XLOC_036487 (mRNA) -

Overview
NameXLOC_036487
Unique NameXLOC_036487
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000004_pilon:24572..25558+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_036487 ID=XLOC_036487|Name=XLOC_036487|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=987bp|location=Sequence derived from alignment at sc0000004_pilon:24572..25558+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGATGGCACTTATACCAGAGTTTGAAAGTGTTTTATTAAATGTGACTGG AGCAAAGTCAGCCAATAAAATTGAATCAATTCAATCTTTATGGAGTGGTT ATGGAGAAATAGCTCGTATGAAACTAGAAGGAGCTTCGCAATCTTccata ataataaaaaatatagcACTTCCAACACGAACAAACCATCCACAAGGATG GAATACAAATCGTGGGCACCAACGTAAATTAAAATCTTATGAAGTAGAAA TGGCCTGGTATAAAAATTATGCAGATAAGTGCAATGAATCTTGTCGCGTA CCAAAATGTTATGCCACAAAATCTAAAGATAGTCAACATATGATTGTCTT GGAAGATTTAGATGCTGCAGGATTTCCCTTACGCCATTCTTcattatcaa ccaatcagatatATGCTTGTCTTTCTTGGCTAGCAAATTTCCATGCAGTT TTTCTTGGTACTAAACCAAACAATCTATGGGAAATAGGGACTTATTGGCA TTTAGGGACTCGTCCTGATGAACTTGAAAAAATGGATCATCCAAAACTAA AGAAAGCTGCACCTATGATTGACCAAATATTGAATGAATGTCAGTTCAAA ACTCTAGTTCATGGCGATGCAAAAGTagctaatttttgtttttcaacaaG TGACACAGTTGTAGCTGCAGTTGATTTTCAATATGTAGGTGGAGGTTGTG GTATGAAGGATGTTGCTTATTTTATTGGAAGTATTCTAGATGAAAAAGAG TGTGAGTCCAGGGAAAGTGAACTCCTCCATGTTTACTTTGCAGTTCTAAA ATCAGCAACTCTGAAGCATCATCCTAATTTAGATGTTGAAAACCTAGAAA ATGAATGGAGGAAACTTTTTCCAATAGCATGGACAGATTTTCATCGGTTT CTTTTAGGATGGAGCCCTGGGCATTGGAAAATTAATACTTATAGTGAAAA ATTAGCAAGGAAGGTCATTACCAAGCTAGGGATATGA

Coding sequence (CDS) from alignment at sc0000004_pilon:24572..25558+

>XLOC_036487 ID=XLOC_036487|Name=XLOC_036487|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1974bp|location=Sequence derived from alignment at sc0000004_pilon:24572..25558+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGATGGCACTTATACCAGAGTTTGAAAGTGTTTTATTAAATGTGACTGG
AGCAAAGTCAGCCAATAAAATTGAATCAATTCAATCTTTATGGAGTGGTT
ATGGAGAAATAGCTCGTATGAAACTAGAAGGAGCTTCGCAATCTTccata
ataataaaaaatatagcACTTCCAACACGAACAAACCATCCACAAGGATG
GAATACAAATCGTGGGCACCAACGTAAATTAAAATCTTATGAAGTAGAAA
TGGCCTGGTATAAAAATTATGCAGATAAGTGCAATGAATCTTGTCGCGTA
CCAAAATGTTATGCCACAAAATCTAAAGATAGTCAACATATGATTGTCTT
GGAAGATTTAGATGCTGCAGGATTTCCCTTACGCCATTCTTcattatcaa
ccaatcagatatATGCTTGTCTTTCTTGGCTAGCAAATTTCCATGCAGTT
TTTCTTGGTACTAAACCAAACAATCTATGGGAAATAGGGACTTATTGGCA
TTTAGGGACTCGTCCTGATGAACTTGAAAAAATGGATCATCCAAAACTAA
AGAAAGCTGCACCTATGATTGACCAAATATTGAATGAATGTCAGTTCAAA
ACTCTAGTTCATGGCGATGCAAAAGTagctaatttttgtttttcaacaaG
TGACACAGTTGTAGCTGCAGTTGATTTTCAATATGTAGGTGGAGGTTGTG
GTATGAAGGATGTTGCTTATTTTATTGGAAGTATTCTAGATGAAAAAGAG
TGTGAGTCCAGGGAAAGTGAACTCCTCCATGTTTACTTTGCAGTTCTAAA
ATCAGCAACTCTGAAGCATCATCCTAATTTAGATGTTGAAAACCTAGAAA
ATGAATGGAGGAAACTTTTTCCAATAGCATGGACAGATTTTCATCGGTTT
CTTTTAGGATGGAGCCCTGGGCATTGGAAAATTAATACTTATAGTGAAAA
ATTAGCAAGGAAGGTCATTACCAAGCTAGGGATATGAATGATGGCACTTA
TACCAGAGTTTGAAAGTGTTTTATTAAATGTGACTGGAGCAAAGTCAGCC
AATAAAATTGAATCAATTCAATCTTTATGGAGTGGTTATGGAGAAATAGC
TCGTATGAAACTAGAAGGAGCTTCGCAATCTTccataataataaaaaata
tagcACTTCCAACACGAACAAACCATCCACAAGGATGGAATACAAATCGT
GGGCACCAACGTAAATTAAAATCTTATGAAGTAGAAATGGCCTGGTATAA
AAATTATGCAGATAAGTGCAATGAATCTTGTCGCGTACCAAAATGTTATG
CCACAAAATCTAAAGATAGTCAACATATGATTGTCTTGGAAGATTTAGAT
GCTGCAGGATTTCCCTTACGCCATTCTTcattatcaaccaatcagatatA
TGCTTGTCTTTCTTGGCTAGCAAATTTCCATGCAGTTTTTCTTGGTACTA
AACCAAACAATCTATGGGAAATAGGGACTTATTGGCATTTAGGGACTCGT
CCTGATGAACTTGAAAAAATGGATCATCCAAAACTAAAGAAAGCTGCACC
TATGATTGACCAAATATTGAATGAATGTCAGTTCAAAACTCTAGTTCATG
GCGATGCAAAAGTagctaatttttgtttttcaacaaGTGACACAGTTGTA
GCTGCAGTTGATTTTCAATATGTAGGTGGAGGTTGTGGTATGAAGGATGT
TGCTTATTTTATTGGAAGTATTCTAGATGAAAAAGAGTGTGAGTCCAGGG
AAAGTGAACTCCTCCATGTTTACTTTGCAGTTCTAAAATCAGCAACTCTG
AAGCATCATCCTAATTTAGATGTTGAAAACCTAGAAAATGAATGGAGGAA
ACTTTTTCCAATAGCATGGACAGATTTTCATCGGTTTCTTTTAGGATGGA
GCCCTGGGCATTGGAAAATTAATACTTATAGTGAAAAATTAGCAAGGAAG
GTCATTACCAAGCTAGGGATATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_036487XLOC_036487-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000004_pilongenomesc0000004_pilon:24572..25558 +
Properties
Property NameValue
Aaloc1-987:1