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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000159_pilon:774084..779107- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_036454 ID=XLOC_036454|Name=XLOC_036454|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5024bp|location=Sequence derived from alignment at sc0000159_pilon:774084..779107- (Clytia hemisphaerica_ch_hm2_pilon)
ATGATGAAGTTTTTCATTTTCACTTTACTGGCAGCTTATGTTGTCTGCCA
AAGTCCCGAAGAAGGTAAGAAATCAAAAGCCAGTTAAGGCACCTGCGTAA
TCCCTATAATTTCGAACAACATTGAATCTTAAATTATTTTTTAGGTTCAT
GATTTTCGAAGATTACATTTGGCTGGACATTTGAGAAAGTCTCTCTTAGT
AACGATTGCAAAAAGAGCTGGAAAATAGCAATTTTTATTAAACTACCGGT
CATACGATAGTCGATAAAAACGTTAAGAAATCTGAACAATATCCGAAGAA
ACGGCAATTTTTAAGATCTTGACGAGTCTGAAAAATGAAATAAGAACAAA
TAAGGAAAAATAGAAAAATACCATAATCTTTACAAAATCTGTACGGCTAA
GCCACGGTTATTCAGACTAAAATATCATTCATACAACTGCAATCAGATCA
ATATGCTACTTTTTTAAACTTATCTTTCTTAGGTGACATGGTTGAGGGAG
ACATTGAACTTGACCCTGACCAAATGGCCGCTTATATGGAACAAATGGAA
AAAGCTGGAAACTCTTTTGCTGCCATCAAATCAAACTTATGGAAGACCAA
CGGAAGAGCTGACAACATCAAATACTACATTGATTCTCAAATCAGTAAGT
CAGATAAGTATTATGGAATATTCTTATTGAATTAAATTGGCCCAGAAAAA
AAACCGTATACTTCCTGTTGAGGAGGTCCATCCCTCTGTGGCTTGAAATA
TTGTAACCCCCTGGAATTCTGGTCAATTTCAGGTTTAAAGCCCTCTGGAA
TTCTGAATTTTAGTAGGATTTAAAAAGCTGCCCCATTGAATTCCAGGTAT
TTTTGACAGATTTTTGTATCTCCCTATGGAATTCCGCCACATATCAAACC
TTGACCCCTTAGAACGGAAATGGACCTCCTCGACAGGGGGATACGGTTTT
TTCTGGAAAGGCCCAATTATGGTTCATATTTTAACAGTCTCGTAACCAAG
TTGCAGTAAGCTTGGCAAACTGCATTTTGGTAAAGGTTTTTATATGAACT
TCTTTTAACAATGATTACATTTTTAATAAGCAAGTGTTTCATATCAGGCT
AGCATTATGCTTAGCATTTTATATTGTTTTTAAACGATAAAGCCATTGTT
TAGGTACCAAGAATTAAGCCTGCATATGCTTATAAACGTTCAGTTTATAG
AAAGAAAATCATGTATTCATTTTTTATCTAAACTTAAGGTGGAGCAAGCA
GTGCTATCAGCCAAGCTATTGCTGATTACCAAAAATACACTTGCATCAGA
TTCTCCAGACAATCAAGAAGACCAAGTGGACCTCATCTCTTCTTCACCAC
TGGATCAGGGTAAGACTTTTTATCCCGGGGAGTACTAGAGTGGCGAGCTG
ACGGGTATGTGCAGCCTGACTTTCGACCCTTAGCGAGACTAAAAAGAAGA
AAAATAAGGAAAATTTCGCGAATTTTACGACCCTTAGTGGTAGTGGGTTA
ACTTTCTGTTTTTTTTTCAACCCTTACAGGCACTTTAAGGTCCTAAAAAA
GGCACCCTTAAGGGCGCCACATACCTGTACCCTTTACTTGCCAAAGTACC
CCCAGGGATTTTTATCAACTTCTCATAATCTACAGAATGAAAATTCACCT
