGAAGAGA TTGGTATACCAGTGCACCTACAAGCCTATTGTTTTGAAGCAGATAGCAAC TTTCTGAAAGATACTTGCTTGGTCAGTGAATTTAATACTCAGTGCGAATG GGAAGGTTATGATCCTGCAAATATAGATCTTCGTTTGTTTGTGCTACCCA CAAAGGATGAAAAGATCATCCAAATTTGCGAAGATTATAACATTTTCATG TTCCAACCAGTTGCTTTATTTAATAACAAAAATAAGATTGTAGAGTACAA TTTTGACAAACATTCTAGTACCTTTGCAGATGCTTTAAGTATCATGATCA AAGAGGCTAAGTTACCTGAGTCTGCTGATTTCAGATGTTACATTAGAGGT AACGAGGTTGAATGTAATTCGTTTATACTATTTCGCGATTCGCGTTTTGA CTTCGTACGAAGTGGGCGTAAGAAATTGAACTTTTACAAACTTGAATTTG AACTTTTACAAAATGGAGAATCATGA

Coding sequence (CDS) from alignment at sc0000060_pilon:560572..561747-

>XLOC_036513 ID=XLOC_036513|Name=XLOC_036513|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2352bp|location=Sequence derived from alignment at sc0000060_pilon:560572..561747- (Clytia hemisphaerica_ch_hm2_pilon)
CTCATTTTATTTTCAGAAAAAATGAATATTACAATTAAGTACTCAAAAAA
TCTGGAACCTTTGACAATTTCAAATGATGATGTGAAATCATTGGATGAAT
TGAAGCTTAGAATTGAAGAAACAATTCAGCTGCCAGGACATCTTCAACAC
TTTGCTTTAGAAGAGACATCTATATTTGTGACATCCAACAATTTTCATGA
ACTTTTCTTCAAAAAAGAGAAGATTGTTTTGAAATTATTTTGTGCTGGCA
CAGAAGACTCAAAAATCATCAAAATATGTCAAGATCTTGAGATGAATGAT
GAAATTATTGAGATGTGGATGGTCTTAGGTTCTTTTCACTTCAATTTTCC
CATCAAACTGGATTCTAAAATAACAGATGCAAGAAGGAGCTTAGATGAAA
ATGGTTTCTCAAGTAAAGCAAGTTTGTTTTATCCGTCTAATTATCTTGAT
CTTGCGCTGCCCATACTTCCTCTTTCAGATGATCAATTCCTAGTGGATTT
GTTCTTTCAAAGAGATGAATTCCAAACTGATTATCATTTGATTAAATTGG
AAAAATTTATGGGAGGCAATTGCATGGGAGATTGTATACGAAATATTGTT
ATACGCTCATACATTAATGAGGATAGAGTCTTTGAGTTGCACCTAAATGA
AAAGGTTATCATTGATACTGTTGCTGTCAAGGAACGTATCATGGAAGAGA
TTGGTATACCAGTGCACCTACAAGCCTATTGTTTTGAAGCAGATAGCAAC
TTTCTGAAAGATACTTGCTTGGTCAGTGAATTTAATACTCAGTGCGAATG
GGAAGGTTATGATCCTGCAAATATAGATCTTCGTTTGTTTGTGCTACCCA
CAAAGGATGAAAAGATCATCCAAATTTGCGAAGATTATAACATTTTCATG
TTCCAACCAGTTGCTTTATTTAATAACAAAAATAAGATTGTAGAGTACAA
TTTTGACAAACATTCTAGTACCTTTGCAGATGCTTTAAGTATCATGATCA
AAGAGGCTAAGTTACCTGAGTCTGCTGATTTCAGATGTTACATTAGAGGT
AACGAGGTTGAATGTAATTCGTTTATACTATTTCGCGATTCGCGTTTTGA
CTTCGTACGAAGTGGGCGTAAGAAATTGAACTTTTACAAACTTGAATTTG
AACTTTTACAAAATGGAGAATCATGACTCATTTTATTTTCAGAAAAAATG
AATATTACAATTAAGTACTCAAAAAATCTGGAACCTTTGACAATTTCAAA
TGATGATGTGAAATCATTGGATGAATTGAAGCTTAGAATTGAAGAAACAA
TTCAGCTGCCAGGACATCTTCAACACTTTGCTTTAGAAGAGACATCTATA
TTTGTGACATCCAACAATTTTCATGAACTTTTCTTCAAAAAAGAGAAGAT
TGTTTTGAAATTATTTTGTGCTGGCACAGAAGACTCAAAAATCATCAAAA
TATGTCAAGATCTTGAGATGAATGATGAAATTATTGAGATGTGGATGGTC
TTAGGTTCTTTTCACTTCAATTTTCCCATCAAACTGGATTCTAAAATAAC
AGATGCAAGAAGGAGCTTAGATGAAAATGGTTTCTCAAGTAAAGCAAGTT
TGTTTTATCCGTCTAATTATCTTGATCTTGCGCTGCCCATACTTCCTCTT
TCAGATGATCAATTCCTAGTGGATTTGTTCTTTCAAAGAGATGAATTCCA
AACTGATTATCATTTGATTAAATTGGAAAAATTTATGGGAGGCAATTGCA
TGGGAGATTGTATACGAAATATTGTTATACGCTCATACATTAATGAGGAT
AGAGTCTTTGAGTTGCACCTAAATGAAAAGGTTATCATTGATACTGTTGC
TGTCAAGGAACGTATCATGGAAGAGATTGGTATACCAGTGCACCTACAAG
CCTATTGTTTTGAAGCAGATAGCAACTTTCTGAAAGATACTTGCTTGGTC
AGTGAATTTAATACTCAGTGCGAATGGGAAGGTTATGATCCTGCAAATAT
AGATCTTCGTTTGTTTGTGCTACCCACAAAGGATGAAAAGATCATCCAAA
TTTGCGAAGATTATAACATTTTCATGTTCCAACCAGTTGCTTTATTTAAT
AACAAAAATAAGATTGTAGAGTACAATTTTGACAAACATTCTAGTACCTT
TGCAGATGCTTTAAGTATCATGATCAAAGAGGCTAAGTTACCTGAGTCTG
CTGATTTCAGATGTTACATTAGAGGTAACGAGGTTGAATGTAATTCGTTT
ATACTATTTCGCGATTCGCGTTTTGACTTCGTACGAAGTGGGCGTAAGAA
ATTGAACTTTTACAAACTTGAATTTGAACTTTTACAAAATGGAGAATCAT
GA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_036513XLOC_036513-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000060_pilongenomesc0000060_pilon:560572..561747 -
Properties
Property NameValue
Aaloc1-1176:1177