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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000004_pilon:45152..48492- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_036484 ID=XLOC_036484|Name=XLOC_036484|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3341bp|location=Sequence derived from alignment at sc0000004_pilon:45152..48492- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTTTCATCAAACGTGGTTTATGACTTCTCTGGAAAAGTCGTCTTAGT
AACAGGTTCGTGTAACTAGAAGCTATTTTTACTTCTTTGAAACTTTCTTA
AAATGATTCTTTAGATTGTCTAGCCTGGATATCCAGGCTGTAAACTATTT
CACAGCCTAGTTTTTGATATTTTATGTTCTGGTTTACAGCCTGGTCTCCC
TAGAGCGATTTGCATTCTTTTTAAGAGAATGCAGTCCGCTTGCTTGCGCT
CACTTCGCTAAAACCATAAGGGCCAATCTACACGGCGTTGAGCAATTCTA
AAGCAAAAATAGGATAGTCCTCCATATCAATTTCTGTTTTGCTGCCCTGG
GTTGGCTAGGAAACATGGGTTTCCACTTTCATTCTCTAGGGAGACCAAGC
ACTATAATTTTAGAACTTTGTATGTTGAGGTAAATTTTGTTTTTTCTAAA
ATTTTGAGCTTGGATATCCAGGCTATAGATTGTCCAATTGAAATACACAG
TCAATTCTTTCTAATTCTAACCATCGTCAATGGTGTTTTCAGTAGGTAGT
GTCCCGGGGTACTTAGGCAAATGGAAGGTATGTACCTTTTTTGGATTTCC
AAAGTCCCGCTAAGGGTTGGAGAAATAACAAAATTTCAACTTTTCACCCC
CAGAAATATCGAAATTTGGTCAGCATTGGTCAAATTTGTCCCGGTAAGGG
TCGTAAAATTCACAAAATGTTCCTTTATTTTCTCATTTTTAGTCCCGGTA
AGGGTCCGAGGTTCAAAAGTCGGGCGGCACCTCCCTGTCAGCTCGCAAGC
CTAGTACCTCCCCGAGCTCTGTGTTTTCGAAACATACTCATTTTTGTTGA
GGTTAGCCTTTTTCATTATTTTAGGCACCTGAGCTTCGAATTGTTCTTAC
CCACTGAATACTTTAGGGCAACATTTTTGCAAATTGAGGCTTTATAACCC
GTAAACAATTTGAACCTTGAATTGCTTGAAATACAGCCATTTTGAGCCTC
AATATTGTTCTTTAAAGTGTTCTTATTTTTCGACGATATCGAGCCTGTTG
TTTTTCATTATGAATAGCACACGCTTGCAAAAGCTGTTTTTTTTATGAAA
TATTGGGTTATAAAAGTCTGTTTGACATTTAATTTATTCTTTCAAAATTA
GGCGCTGCCTCAGGAATTGGTCAAGGCACTGCTTACATGTTTGCAAAATC
TGGTGCTCGACTCGTTGTCACAGACCGCGATGAAACCAATTTGCAAGAGA
CTGCCAAGAAATGTGAAGAGATGAGCAAACAAAAAACATTGGCAATCGTC
GGTGATTTAACAGTTCAAAGTGACCTTGAGAATTTGATCAACAAAACAAT
GGAGACTTTCAAACAACTTGATGTTTTGGTCAATAATGCAGGAGATTTGA
TCATGGGAACTTGTCTACAAACATCGACTGAAGATTTTGATAAAATGATG
AACATTAATATCCGATCCGTTTTTCAACTAACAAAGATGGCGATACCACA
CTTGAAGAAAACTAAAGGTAAATTGTATATTTTTTCACTTTTATGCGATA