GAGTGTTGAATAAGAAAACAGGGAAAGAAAAATTCAAGTCGACTTCAATA
GAGAAGAGTAGCACATTAGGATTCAAATCACTCTATTTCTAATTTAATAT
TACTTACGACTTTAGACAAAAAAAGGCTTAATAAGTACACGTCAAACTAG
TGTTCGTTTTTATCAGCCCCGGGGGGGGGGGGTACTAGGGCAAGATGGGT
TACGGGGATGCTCCGCTGGTCAGGGTACCTTTTTTAACCTCCACGAGTCC
CAGGTAGGGTCGCAAAAACACCAAAATAGAAAAATGAGTCCCTCGTAGGG
TGCCTATTTTTGGAAAATTTGGGGAAAATGTAGAAAATTTGAGAAAATTT
TGGAATTTCAGTCCCATTCAGGGTCACTTTTCTCGCAAATTTCGAGTCCC
ACGTAGGGTCCATTTTTCGAACCTCAGCGGAGCACCCCCGTCGGTCGACA
AGGGTAGTACCCCCCCCGGGTTATCAGCACCCTGAGTAAAGTATCATACT
TATGACTTTGGCAACGCTCTGCTTAGGGTCGAAAGAATTACCATATCCAT
TTTTTGGCTAGTGTTGAATTTTTTCACAGCAATGTATCTTAGAAATCTTC
AAAGATTCTTTTTTATTTAAAACACCTCATAGTTGCTCTTCACCAGTTGG
TCGAATGAGTAGAGGAAACAGCATCCGTCTTGCAAGAGGATGTTGGCGTA
AAGGAACAATCATTCACGAAATTGGACATTCAATCGGTCTGTTCCACGAA
CAATCAAGGTACAAACCCTTTGTTTTCAAACGATACAGTGGAGTATCTTC
ATTTCGAACCTTTATAACTTGAATGTCTCCTTAACTCGAACAAGTTTTAT
CGTCCTTTCGGTTAACTCTAACCTCACCCCTTAACAAATTTGTGTTCCAC
GTGCGTGATAGAGTTATGAAAACGCCACTGTAACAGAGTTTATGTCCTTT
GCTTATTCTAAAAACTTCAGCTGATCTTGCTGCATTTTGTTACGAATTCT
GATCAGGATTTCTAGCGGCTTTACATTGTACAGTTTCTTCAACTCGAACC
TTTATAACTCGAATGTCTCAACTCAAACAAAGTTTTCTCGTCCCTTCGGT
TAACAATGCCTTATAAACATTTAAAGAAGAAATTTTGTAATCCCTGTGCG
GGTTCGATTAATGAAGACTGTAATACATTTTCGTTATCTTTAATGAATTA
AGACGCTGTCACTTGTTCTTCTTCTGGAACGCTTTCTCGGTATATAAATT
ACGATTTCATTGACGAGTCTCCTTAAATCTTTTTAGACCTGACCGTGATA
ATTTCGTTACAATCAGATGGGAAAACATTAAAGAACGTAAGTTTACTATT
TTTTGTTTCTTGTTTACTTTGGTTAGCATCAATTTCACTAAAAAGTTAAA
AAATCAGCAGAAAATAAGGATTGGGTAAAAGTTCGGTAGCCTGGATATCC
AGACTGTTCCTTAATTAATTCACAGTCTAGTTTATTATATTTTTGTCTAC
CGTTACGGTCTGGTTTACCTATCTTGCCTGCATCCAAATCTGAGGATGAA
ATAATGATTGGTCAGTACGAACATTGAATGTGATGTGAATGAGCCCATCC
CGCCTTTTAAAGATTTTTGCAGGTTTTTTTGATACGCCAAATCGCTTCAA
TGAAAAATAATAATTTCCCCCTACCGCCCTCAAGGTAAAACCCTCAAAGA
AGTGCCCTCAATTAATTCTTGTTATATTTTTTTACTAACTTTGTATAGAA
AACAAACACAACTTCAACAAAATGAGAGCTTCCAACTGGAACAAACATGA
CACCAATTATGATTACGACAGGTGACTATTATCTTACTGACTACTATAGG
CGAGGTCAAATGAGTTGTTGTTTTTATCAGTAAATAGCGTTAGACTAATA
GCCTTCACCAGCCAACCGTGTGATTTTTTATTGAAAGTGAAATCTGTAAA
ATATTTTTCTTCTCAACTGATAATATTTAAAGGCCATCCAAATATGCCAT
