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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000236_pilon:80125..88225+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_036490 ID=XLOC_036490|Name=XLOC_036490|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=8101bp|location=Sequence derived from alignment at sc0000236_pilon:80125..88225+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCAAAACTCCAGCAAGTTTACAAGCGTAGAAAGACTTTCTTACGGgt
ttgaatttcttttaatGACATTTCCTTGAAAATAAGTTAGTATACAAACC
AATCTGTAGTCCATtctctttaaaatgttttcttatttttattttgcttt
catttgttcaaaaaaagttttgtttcgaTATACTTTCTAgtgatgaaaaa
taatttgagaacttttgaaaattttgaaaatgaagattttaggCAATGTC
ACTTAAACAGTCAAacatgtatttttcattttactttAGGTTGGTGAGCG
ATGGAATATTGAATTGGAACTTCAAATTTCTTATATTGGAGGAAGTATAT
CTTGGTTTTCTGATAGCATGTTACAGGTAAAGCCAGAACATTCAAACGct
ttttcaatttattcttcaatttctttttatttttgatcttagtattcctt
tttctttatcattaAACTATTAAACATAGTTGGAAAGATCATagcttttg
atgtttttttatttaatacaaCTAGGTGGTCCAAGAAACAATAAAGGAAC
CCTGTTATGAAAGAGTTATTAGAGAATCTGAAAAATGCACTGATTGTCTA
TATCGTAAGTTTTTTATGGCTTACACTTTGGGACGAAAAATCTCTTTCTA
GATATTTTTTCTTGTCATCAAACTTGGTATCTTTTTGAAACATTAGAATT
TGTGGATAATCCTGGGTAACCTTTTTAAATATGCACAGCGTCGTTGTGAA
TCACTATACATCTAAAAACTCTATAGGAAGAAGGATAGCTGCCGATGATA
CAATCctcatttcatttaaaaaaggcctgaaaattaaatctttttagTTC
TTTCTTGAAAACATTGTGGCAGCTCATATTTTTATTCTTGATTGATATAT
TTTAAGGAGAAAAGAAATAACAATGCATTGCAATTTTCAACCACAATTAA
GTAAATGGCTTAgaagaattatattttagatcttTCTAGCCACCGTGGCT
GGTCATTgtgacaaaaagttttaaagagcatctgaataagaattcttcaa
aataaaaagaaaactcaaagttaaaatgtatgaaaagaaggttgatttta
acccgtCCATCTCTGAACCTCCTGTATAGAAAATTGTATCTCTGCATCCC
AAAATTAGTTTAGTGGTAGAAAATCTGCTTAAAGTTGTGggaagatgatg
gttcaacgccacgAAAAGGAGGCTTTGTAaagatttgtttgattttcgaa
aactttttacaaaacgttgtaaacacacacgaaTCAGagcggtttgtgta
aaccgcaggttacaggtcgcaggttacaggttacaggtcacaggttacag
gtcaacaaagtgcagaccagaaaaaagataataagatgataacatataca
taacataacatcaatacataacgtatgaaattacaaaaaaatagtacatg
ttatttagatattataaaatgacaattgaatagaataacaacctagtgac
acttacttacaaaaataatgacaaaatcataaaatatgatgcctaacaag
acaaaagcacgaaaaatatttatcatgcaaaatgtgatgtggatggtgtg
aatggataaaaaatggcaccaaacagaagcttgcaaggtccctaagagag
tggttttagaaggatggaactaattaattattcagttattattttaatgt
