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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000275_pilon:280302..284805- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_036506 ID=XLOC_036506|Name=XLOC_036506|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4504bp|location=Sequence derived from alignment at sc0000275_pilon:280302..284805- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCATCATGGTTACCTATACCGTTCCGCGTTGTCATACTGGGCGGAGG
ATTATCTGGTCTGGCGGCCGCCCACACTGTTCTCAAACATGCTCAAGTAC
CGACGCAAGTGACCGTTATTGAGTCACAAAATCGGTTTGGAGGCTGGTTA
GAAAGCACAAGATTCAATGATGGTACAGTATTTGAACATGGGCCAAGAAG
TGGACGTTCTTATGGGAATGTGGCTTTGGATGCTCTGTCTCTGGTGAGTT
TTACCACAATTTTCTGATCCTGTTAGCCTAATCTCCGAGCTATGTTATGA
GGTTGCAGTTATCAACAAAAATACAAAATTCAATATACAAACAAGTATAC
TAAATAGGTTTTAATATAGACGATGCTATCGTTCGTTTAGAGGGTCAGTA
AACGCGAGAAAATATATGCGCAGAGTCAGGGCGTCAGGGCGGTATAGTTT
TGGAACACTGTAAACACCTCCGCCCCGAACTAAACTCGTTTTCAAATTTA
TCCCGCTTCCTAAAATTCCCTTTTTCAATGATAGACGGTAGGATCGTCTA
GTTTTAATATAGATAAATAAATAAATAAATATTTCATTCAAATGTCTAAA
TCATTAGAGATAAGGCAAAGCCAACTGTGTCATCATCAACAGTTTTAATA
TCACCTCGGAAACCTATCGTTTGGCAAGTTAAAACATGCTGAGGGGTTTG
TATTTCGCCACACATACAGTTGGGATTATTGCTCAGACCTATCCGATGCA
TAAAACTACCATATCAAAATTCAATAAGTTGTATCGAAGGAGTCATTATT
ATGAAGTTTCCATATCTTGAACATTGTATAGGGAAAGCTCATCTTTCGTG
TAGCGTTTTGTTGTGTTTACTTTCATTTTGTTCTCGTTTTGTTTTTTTAT
ACAATTTATTTTAAGTCTTTTCCATATTTTCAGCTCTCGGATATCGGCAT
TGACGACAAATTTATCGGTGTACCGAAAAGTAACGACGCCGCTTCACGAA
GATATATTTATTACAATGGACAAATCTTAGAATTACCCAGAGGACTGGCA
CTAGCTAAAAAGTGGGGTCCACTCCCTAAGTCTTTACTCGGTTTGATGAT
ACGTGAACCTTTTGTGAAGAAATCTGATTTGGATGATATGTCGGTCCATG
AATTCTTCAGAAGAAGATTTAACTGCGAAGAGGTTTGTAGTTCCAACAGG
ATAAATATTTCATTGGGGCCCCATTTCATATTTTTGAAAATTTACTTAAC
CCCCCCCCCCCCTGATAGAAAAAGTATCAGGTATAAAAAATTTCACTAGA
GTCCAGAGGTACCTGGGCAGAAAAGGGGCACTTGGGGCACAGCGGTACTT
AGTTGTACCAGTGGTACTTAGTTGTTGTACCACTGTTGGGGGGGGGGGTA
AGTGTAACTTTTAATGTTCATTTTTCAATCTAAGTGGTATAAACACTAAT
GTTATTCCCCAGCCCTCTTAGAACTCAAAAGAAATAATATGATACTTTGT
ATTCCTTACAGATCGCCGACTACCTTGCCGACCCATTATGTCACGGTATT
TTCGGATGGGACTCCAAACAGTTGAGTTTGCGATCATGCTTTCCAATGCT
GTTTGATTACGAGAAAAATTATGGATCGGTCGTTAAAGGTGCTCTTTTGT
CCAAGGGTAAGTTTTCATTTATTCATAATATTCATGAGGTAATGTTCTCT
ACGGAAAAACCTCGCGTTTTAGCCAGTAATGGCAAATTTAAACTAGGCAA
AAGTTGTATAAAATTTGCCATTACTGGCTAAAACCGGGGTCTTTCCGTAG
AAAATATTACGTCATCAATATCATGAATTTGAAGCATCAAGCGTGGTAGA
AAATATGTACGGTTAGGTCAAGGATTTATTATAGAGACTCTGGATAAACA
TTTTACTTTTTATTAATTTCATTTTAAAAAAGTTCTCTAGCTCTTTCTTT
TTGTACCTTTGCAGGGAAAAAGTTTGATAGTACGGCTAGAATTGCTGATT
GCATTTGTGAAATCTGGCGTGAGAGAAATATCCTTAGACAAGAAAAATCC
GAATGCTTATAGAGTAACGAAATTTTCAATTGGGAATATCTTTCCAAAAC
