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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000060_pilon:549708..552689- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_036503 ID=XLOC_036503|Name=XLOC_036503|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2982bp|location=Sequence derived from alignment at sc0000060_pilon:549708..552689- (Clytia hemisphaerica_ch_hm2_pilon)
AGAAATCACATAAAAATGAGTAAAACTAAAAAATATAAAAAAGCAAAATC
CAAAGCCAACAAAGACAAAGAAGACACATCAATTCAAGAAATTACTATAA
ACGACCAGTCATTTACTGATTTCCTTTGTCCAATATGTTTGGAGATCTTA
ATTGAGCCTGTTCAAATGCCTTGTAAACACGAACTATGTACTCAATGTTT
CAAATCTCATGTTGAAGACACCAGTTTATCTTGTCCTATGTGCCGACAAA
GAATTTCAATATGGGTTAGAAGGAATGCTAAAAACAATACGTTAGTGAAC
CAAGAAAGATGGGCCTTGATCCAATCTATGTTTCCAGAACGTGTCCAACG
TCGTTTAGATGGATTGGATGATATCGAAGATCAAGACAATTTTGGTTTGT
GTTTATAAGAACACTGAACTCATAAAAATAGACTGGGATGGATTGAATTC
TCAATGTACCTCTATTGACCTAAGTGATAAAGACTAGGGGATTAGGTTTT
ACTCTAATAATGCAGGACTGAATAATGCTTTATGTATTATCTGAGCTAAA
TGTTTCACAGTTCTTGCTACGCTTCTGACTAAAAAATCCAGGGATGGAGA
TTACTAGAGATATCCATTCCTGTCCCTATTTTTATAGTTCGATGGTATAA
CATCATGTAAATATTTAATTATTGGTTCTGATTGGTTGACAAATACGCTC
TTTTTTTATTGAACAATCATACTAAAAAATGCCAAAAATAAGAACAATTT
TAAAACAACCCCAATTTTAAGCAAGATAAGAATCAAAACAGTAAAATAGG
GTATCAAGCCAGAAAAGACACAAATTTGATCTTAAAAACATGATCAGAAC
AATTCGAGGCAAAAGTGTCAAAAGAATAAGAGTCGAAACAATATAAATCG
TGCCTCAACAAAAATTAGCTGGTTCTTTAAAAAAAAGAGTGTATACTGTT
TCATATTTTCATCCTATCTGTTCTTTTATTCAATTATATTTTATTTCAGC
CCAAAATTTCAATGCAAATAATTATAATCAATGCAATTAAAAAGGTTTGG
TAAAAGGTGTTTCTCAAATGGGTTAGTCTGAACTAAGGTAAGAAGTTTGT
AACAACAAAGCAAATTATTGATCTTTATGTTATGTCTTTTTTGCATATTT
CATTTACAGTACCACATCATAACATTGCAGAGGAAGGAGAGGTGAGAAAA
GAATTTGAAGATCAAATGAAAAAAGTAAGTTTTCTAGTTCTGTCATGTCA
CTTGCAAAACAAGTTGGATTAACCAATTTTTTTTCGAAATCAATTCCTTA
GCCGGATGTTTCGTTTCTGGGGATGCTTATAAGTAGTTTTAGTTGTGAAA
AATACTGACGACCTGCACTTAACACTTAACATTTGATTTAGTATTCATTT
CAAGTCTGGGACCAAAACATGTTGATAACTTTAGTTTGCTTAAGGCTTTC
TCTTGATATTCAAGAGATTTTCATGTCTTGAGGCCTTTCATATTCATGAT
ATTCGTGAGGTAAATGTTTTATATGGAAGCACTCAAAATAGCCCAGGCGT
TTACCACAAGTTTCTTTGTTTCAATCCGAAATTATTGGCAAAGACCGGGT
CTTTTTGAGTGCTTCTGTATAAAACAATACGCCATATGAAAATCACGAAT
ACAGTGGAGTTCACTACTCGAACACGCACGAGGAACACAAATTTGTTCGA
CTTATGGAGTAAGGTTTATAAGCCATCGTTAACTGAAGGGACCATAAAAC
TTGTTCGAGTTAAGAGACATTTCGATGTGAAGTATAAGGTTTATAAGGCA