cttaatgacaatttttgacaaaaatattaacagaatcataaaatctgatg
caagataagacaaaaacacgaaaaatatttataatacagaatgtgatgtt
gatagtgtgaatggatataaaacagcaccaatcagaagcttgtgagttct
ctgagaaggtagttttagagcgatgtgttttatgtattatgtaaccatca
tataacattacaaatattacaatatgtaatatacctgttatacgtataat
atagtttcaaatattttctggtctgcgttatacacggcgcaaactgcgaa
agatcgataaaagcacatggttaaattttgatgtttgaaatggttttata
tgaatgaaattgcttgaaaattatgtaacctgcggtttacacaaaccaCG
AATTAGAGTATTAACATATCgaattctttaaagattttttttaattttag
gtgATGATCTTTTGATTATctataaatttcaaaagattcctGGAAAAAGT
AGCTACACAACCCTCCTCCGTGTTCCTGACAAAgtatgacttttcagttt
ttgaaaattgttgatttaaaaaagtAGATCTCTTGtccaaattttaaatt
atttttggtggctcttacaatttttgaaagacatatgctttgtttttgtt
ttgaatcaaAAATTACATTAATACTATTTTCTcaagttttattcattttt
gttaTTCTTCAGTACGCGAATACAGATGTTCCAAGGACTAGATgtgagaa
attttatttttttttttactttttttggaaTTCACTATGACTGCTAGTTG
AGACTCATTTTGATACTTTGAGGAATGTTAAATGTATGACCTATGCTACC
AAAATACATTGTAGTTTTATACAACAGgttattttcaacattaataCTCa
agaaacaattttcttttcaagatGGTAGATATAAACAACTTCCATTGTTC
AAAGACGAGCGATTAGTTGTGAGCGTGTCATTGAAGAAACAATCACAAAA
TAGAAAGGTAATGATTTCTgatattctaaaaaaattcaaaaaacctCAAA
GTTTCCCTCTAGAATGGTCAGCTTTCTTAAAAAATCCTCAAAGGTTCTTT
TTAAAATACATGAATTTTCCAATTAGAATATGTCttgtttaaaaagtaga
taaaaagtttcttttaaagGAATTCCTCCTTGAAGCACTCTTGGCTGTTG
AAGAGAATTACTTTTGTTGAAAATATCCTCTAAAATCAGGTACTTTTAAA
CGTCTTGTCACAACTGAACTTTTCAACCACCTTCCAAACCTTGATTAGCC
TGATTATACTGGTATCCCCAGAATACAATGTACAAAGcccttgttttaag
aaaaaggAATTCAGGCTGATGAAACTttgattcaaaacaaaaacaaagca
taCGTCTTTCAAAAATTACAAGTTCCTAGCCATTCTTATGTACTTATCAT
CTTTTTAGAATCATAGGctctattcaaaatttttgacatgCAAAATGCaa
gattctttcaaaatattttattttcagtggaAGACTACTTTGTAATTCTA
AAGGAAAATGATTACTTTTTAACTAGCTATggttttttcaaggaaaatgg
cTTCATACCTttggaaaaattgattttatgttATTTTAACTTTTGTATCT
TTCAAGGAAAATTGCTTTGCATCTTTTAAGGAAAATTGCTTTTTAGTTTC
TAAGGAAAATTGCTTTGTATCTTTCAAGGAAAATTGCTTCgtattttcca
acaaaaactaCTTGGTATTATGCAAGTGCAAGGAAAACTACTTTGTATTT
TGGTAGGAAATTGCTTCGTATTTTGCAAGGAAACTTTTGTATCTTTCAAG
GAAAATTGCTTTGTAGTTTCCAAGGAAAATTGCTTTGTATCTTTCAAGGA
AAATTGCTTTGTATCTTTCAAGGAAAATTGCTTTgtattttccaacaaaa
actaCTTGGTATTATACAAGTGCAAGGAAAattactttgtattttaatag
gAAAATTGCTTCGTATTTTGCAAGGAAACTTTTGTATCTTTCAAGGAAAA
TTGCTTTGTATCTTTCAAGGAAAATTGCTTcgtattttgaaaggaaaatt
gCTTTGTATCTTTCCAAGGACAATTGCTTCatattttccaacaaaaacta