TGTTGCCAGAAGAGCTAAAAGTAACATACTTTAGACTTGGGTGTCTTAGC
TCCACTGTGATGTGAAAATCTTTCGGAGGCACGTGCTGGCAAAGTGGTTT
TTTAAGGTTGAAGATTAAAACTTTCCGGTTTCAACATTTAATTTCTTATA
CATAACACGTCTTTTGTATCTTTCTCACAAATTAAAACGCCATAACGACA
TATAATTGGCAATTAGATAGAATCTGACTCTCACAGGAAAGTCTCCTTTG
GGAGTTGGATGAGTGATTTTCGATAAAATATGCAATTAAAATGTTTCGAA
AAATCATTTAATGAGGGAAGGAGAGTGAACAATTATATCATTACTGTGGA
TATAGCTAGAACTTGAGAAATCAGCAAAAATCAGGTACTTGTATCATGAA
ATGTCATGAAGGTAATACAGATATATTTCTTATTACCTCTATGCTTATCC
AGTATATAATAATTCCTTGGTTAGGTCACGACTTGGTGTTTGTTGAGAAA
GAATCGTTCCCTTTAAGACAATAGGGACCTTTAGCATCTAGGACGGCAGA
TTTATAGATTGTGCGCATATCTGGATGAGTTTTTGATTTAACAAAATATC
CGAAAGATACTTGCAGTGTAATAAAAACCTTAATCGCACGATGGGTTATT
TTTTCTTATTTGGCACGCCCTCAAAGAGAGCAATTAATCGTTGATTGCAT
CCTGTAGAGAGTAATTAATCGTTAATCACACTCTTCAATGCTGCGCCAAT
GTTTACAAAAATGATTTTAATGTTTTTTCTTACATTTCTAATGCATCGAA
CGTTTTAACTGCATTCGAAATTCATTTTTTGAGAACGAAAATCAATAAAC
AACAATAAAAGAAAGACACAGAGAGAAGAGAAAAATATAAAACTCTCAGT
GTAATTTCTGTAATTTACTTTCCTAACTGGGAAAAAGTAGTGAAAGCCAT
TGTGCGATTAGCTCGTAATCACATAATAACTCGTACAATTCGAAATTGCA
CTTGTGATTTTTTTGTTTCGAATTTTCCTCGTCCTTTCGGACTCGGAAAA
TTAATAACAAAAAAATCACTCGTGCAATTATATTCGAATTGCACTCGTTA
TCATGTGATTACATATACTAATGATACTATTTGACACAAAATCCAAAAAA
TTATCTAAGCAACATTTTTTTTTTGCTTCTCAATTTTGAATTTTAATTCT
TCGTTAAAGTCAAACTTATTTTTTTTCATTTGACAGGTAACAAGCCACCA
ATTAGTTCATTGTCAAATAAAGCCAAAGAACAACAATGGATGGCATGGTC
GGTCAAAGGAGGCATGCAAACGTTGCCAGAATTATGGTCACAACATTTGA
TTGAGAAAGGCCTGCAATGTCATCTTAATACAGAGTGCAAGAAACTAAAG
GTTGAATTCACTACGGATAGTCGTAAATTTCATATCGAGACAAACAATGG
AACATTCGAGGCTGACCACGTGATCTCTACGCTTTCGGCTCCCGTACTTT
TAGACATGATCGAAGATCAAACATTACGTCACCTGCTACAAGATATTCGG
TATACTAATATGGCGGTCATGACTTTACAATATAGCGGAGAAAAAATTCC
GCATAGTGGGTTTGGATATTTAGTGCCGTCTAAAGAAAAACTGGATATTT
TAGGAGTGACTTTCGATTCGCATATCTTTCCAGAGCATGCGTTAGAAAAT
AGTTCAACTGTGACGGTCATGGCTGGTGGGCCTCGTTTCCATGAACTTTT
TGGTGAAAAGGCAGACGAAAATACGGCGACGGAAATAGCCGTTCGTTCTG
TTCGCGATACGTTGAATTTCAAAAGTGAGCCAATCAAAAATGTGACAAAA
ATGCATCGACACTGTATACCGCAATACCATGTCGGTCATTACAAAACAGC
TGAAAATATCCAGAACTATTTATTGGAACAAAACTTACCGCTAAGCATCA
TGGGTAACATGTGGGGAGGTCCGGGCGTGAATGACGTCATCGTGAATGCA
AGAAATAACACGATGACGTGGTTGACCAATAATCATCTTTGCTGAAAATT
TATTTGTAGGGATTTAATTTTAATTTACGCTGAATCTTTTGCCTTTTTTG
TGTCTACATATGTTCGAATATTTTAAAGATTTTCTTTTTACATAAGTGGT
TCCGTTTTATATCAGACACATATTTCATATCAGGACAGTGTCTTGCTAAT
TGTTATATTATGCTGATATATTATTATTATTATTATTATTAAAAAAAATG
AATATTACAGGTTGTAGGCACTCAGTGGGCCTCTAAACCGATCTCAATTT
ACAAATTTCGTGTAACGAATTTCTTTGGATGGCTTTTCCATGCTTCTTTC
AACTTTTCTTTGAAGCCTTTTATGGAAACAGCAGCTACCACCTCAGACGG
