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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000004_pilon:19046..24155+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_036482 ID=XLOC_036482|Name=XLOC_036482|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5110bp|location=Sequence derived from alignment at sc0000004_pilon:19046..24155+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCAAATAACGTTTTCTGGTTTGACTGTGCTGCAAACGATGAGGAAAA
tgtgaacaaaacaaaaacatctaGACCAAAGTTATCCTCTGATAGAAAGC
CTAAAAAATGTAATTCAGTTGAAGAGATTCAGAAAAAGATTGACGAAGCA
AGTAAACGAAGAGAggtaattaaaaatgtttaaaatgttGTATCATTCCA
TTTTACTATAAAATAATAAGCAGACAGGCCATTTCTCATGTCCTTTTAGT
GTCCGGTTATCGGACACTGCCCTTCCCGAATTTGCAaagattttggtaaa
aacagcctttttggtgaaaaacagCCTTATAATACCATACTTTTTCTAAC
TTCTatttatcataaaaaaattcactccattaagaattagtgaataaggc
tGAACCTGTGTGGAAACACGTGGGAGAGGCCAGTATTTttcagtgaaaat
aaaaattaaaaggaaaaagtacagaagaaaaagtcaaaaatcaaatgttt
ggCAAGCTACAACTGGTGGATATCAACAACGATCAATCCTGCCTTGGCTC
GTTTGTATGTTAAGTCTGAAGACCACCTCATCGAATAAACTCTGACGCTT
CAACATCAGGCTGCACTCATCCCACAGTGCAGCCATTCAGCTAAGTGACT
AATACTATTTACAACTATATTCTAACATCATGAATCTACTACGCATAGCA
TCACTTATTGTTTTCTGTTGGCACCTCCAATCTTCTGAGATTACAACAAT
AAACCAAGGCAACTCCTTATTGTGCTGTAAACTTCTGTCGAataatgaaa
tctgtttgatgTCAATTGCACTTATTTACCAGGAAAATCGATTACATCAT
TACTGCGTACACCCACATGGATTGCTACAACAACTGCTTCTATTCCTAAG
CGGTACAGTCGAAATCAACCCAGGACCgacttcaaaattaaaatttcctt
GTGGCCAATGTTCAAAAGCTGTAAAGGAATTCTCAGAAAGCAATTGCATG
CGATATTTGTAATCAATGGTACCACTGTGAATGTGTATCAATGGGGGACC
AGGTTTTTGACTGCTATGTTGACGATGAAACCCTTGAATGGACATGCTCT
CTATGTGTACTTAAAGACGTTACACCCAGTGTTTTTGACACCTCGATATC
TTCAATATCATCAGACGAAACATTCAACTCGGAAAACAATCGTTCATTTG
ATGTACCTCCGAAAAAATCCAAATCAAAAAGACTCCGCATTTGCATTTGT
AACTTTCAAAGCATCTATAATAAAGGTAAACTTTTGCAGAATACTTTATT
GGAAAATGACATTGATATCATGCTAGGATCCGAATCGCACTTATCATGTA
ACATCTTCAATTCAGAATTTCTACCAGAGCACTACACAGCCTCAAGGCAA
GATAGAGCAGACGGAAAGGAGGTGTTATTATTATCTACAAGTCAGCTTGT
TGGTTgaagaaattaaacaaaaatcaGGTGAAATCATTTCCATTAaagta
aaaacatttgaaaagccGATATTACTGACAGCATGTTATAGATCAACGCA
AAGCACAAAAGAACAAGATCAACAACTTATAAACAGTTTGGAGCAAATAA
TCTCTAAACACAAAAACATACCAGTATGGATTGGTGGAGACTTTAATTTG
CCAGACATCAACTGGGATTCAAAAGAAATCGCTACAAATCACTACTCAAA
AGagacaaatgaaaattttttaaatctctttgataCGTTAAACCTTACCC
AACACGTAAACTTTACCACACGTAAAAAATCAGTACTTGATCTCTTCCTA
ACCAACCGTCCAGGTTTGATAGAACGTTGTGAACCGCTACCCGGCTTTGG
AGATCACGATACAGCAGTTATATCAGATATTTTATGTCACCCTACCAAAA