CTTGGTATTATGCAAGTGCAAGGAAAATTACTTTGTATTTTGCTAGGAAA
ATTGCTTCGTATTTTGCAAGGAAACTTTTGTATCTTTCAAGGAAAATTGC
TTTGTATCTTTCAAGGAAAATTGCTTTGTATCTTTCAAGGAAAATTGCTT
CGtattttccaacaaaaattaCGTTGTATTTTGCGAGGAAGATTGCTTcg
cattttgaaaagaaaattgcatCATAATTTGTATGGAAATTTGCTTCATA
AAGGAAATTACTTTGTATCTTTCAAGGaaaattgttttgtatttttcaag
aaaaattgcCTTGCATCCTTCAGGGAAAATCGCTTTTTATCAGctatcca
aaaaatatctgcaatctgattggttaaaaagagtacaagatatcttgtat
tttacatgtaaaaatataaattgacgaaaagatgttgttgcattgtagcg
atagaagcaatctaacgtcactttgctacaaaaatgtcctccaacacaaa
aagtgcattttttgggtcatccatcgataaaccagttatcagatatttgc
tcgtacaatatggaaatatttcactcgttccagattttccgtatattttc
ctcgccaaAAGGCTAGGAAAATATTgcacggaaaaatctcggaactcgta
aaatatttctcacatTGTACTcacaactgtccgataactattacgtatct
ttcaaggaaaattacttTGTATCTTTCAACTAAAATagctttgtattttt
caaggaaaattgttttgtatcgtacaaaaaaagttgtttcgttttttttt
caaggaaaattggtTGTACTTTGCAAGTAAAATTGCTTTGtaatttccaa
gaaaaattgctttgtatctttcaatgaaaattgCTTCGTATTTTCCAGTA
AAAATTGCTGCGTATTTTGCTAGGAAAATTGGTTTGTATCTTTCAAGGAA
AGTTGCTTTGTATTTTGCAAGGAAAACTACTTCATGTGTTATAAGGAATA
TAGTTATGGCATTCAACAACAgtatatttctatttttcaaggaaaatgtt
ttGTGTtactttcaaagaaaaaagctttgcgaaagtgatgccattatgct
ttttcaaaaatcaaaacaaacatggaAGGTTGTTGCTATTCTCTTTTACT
TTGTTGTCTTTGGTGTTCATGCTATTAATGAGTTGAATTTGATCAAGATT
TTTGTATGATTGTCACAAGAAATGGCTTATGTTGTAGTGTACTTATTATT
CTTTcctgaatcgaatgttttgtttccattttgacggttggaatgagaga
tgccaatttcttgcaaaaaaaggacaattttgtaattttcactgACTTAG
GTTAGTTTTCACTCAACCTTAGatcaaaatcttcttcttctctAATATTG
ACTTAACTGAATTAGAAAAAGGTGAACCAGGAGAACCAAGAAGAACGGAG
GTGAACTCATCTGGTAAACCGGCTGAATCGAGGGGAACCCAGAACCCAGA
CCCAGATTCTGCACAACTTCTTAcagtactttgaaattttctttgtgcat
tttgaaCGTGGAAAACCTTTGTTGTCAACACACTTTTGACAAGCctttaa
aacatggaaaattttttgttgtcaattataaaaattttcctccACATTTA
TCTGTTTaaatgtgaaaaacttttgttgctTATATGAGAGTTAATTCATT
TAATCTTTACAGCTCACCCTAATAGAGACTTATACGCATACATAGTTTTG
ccttcttttaaaccacatgtaccgtgagattgggtaacttgcatcagtgg
aggctaacatgcatagccctcaaatgaatgatctGCTGAactggtcttta
aaatacaactacgcagctccgctcgtaCATCTTTACTCTACAATAATTAC
TTCGTATTTTTGAAGGATAACCataacatttatttttttaaaggtttatt
ATCTTGTCCTGTTTAGTAATAGTTATCCCAACTGAGTACAATACAGGATA
TATTTTTCGATTACAgattttttgtcatattttgtatattatgaatgaaa
agaaaatgtttcagAGCATAAAAGTgtacaaaatatgatctctcgcATAC