TTTTCTATCAACTTGTCAACAATCTGATTGTTAAAATGAATTTGAACTTG
CGACTGCATAAGGAATTTCAATTCTGAAATGCCCCTTCAAATAAAAATCA
ACTTTAACAAAAATATATTCTATGAAAAAATTACAATTATAGGAAATTAT
AATTTTCTTATTACAGGAAATGTTATCAACGTGTCAACCCTGGGCAGTTC
ACGTCCTGTAAGTAAATTTGTCATCTGAAATCTTTGGCATAATTTTATAT
TTCTTCAATTTTAAAATTTTCGAACAAAATCATTTGAATATGAAAATTCC
TGATAATTTGGATTTAAAAATATTTTGAAAATTGTTAAGCTATATTATAG
CAACAAAAACAGTCCCAAAAATGTCCTTTCTTTTTTCAGCAAATCGGCTT
TAGCGCTTATTGCATAAGCAAAGCAGGATTAGATCAGTTCACAAGAGCTG
CAGCCATCGAATTAGGAGCTGATCAAGTTCGTGTCAATTGTGTCAATCCA
AGCATCATTGCCACTGATAAATGCTCGAGCAGCTCAGATCCTAGTGTCAA
AGTAAGTAAAACGTCAACCTCGTTCCCAGGGCCTGATTTTCAGTTTTTTA
TAATTTTGATGGTCGTTTCGATTTCGTTTCGATCCTATATAAAAAGCAAA
TCGTATTGGGGACGAGGTTGAGTAAAACGTTTGAACTAAAGTACATCCCT
GTCTCACAGCCCCGGTGGAACTATTTTTCTCAGTGGGGACGAAAATTCCT
ATTGAAATCCCAATGGGATATAAATTCCTTTCTTCAAAGGTTAAAAAAAA
CTCAGTGTCAATGGTTTTGAAGTTCAATTTTTAAGCATTCAATTTAGAAT
GGGGATGAAATTTTAAGGTATTTTCTCACCGGGGCCGAAATTTTTGTCAA
TGCTTCCAGTGGGGCTGGGCTCCTAGCGGTTCTGTGACACAGGAGTATTT
AAGTTGTACAGTTGCTGCTCATTAATTCAGTTTTCAAGGGGAATTGGATT
TTCATCGAATAAGAGAGCGTAACGAAATGGTAGAACGTTGTTTATGAACG
TTTCTTATTAATGGTGGCTTTCAATTATGTCGAATGAGAAAGCATCAACT
GTATGTGGACGGCAAAACAACCTTTTTTATTAGATCGTGTACTATAGTCA
GATGTCTGGGAAGGATAAGGTTATTCTTTCACACACGAGTCTAGCAAGGG
CTTGTGTATCTTGATTTGTTACCAATTTACTCTTAGGTGCCAAATAAACA
AGGGTTCGATTTAACGGGGGGATGGGTTGGAAAATATTCGAAATTTTAAT
AAACGGGGGGGGGACCTAATTGCTGGGGGTTGGAGATTGTACTTCTGAAA
ACCCAAAAATAAGGTAAATATAGGCTAAAATCATATACTTAGGCTTTTGG
AGCAAAATAAGGCGACTTCTTTTTGCTAACTGAAAATATTCTTAAAAATT
AATAAACGGGGAGGGGTCCTAATAAGGTCCGGGGGTTGGAAATGTTCGAA
TAATTAACAAGCGGGGAACGTTTATTTGGAACCTAGGAGTAAAGCATTTT
AATACTCCCAAACAAGGTTCCAAACATATAAAACAGGTATTTGAAGAACG
AAAGTAAAAGTCTTGAATAATTATTTCAGGCTGCAATGGAGAGGAGCAAA
ATGACACACGCCCTTGGCCGTGCTGGTACAGTTGATGAAGTAGCCGAAGC
CATCTTGTTTCTAGCGTCAGGAGCTGCTTCATACATCACAGGAGCATCAA
TTCCTATTGACGGGGGTCGATCAGCTATGATTCCAGTCTAA Coding sequence (CDS) from alignment at sc0000004_pilon:45152..48492- >XLOC_036484 ID=XLOC_036484|Name=XLOC_036484|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1572bp|location=Sequence derived from alignment at sc0000004_pilon:45152..48492- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTTTCATCAAACGTGGTTTATGACTTCTCTGGAAAAGTCGTCTTAGT