TTAAACCTATTCAAcgcaaaatatatatttggaaGAGGGCAAACTTAACA
GCTTTAAAAGACCAAGTACAGAATAAGATAAACAGACTTATTGAAATTGA
ATCAACCGCAACATCAATAAACACTTTATGGTTTCAATTCAAAGACATTC
TTCAGACAGCTCAAGATGCACATGTTCCAACAAAAATGACATCTTCAAGA
TACACCCAACCTTGGTTCAATAGAGATTGTAAACGTGCTACCCGAAAGaa
aaaaaGACGTTACCGAGTATACAAACGTACAAAACTTGATAAGGACTATG
ACAAATACATTCTTGCAGAAAAGGAAGCTAGAAAGACATGCGACAACGCC
TATAACAATTACATCCGAGACAAAGTACTCAGCGATAAAAAGAACACTAA
AAGATTCTTCTCctttataaaagcaaaaaagacaAACATTGTTGGAGTCA
GTCCGCTGTTAGACAATAACGGGCAAATTCAAACAGAAGATCTTAGCATT
GCAGAGACACTGAATAAACAGTTTTCTAGTGTTTTCTCTGCCGATGATGG
AATATCACCCGAAATTAACGACCCACAAGGCCCTCCAATTGGAAAAATTA
CCTTTACCAAAAATGGCATCACCAAACTCTTAAAAGACCTTGATCCAAAT
AAAGCGAGCGGACCAGATGGAATATCAACAAGGATCTTAAAGAATGTGCT
GACGAGATTTCAGACTTTCTCGTCTTATTGTTTACAGCATCATTACACCA
AGGAAAAGTACCAAATGATTGGAAACAAGCTAATATCACCCCGCTATACA
AAGGTGGAAACAAAAATCGTTCAAAGCCTGAGAACTATCGACCCGTTAGT
TTGACTTCTACAACTTGTAAAATCATGGAACACATCATACATAGTCACGT
AATGTCTCATTTTGACCGAACAAAGATACTCTCCAATAGCCAGCACGGAT
TCAGAAAACATAGATCTTGTGAAACCCAACTGATCCAAACAGTTCATGAC
ATTGCTAAAGCAATTAATGACAAAGAACAAATTGATTCCATCTTGCTTGA
TTTTAGCAAGGCCTTTGACAAGGTTGGGCACAGGAAACTCatactgaaat
tgaaacattacgGTATAAACGGTGACATTCTAAACTGGATATCAGACTTT
CTCCATGATAGAACTCAATGTGTCGTTGTTCGAGGAACTTCATCTAAACA
TTCAGCAGTCATTTCAGGTGTCCCCCAAGGTACCGTTCTCGGCCCCCTCC
TGTTTCTCGCCTATATCAATGATATGCCATTAGAAACGAATTCAAAACTT
GCTTTATTCGCTGACGATTCTTACCTGTACCGGAAAATAATGTCATCCAA
AGATGCAGAACAACTGCAAAATGATTTAAATAAACTCGTTCTTTGGGAGC
AAAAATGGTCAATGGAATTTCATCCAGAAAAGTGCAAGCTGCTGAGGATA
ACAAACAAACGTAAGATCATCAACGCTGATTATCAAATCCATGGAAAAGA
GATTGAGAAAGTTGATAAAGCGAAATACCTTGGTGTGACATTGCAAAAAG
GTCTGTTGTGGAATACACATGTATCAAATATCTGTGCAAAAGCAAACAAT
ACCAGGTTCTTCCTACAGCGAAATCTTGTCAAGAGTAACCCAGCTAATGC
GgcttaaatgctttaaaatcttCGTAAGACCAACATTAGAGTATGCATCA
ACTGTTTGGGACCCAGCTGGAAATGAAACTTTAAAAgctaaaattgaaat
ggttCAGAGAAAGAGTTTGCGCTGGATCTACAGCTCGTGGCAACAGACTG
TAAGCCCAACAATGTTAAGAAGAAAAGCTGACCTTGAAACTCTAGACGAA
CGTAGATGCAGAGCTCGGGTAAAAATGCTACACGAAATATATCATTCAAC
AAAACAGGTAAATAGAGAAATGATACCAATAAAGCAAAGATGTGCTAATA
CAAAGTTTAACCCTATCCAAAGCAGGATAAAGATATACGCAAACTCTTTT
ACACCAAATACGGTGGGGCTCTGGAACAAATTACCAACAAAATTGACAAA
CATAAAAGACCTGGatgtttttaagaaagaaatggataaaatatcaatta
gcgatttttaatcctattaaaatattcaaaattttaaacattatcttatt
tatttttacccaCAATTGCGAATATGTAAACCTTTGTCAAGCTCTAACAA
ATTCACAAATCACTTCAGCTTTTCTCAACTTCTCGAGTTTACTTTCCTTC