CAGACCCCTTATGCTGATCGCAGTCTTGTATTTGTAAGGttcaatatgaa
atacagcatatATGTACGCATTTTTAGCCAAtaagattgctcatattttt
catgttgacgataaAAAGAGATATTGCATCCTATTTTCATTGATAAATTA
CTTCGTTTTTTAAGGAAAACTGCTTTATATTTTGAAGGGAAAACATTTAA
cgtaattttcaacaaaatacatttttcattactttaaatggctttgtctt
tttttaggaaaaattaatctgtatttttgaagaaaattataacatgtttt
ttttaaaagagtttGTTATTTTAACGAGAATGATTTTAAGTGTTATAGTA
AATGGCTTTGCACTTTGGTAGATAATAAGCTTTGTTTAAGAATATTGATT
ATGTGAAATTTTCAAGAACAATTGCCTCATACttctgaaattctttttgt
caattttaaagaaaatggcttcaattttgaaggaaaatgataTTGTGTTA
CTCTTAAGAAAAATAGCTTcgtggtttaaaaaaaaaattgctttgtttct
tcaaaggaaaattttattatgTAATTCATGCTGAAAGCTTAGTATTTTTG
AATGGAAATGATATAacgtatttatttatttaaaatttcactttttttag
tgaaaatttaaaggaagttGACTTCGCATTTTTATGGAAATCTTGCTTAT
GTAACTATCCAAAGGAAAATAACTTTgcaattataaaaataatgataatg
tgtcttctgaaagaaaaacatatttcacgaaaaatgaaagaaaacggCTT
CATGATTTTAAATGGAAAGGGAAATTTAAGGTCATGTCCATAAGAAAATG
GAAATGGatttcaacaaaaagaaaaacttttaggTAATGAAAATTGGTGG
CTCTCTATTTAGGATCATTAAATCGTTCGCAATTCAACTACTTCATcccc
cccccAGATTCTACTATCCCTAAAAAACTTTAAGCACTCAGCCATTTTTA
CAACTTCTGTCACATTCAAACAAAACGACCTTTTGTTATATCATTAGTGT
TTGGCTTTTTATGTTCAAGTTATCTATCAAATGTCAGCTGAAAGGTTTTT
GTATTCTCTGAAAGAGTAAtaaaaaccatttaaattttgagGATCCTTTA
GTTCCATATTTATTCGGTTTGAATGTGTTTTCCTAAGTGGGCAAGTAGAT
ACAATGGTGAAGGTCTTTTCTTTAATAAATGCAAACAAAGAgctatttaa
aaaacaattctTAGCCTGAAGCAGCGTCTGATAATTTAGATTCCTTTAAA
AGGtgtaagcaaatttctttaatgtTTCTTTCTTACATAGGATGAAATGG
ACGTATCGAAGGAAGTCATCAGTAAATATTTCGCTCCGCTTCCTTGCAAT
GATCAAAACTCAAATGTTGAAAAGTAAGTTCTCTGATTCTAAACATTTCA
TAAATCATCTATTGCTAGAAATATTTTGCTGTTATGATGTGCCAATCGAG
GCAAGCTTGTTTGTGGATTTATGaagtataaaaaaaaacaaaaaaaattt
caatcgatCCGATTCCTGTTCATCTTTTTCTATTTATGAGattcatattt
ttcattttaggaaACCAATCactgtaaagaaaaaaactgGCAGAGGTAAA
AGTACTAAAGATGATgggaattcaaaaaaagatGTTACTCTACAAACTCG
CGCAGTGAAAGTCGTTCAAGACATAGACGATGGCGCAGTGAAAGTCGTTC
AAGACGATGGCGTCGATATTTCTAAGAATGACGCCGAATTCTTCGatgaa
aaattacaagaaaaggggaagaaagcaaagaagaagccaacaacgaaaag
aaaaccggtagcagaaaagaGCATTTTGGAACTAGCGACAGACAATAGTG
AATCGAAACAAGCTCATTCTGACGATGACCAATTTGAAgagaaaagtcag
aaaaacaTCAAAAGGAAACGAGGGAAACGTTTGACCATGTCGAAGACGAA
ATCCAAGAAACCCAAAGCGTCGAATGTGGAGAAACAAGCAGAGGTCGACG
ATGACTTGCCCGCCAGTGGAGTGATTGCCACTTGCTCAAAAGATACACAG
AACGATAGATTGCCACCCTCCTCAGTCACTTCTTTGGAAGATCTGATCGA