CAAT Coding sequence (CDS) from alignment at sc0000275_pilon:280302..284805- >XLOC_036506 ID=XLOC_036506|Name=XLOC_036506|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1914bp|location=Sequence derived from alignment at sc0000275_pilon:280302..284805- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCATCATGGTTACCTATACCGTTCCGCGTTGTCATACTGGGCGGAGG
ATTATCTGGTCTGGCGGCCGCCCACACTGTTCTCAAACATGCTCAAGTAC
CGACGCAAGTGACCGTTATTGAGTCACAAAATCGGTTTGGAGGCTGGTTA
GAAAGCACAAGATTCAATGATGGTACAGTATTTGAACATGGGCCAAGAAG
TGGACGTTCTTATGGGAATGTGGCTTTGGATGCTCTGTCTCTGATGTCAT
CATGGTTACCTATACCGTTCCGCGTTGTCATACTGGGCGGAGGATTATCT
GGTCTGGCGGCCGCCCACACTGTTCTCAAACATGCTCAAGTACCGACGCA
AGTGACCGTTATTGAGTCACAAAATCGGTTTGGAGGCTGGTTAGAAAGCA
CAAGATTCAATGATGGTACAGTATTTGAACATGGGCCAAGAAGTGGACGT
TCTTATGGGAATGTGGCTTTGGATGCTCTGTCTCTGCTCTCGGATATCGG
CATTGACGACAAATTTATCGGTGTACCGAAAAGTAACGACGCCGCTTCAC
GAAGATATATTTATTACAATGGACAAATCTTAGAATTACCCAGAGGACTG
GCACTAGCTAAAAAGTGGGGTCCACTCCCTAAGTCTTTACTCGGTTTGAT
GATACGTGAACCTTTTGTGAAGAAATCTGATTTGGATGATATGTCGGTCC
ATGAATTCTTCAGAAGAAGATTTAACTGCGAAGAGCTCTCGGATATCGGC
ATTGACGACAAATTTATCGGTGTACCGAAAAGTAACGACGCCGCTTCACG
AAGATATATTTATTACAATGGACAAATCTTAGAATTACCCAGAGGACTGG
CACTAGCTAAAAAGTGGGGTCCACTCCCTAAGTCTTTACTCGGTTTGATG
ATACGTGAACCTTTTGTGAAGAAATCTGATTTGGATGATATGTCGGTCCA
TGAATTCTTCAGAAGAAGATTTAACTGCGAAGAGATCGCCGACTACCTTG
CCGACCCATTATGTCACGGTATTTTCGGATGGGACTCCAAACAGTTGAGT
TTGCGATCATGCTTTCCAATGCTGTTTGATTACGAGAAAAATTATGGATC
GGTCGTTAAAGGTGCTCTTTTGTCCAAGGATCGCCGACTACCTTGCCGAC
CCATTATGTCACGGTATTTTCGGATGGGACTCCAAACAGTTGAGTTTGCG
ATCATGCTTTCCAATGCTGTTTGATTACGAGAAAAATTATGGATCGGTCG
TTAAAGGTGCTCTTTTGTCCAAGGGTAACAAGCCACCAATTAGTTCATTG
TCAAATAAAGCCAAAGAACAACAATGGATGGCATGGTCGGTCAAAGGAGG
CATGCAAACGTTGCCAGAATTATGGTCACAACATTTGATTGAGAAAGGCC
TGCAATGTCATCTTAATACAGAGTGCAAGAAACTAAAGGTTGAATTCACT
ACGGATAGTCGTAAATTTCATATCGAGACAAACAATGGAACATTCGAGGC
TGACCACGTAACAAGCCACCAATTAGTTCATTGTCAAATAAAGCCAAAGA
ACAACAATGGATGGCATGGTCGGTCAAAGGAGGCATGCAAACGTTGCCAG
AATTATGGTCACAACATTTGATTGAGAAAGGCCTGCAATGTCATCTTAAT
ACAGAGTGCAAGAAACTAAAGGTTGAATTCACTACGGATAGTCGTAAATT
TCATATCGAGACAAACAATGGAACATTCGAGGCTGACCACAATTTCTTTG
GATGGCTTTTCCATGCTTCTTTCAACTTTTCTTTGAAGCCTTTTATGGAA
ACAGCAGCTACCACCTCAGACGGCAATAATTTCTTTGGATGGCTTTTCCA
TGCTTCTTTCAACTTTTCTTTGAAGCCTTTTATGGAAACAGCAGCTACCA
CCTCAGACGGCAAT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000275_pilon | genome | sc0000275_pilon:280302..284805 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 871-957:88 |
| Aaloc | 640-870:1167 |
| Aaloc | 493-636:2994 |
| Aaloc | 244-492:3572 |
| Aaloc | 1-243:4505 |
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