GACTAACTATCAATGCCAGATTACACCCTTTCCAATATACTGAGCCACGG
AGGTAATGTTTTTAGATTAGAGgctaatatttttatctagatctttatat
gtacataataattgatttttactatttattacttattattttattatttc
tatatttatatattataaatttaggctacattcttaatatttttcatttt
attaatcatattttttgttacattggcGAGAATAACTTTGTATAAAGTTT
TTGCTaatcaaataatagaaatagaaatagaaacataATAGAAGACTGAG
TGTTTAGAAAATGGATTTAGGGATAGAAATCTCGATACCATACCATTGCA
ACCAACTGGGCGAGTTCCAGTggacttgaaataaaaatattttttggttt
acAACTGTTGGGTGGTTGAAATTGGCAATAAGATGACATAATTTAATAGG
TGCCTGTCAAACTATCATTTaccatttttattccaaatatACATCCTTTT
TGGATTTTCtatctgaaaattattttcatgtcCCCTCAGCTACTCTTTAG
GCTATCAAACTTTATTCAGCTTTTACTAGACGCCTGGTAAATTATTAAAA
GAGATTATCTACAAGTACAACAAAACAGTGTGCTTCCCGCGACGTAAACA
GTGAACAGTGCCAAAAGTGTCCAtatcatttgaaaatcattCAGCTGAAT
TTTTTCTTAGACAAGGCTCTTTACTTTTTCAGGAGCAAAATAACAGAAGA
TCTCAAAATGCTGCTCGATGTAGAGAAAGTATGCTTGCTCTtgctcaaaa
aatggacaaGTTAAATAAACATGAAACTGCCaaaaaaaCTGGAAATATca
acaatgaaaatattttggctaAAAGAGAATATTGTAAAATTGCATCTGAA
GTATCAATGCAATTCGAAACACTTTCCAGAAAGTACGAGAAGGATTTGTC
AAGCTCTTAA Coding sequence (CDS) from alignment at sc0000004_pilon:19046..24155+ >XLOC_036482 ID=XLOC_036482|Name=XLOC_036482|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=786bp|location=Sequence derived from alignment at sc0000004_pilon:19046..24155+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCAAATAACGTTTTCTGGTTTGACTGTGCTGCAAACGATGAGGAAAA
tgtgaacaaaacaaaaacatctaGACCAAAGTTATCCTCTGATAGAAAGC
CTAAAAAATGTAATTCAGTTGAAGAGATTCAGAAAAAGATTGACGAAGCA
AGTAAACGAAGAGAgATGTCAAATAACGTTTTCTGGTTTGACTGTGCTGC
AAACGATGAGGAAAAtgtgaacaaaacaaaaacatctaGACCAAAGTTAT
CCTCTGATAGAAAGCCTAAAAAATGTAATTCAGTTGAAGAGATTCAGAAA
AAGATTGACGAAGCAAGTAAACGAAGAGAgGAGCAAAATAACAGAAGATC
TCAAAATGCTGCTCGATGTAGAGAAAGTATGCTTGCTCTtgctcaaaaaa
tggacaaGTTAAATAAACATGAAACTGCCaaaaaaaCTGGAAATATcaac
aatgaaaatattttggctaAAAGAGAATATTGTAAAATTGCATCTGAAGT
ATCAATGCAATTCGAAACACTTTCCAGAAAGTACGAGAAGGATTTGTCAA
GCTCTTAAGAGCAAAATAACAGAAGATCTCAAAATGCTGCTCGATGTAGA
GAAAGTATGCTTGCTCTtgctcaaaaaatggacaaGTTAAATAAACATGA
AACTGCCaaaaaaaCTGGAAATATcaacaatgaaaatattttggctaAAA
GAGAATATTGTAAAATTGCATCTGAAGTATCAATGCAATTCGAAACACTT
TCCAGAAAGTACGAGAAGGATTTGTCAAGCTCTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000004_pilon | genome | sc0000004_pilon:19046..24155 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 166-393:4883 |
| Aaloc | 1-165:1 |
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