A Coding sequence (CDS) from alignment at sc0000236_pilon:80125..88225+ >XLOC_036490 ID=XLOC_036490|Name=XLOC_036490|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1518bp|location=Sequence derived from alignment at sc0000236_pilon:80125..88225+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCAAAACTCCAGCAAGTTTACAAGCGTAGAAAGACTTTCTTACGGAT
GTCAAAACTCCAGCAAGTTTACAAGCGTAGAAAGACTTTCTTACGGGTTG
GTGAGCGATGGAATATTGAATTGGAACTTCAAATTTCTTATATTGGAGGA
AGTATATCTTGGTTTTCTGATAGCATGTTACAGGTTGGTGAGCGATGGAA
TATTGAATTGGAACTTCAAATTTCTTATATTGGAGGAAGTATATCTTGGT
TTTCTGATAGCATGTTACAGGATGAAATGGACGTATCGAAGGAAGTCATC
AGTAAATATTTCGCTCCGCTTCCTTGCAATGATCAAAACTCAAATGTTGA
AAAGATGAAATGGACGTATCGAAGGAAGTCATCAGTAAATATTTCGCTCC
GCTTCCTTGCAATGATCAAAACTCAAATGTTGAAAAgaaACCAATCactg
taaagaaaaaaactgGCAGAGGTAAAAGTACTAAAGATGATgggaattca
aaaaaagatGTTACTCTACAAACTCGCGCAGTGAAAGTCGTTCAAGACAT
AGACGATGGCGCAGTGAAAGTCGTTCAAGACGATGGCGTCGATATTTCTA
AGAATGACGCCGAATTCTTCGatgaaaaattacaagaaaaggggaagaaa
gcaaagaagaagccaacaacgaaaagaaaaccggtagcagaaaagaGCAT
TTTGGAACTAGCGACAGACAATAGTGAATCGAAACAAGCTCATTCTGACG
ATGACCAATTTGAAgagaaaagtcagaaaaacaTCAAAAGGAAACGAGGG
AAACGTTTGACCATGTCGAAGACGAAATCCAAGAAACCCAAAGCGTCGAA
TGTGGAGAAACAAGCAGAGGTCGACGATGACTTGCCCGCCAGTGGAGTGA
TTGCCACTTGCTCAAAAGATACACAGAACGATAGATTGCCACCCTCCTCA
GTCACTTCTTTGGAAGATCTGATCGAAgaaACCAATCactgtaaagaaaa
aaactgGCAGAGGTAAAAGTACTAAAGATGATgggaattcaaaaaaagat
GTTACTCTACAAACTCGCGCAGTGAAAGTCGTTCAAGACATAGACGATGG
CGCAGTGAAAGTCGTTCAAGACGATGGCGTCGATATTTCTAAGAATGACG
CCGAATTCTTCGatgaaaaattacaagaaaaggggaagaaagcaaagaag
aagccaacaacgaaaagaaaaccggtagcagaaaagaGCATTTTGGAACT
AGCGACAGACAATAGTGAATCGAAACAAGCTCATTCTGACGATGACCAAT
TTGAAgagaaaagtcagaaaaacaTCAAAAGGAAACGAGGGAAACGTTTG
ACCATGTCGAAGACGAAATCCAAGAAACCCAAAGCGTCGAATGTGGAGAA
ACAAGCAGAGGTCGACGATGACTTGCCCGCCAGTGGAGTGATTGCCACTT
GCTCAAAAGATACACAGAACGATAGATTGCCACCCTCCTCAGTCACTTCT
TTGGAAGATCTGATCGAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000236_pilon | genome | sc0000236_pilon:80125..88225 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 220-759:7562 |
| Aaloc | 136-216:7291 |
| Aaloc | 49-135:290 |
| Aaloc | 1-48:1 |
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