AACAGATGGTTTCATCAAACGTGGTTTATGACTTCTCTGGAAAAGTCGTC
TTAGTAACAGGCGCTGCCTCAGGAATTGGTCAAGGCACTGCTTACATGTT
TGCAAAATCTGGTGCTCGACTCGTTGTCACAGACCGCGATGAAACCAATT
TGCAAGAGACTGCCAAGAAATGTGAAGAGATGAGCAAACAAAAAACATTG
GCAATCGTCGGTGATTTAACAGTTCAAAGTGACCTTGAGAATTTGATCAA
CAAAACAATGGAGACTTTCAAACAACTTGATGTTTTGGTCAATAATGCAG
GAGATTTGATCATGGGAACTTGTCTACAAACATCGACTGAAGATTTTGAT
AAAATGATGAACATTAATATCCGATCCGTTTTTCAACTAACAAAGATGGC
GATACCACACTTGAAGAAAACTAAAGGCGCTGCCTCAGGAATTGGTCAAG
GCACTGCTTACATGTTTGCAAAATCTGGTGCTCGACTCGTTGTCACAGAC
CGCGATGAAACCAATTTGCAAGAGACTGCCAAGAAATGTGAAGAGATGAG
CAAACAAAAAACATTGGCAATCGTCGGTGATTTAACAGTTCAAAGTGACC
TTGAGAATTTGATCAACAAAACAATGGAGACTTTCAAACAACTTGATGTT
TTGGTCAATAATGCAGGAGATTTGATCATGGGAACTTGTCTACAAACATC
GACTGAAGATTTTGATAAAATGATGAACATTAATATCCGATCCGTTTTTC
AACTAACAAAGATGGCGATACCACACTTGAAGAAAACTAAAGGAAATGTT
ATCAACGTGTCAACCCTGGGCAGTTCACGTCCTGAAATGTTATCAACGTG
TCAACCCTGGGCAGTTCACGTCCTCAAATCGGCTTTAGCGCTTATTGCAT
AAGCAAAGCAGGATTAGATCAGTTCACAAGAGCTGCAGCCATCGAATTAG
GAGCTGATCAAGTTCGTGTCAATTGTGTCAATCCAAGCATCATTGCCACT
GATAAATGCTCGAGCAGCTCAGATCCTAGTGTCAAACAAATCGGCTTTAG
CGCTTATTGCATAAGCAAAGCAGGATTAGATCAGTTCACAAGAGCTGCAG
CCATCGAATTAGGAGCTGATCAAGTTCGTGTCAATTGTGTCAATCCAAGC
ATCATTGCCACTGATAAATGCTCGAGCAGCTCAGATCCTAGTGTCAAAGC
TGCAATGGAGAGGAGCAAAATGACACACGCCCTTGGCCGTGCTGGTACAG
TTGATGAAGTAGCCGAAGCCATCTTGTTTCTAGCGTCAGGAGCTGCTTCA
TACATCACAGGAGCATCAATTCCTATTGACGGGGGTCGATCAGCTATGAT
TCCAGTCTAAGCTGCAATGGAGAGGAGCAAAATGACACACGCCCTTGGCC
GTGCTGGTACAGTTGATGAAGTAGCCGAAGCCATCTTGTTTCTAGCGTCA
GGAGCTGCTTCATACATCACAGGAGCATCAATTCCTATTGACGGGGGTCG
ATCAGCTATGATTCCAGTCTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000004_pilon | genome | sc0000004_pilon:45152..48492 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 625-786:163 |
| Aaloc | 463-624:1403 |
| Aaloc | 424-462:1624 |
| Aaloc | 58-420:2189 |
| Aaloc | 1-54:3342 |
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