TTGTTAACTGAAGGGACCATAAAACTTGTTCGAGTTAAGGAGACATTCGA
GCTATAGAGGTCCGAGTTACAGAAACTCTACTTTAATAACATTGTTTATT
AGATCGAAGAAGAACGAGCGGTGATAGATGCAGCGGATTTGGAATACATC
AGGAAGTTGACGGAAGAAGATAACAAGGAGCGACAGAGACAAGAAGAGTT
GGATATGAAGGCTGCCCACGAGTTGCAGAAACAAGAAATGGCCAACCTTG
GTAAAGGGGATGGGACGATTAATAATTGTTTGAAAATTTAGATCTTCCTA
CTCAAAAAAAGTCTCTTTTATCGTAGTCGCTGGTTTTGAAATTAATACAC
TGTATGAATCATTATTATCATCACTTTCTGCACAATGTTTAGGTTTTTCT
TATGCTGTTCTGACTTAAATCCAACCTGTTCAACCTGTTCTTTCTATAGT
GACTTCATATTTTTTTTTTCTCTCCAAGGTGTAACATTGAAATCACCCAG
TGAACATCAACGCTCATTGCTAGCATTATTGAAACCTAAATCACCAATGA
AATTGCGACGCCGAAGTATCCCTAACAAACAAGGGAGTAGTTCTTCATCC
AAATCGAAAGCGACTCGTAACATATTGACGTCACCAAACCACACGATTAC
ATCATTTTTCCAGAAATTGGAGCACAAAAACGAACCGAATAATACTCAAC
AAAATATTAATGATATAAAAAATAGCAGTAAAACGAATAGTAGAAATTGT
AATGGAACGAATTCAGGAAATCCCAATGATAGTTTGAATGGTAGTCTTCG
AATTGAAAGAAATTTAGTATCAACTTCCAGCGACAAACAAGGAGTAAACT
CGACTTCCATGGACAACATTTCTTCGTATTCTAGTAGTACTGTAACTCGA
CCCACTCCGATTCAAATCGACTTAGACGAATCGATAACTGAAGACTCTGA
TCGGGAACTAGCCGAACGATTACAACGCGAATACGACCAGCAATGGCAAA
ATAATAACATTGTAATTACGCCTCAAAAAACACCTTTACGAGCCACAGAT
AACCTTATTAGAATTGATACCGAATCGAAGTCATCGAAAATTGACCGACT
GAAATCGATTCGTAAGCGAAACGATGATTTATCGATATCTTTGCATGATG
TGGTCCCATCGAAAGCGAGGAAAACGCGTTAG Coding sequence (CDS) from alignment at sc0000060_pilon:549708..552689- >XLOC_036503 ID=XLOC_036503|Name=XLOC_036503|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2622bp|location=Sequence derived from alignment at sc0000060_pilon:549708..552689- (Clytia hemisphaerica_ch_hm2_pilon)
AGAAATCACATAAAAATGAGTAAAACTAAAAAATATAAAAAAGCAAAATC
CAAAGCCAACAAAGACAAAGAAGACACATCAATTCAAGAAATTACTATAA
ACGACCAGTCATTTACTGATTTCCTTTGTCCAATATGTTTGGAGATCTTA
ATTGAGCCTGTTCAAATGCCTTGTAAACACGAACTATGTACTCAATGTTT
CAAATCTCATGTTGAAGACACCAGTTTATCTTGTCCTATGTGCCGACAAA
GAATTTCAATATGGGTTAGAAGGAATGCTAAAAACAATACGTTAGTGAAC
CAAGAAAGATGGGCCTTGATCCAATCTATGTTTCCAGAACGTGTCCAACG
TCGTTTAGATGGATTGGATGATATCGAAGATCAAGACAATTTTGAGAAAT
CACATAAAAATGAGTAAAACTAAAAAATATAAAAAAGCAAAATCCAAAGC
CAACAAAGACAAAGAAGACACATCAATTCAAGAAATTACTATAAACGACC
AGTCATTTACTGATTTCCTTTGTCCAATATGTTTGGAGATCTTAATTGAG
CCTGTTCAAATGCCTTGTAAACACGAACTATGTACTCAATGTTTCAAATC
TCATGTTGAAGACACCAGTTTATCTTGTCCTATGTGCCGACAAAGAATTT
CAATATGGGTTAGAAGGAATGCTAAAAACAATACGTTAGTGAACCAAGAA
AGATGGGCCTTGATCCAATCTATGTTTCCAGAACGTGTCCAACGTCGTTT
AGATGGATTGGATGATATCGAAGATCAAGACAATTTTGTACCACATCATA
ACATTGCAGAGGAAGGAGAGGTGAGAAAAGAATTTGAAGATCAAATGAAA
AAATACCACATCATAACATTGCAGAGGAAGGAGAGGTGAGAAAAGAATTT
GAAGATCAAATGAAAAAAATCGAAGAAGAACGAGCGGTGATAGATGCAGC
GGATTTGGAATACATCAGGAAGTTGACGGAAGAAGATAACAAGGAGCGAC
AGAGACAAGAAGAGTTGGATATGAAGGCTGCCCACGAGTTGCAGAAACAA
GAAATGGCCAACCTTGATCGAAGAAGAACGAGCGGTGATAGATGCAGCGG
ATTTGGAATACATCAGGAAGTTGACGGAAGAAGATAACAAGGAGCGACAG
AGACAAGAAGAGTTGGATATGAAGGCTGCCCACGAGTTGCAGAAACAAGA
AATGGCCAACCTTGGTGTAACATTGAAATCACCCAGTGAACATCAACGCT
CATTGCTAGCATTATTGAAACCTAAATCACCAATGAAATTGCGACGCCGA
AGTATCCCTAACAAACAAGGGAGTAGTTCTTCATCCAAATCGAAAGCGAC
TCGTAACATATTGACGTCACCAAACCACACGATTACATCATTTTTCCAGA
AATTGGAGCACAAAAACGAACCGAATAATACTCAACAAAATATTAATGAT
ATAAAAAATAGCAGTAAAACGAATAGTAGAAATTGTAATGGAACGAATTC
AGGAAATCCCAATGATAGTTTGAATGGTAGTCTTCGAATTGAAAGAAATT
TAGTATCAACTTCCAGCGACAAACAAGGAGTAAACTCGACTTCCATGGAC
AACATTTCTTCGTATTCTAGTAGTACTGTAACTCGACCCACTCCGATTCA
AATCGACTTAGACGAATCGATAACTGAAGACTCTGATCGGGAACTAGCCG
AACGATTACAACGCGAATACGACCAGCAATGGCAAAATAATAACATTGTA
ATTACGCCTCAAAAAACACCTTTACGAGCCACAGATAACCTTATTAGAAT
TGATACCGAATCGAAGTCATCGAAAATTGACCGACTGAAATCGATTCGTA
AGCGAAACGATGATTTATCGATATCTTTGCATGATGTGGTCCCATCGAAA
GCGAGGAAAACGCGTTAGGTGTAACATTGAAATCACCCAGTGAACATCAA
CGCTCATTGCTAGCATTATTGAAACCTAAATCACCAATGAAATTGCGACG
CCGAAGTATCCCTAACAAACAAGGGAGTAGTTCTTCATCCAAATCGAAAG
CGACTCGTAACATATTGACGTCACCAAACCACACGATTACATCATTTTTC
CAGAAATTGGAGCACAAAAACGAACCGAATAATACTCAACAAAATATTAA
TGATATAAAAAATAGCAGTAAAACGAATAGTAGAAATTGTAATGGAACGA
ATTCAGGAAATCCCAATGATAGTTTGAATGGTAGTCTTCGAATTGAAAGA
AATTTAGTATCAACTTCCAGCGACAAACAAGGAGTAAACTCGACTTCCAT
GGACAACATTTCTTCGTATTCTAGTAGTACTGTAACTCGACCCACTCCGA
TTCAAATCGACTTAGACGAATCGATAACTGAAGACTCTGATCGGGAACTA
GCCGAACGATTACAACGCGAATACGACCAGCAATGGCAAAATAATAACAT
TGTAATTACGCCTCAAAAAACACCTTTACGAGCCACAGATAACCTTATTA
GAATTGATACCGAATCGAAGTCATCGAAAATTGACCGACTGAAATCGATT
CGTAAGCGAAACGATGATTTATCGATATCTTTGCATGATGTGGTCCCATC
GAAAGCGAGGAAAACGCGTTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000060_pilon | genome | sc0000060_pilon:549708..552689 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 610-1311:703 |
| Aaloc | 460-606:1081 |
| Aaloc | 397-459:1822 |
| Aaloc | 1-393:2983 |
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