TTTTCAAATGCAAAGGTTAAATTTTCAAAAAAAAAGGGAAAAAAAAAGGA
AAATTGAAGAAAAAAGCGTGGCAGATGAGTTTTGTTCGCCATTAAATATT
TAATCCAACACACTTGCAGCGAGATAAAAACCTTAACATTCCGAAGGTTA
CAACGTTTTTAGTTTTTCATCCAACATTTCATTCAACACTGGATAATAAA
ATGTTTGATGAAATATTGGACTGGTTTGCCCTGGCTTTAATGTTTACATT
CCCTGTTTCATCATAGTATCATGCATTACGGATCCAGATACTTTACAAAG
AACGGCGGATTAACCATTCAGACAAAGAACTCTGCGGATCAAACTCGAAT
TGGAAAGCGATCTGGATTTTCGGAAACAGACAAAATCCAAATCAACAGAA
TGTACTGCCAAGGTTAGTGATTATTTTTATTCCTAAGTAAGTAAGTCTAC
GACCGCACACGGAGGCCACCCGAAGGCTCCTCTTTCGATAGCTATCTACC
CGAAGGTAGGGGAGGGCTCCACTCTTTCTCCCTGGATTGCTCCACTTACC
CTTGACTTTTCTCTTAATTACTGAGCATCAAGCAGAAAGGCATGAAGTAC
CATTTTAAGAATCTTTGGTATAACCCGGCTGGATGTTGAACCTACAACCT
TGCTAACCGTAGCCGGATGCTCTACCACTGCACTACGGTCATTTTATTCC
TCAAGTGTTTGTTAACCCCCAACCGTGGTACAAAGACTTTGCGCACTCAC
GCGTCCGTTTTTTATGATGTTGTTCTTTTTAAGTTTTCAGTAACAAGTAG
AAAGGCTTTTGCAGCGTTGTGATTGCCAATTTGTTAAAAGTTTCATCTCT
ATCTGTTGGCCGAGCAGACTATACCCCTGTGTCACAGACACGCTGGGACC
CCGGCCCCACAGGAAAGATTGACAAAAATTTCGTCCCGGGTGGGGAGATA
CCTTAGAATTTCAGCCCCACTTGGAAATTAACTTTTAATTCATCCCCTTT
CGAAATTCAATGTTTAAAAACTGCAATTCGAAACCATTGCCACTGAGTTT
TTAAACGTCGGGAATTTCTATCTCCATTGGGATTTCAATAGAGATTTTTA
TCCCCACAGAGAAAAAAGTTCCACCGGGGCTGTGAGACAGGGGTGTTAGA
CTATACACCTAGCTATTTCATAAGGTTGTTCTAACGTTTATAACATTGAC
GTTGTGAACATTAGATAAACATTGAAACAACATTATGTGTCAATTCGAAC
TCTTTATTCTTTCAAAGGATCAACATGTGCTGACAAAGATTCCCGATGCA
GTGGTTGGACATCCTATTGTCGTACCAACAATTTTGTCAAAACAAATTGC
AAGAAAACATGTTCGTTATGCTAA Coding sequence (CDS) from alignment at sc0000159_pilon:774084..779107- >XLOC_036454 ID=XLOC_036454|Name=XLOC_036454|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1698bp|location=Sequence derived from alignment at sc0000159_pilon:774084..779107- (Clytia hemisphaerica_ch_hm2_pilon)
ATGATGAAGTTTTTCATTTTCACTTTACTGGCAGCTTATGTTGTCTGCCA
AAGTCCCGAAGAAGATGATGAAGTTTTTCATTTTCACTTTACTGGCAGCT
TATGTTGTCTGCCAAAGTCCCGAAGAAGGTGACATGGTTGAGGGAGACAT
TGAACTTGACCCTGACCAAATGGCCGCTTATATGGAACAAATGGAAAAAG
CTGGAAACTCTTTTGCTGCCATCAAATCAAACTTATGGAAGACCAACGGA
AGAGCTGACAACATCAAATACTACATTGATTCTCAAATCAGTGACATGGT
TGAGGGAGACATTGAACTTGACCCTGACCAAATGGCCGCTTATATGGAAC
AAATGGAAAAAGCTGGAAACTCTTTTGCTGCCATCAAATCAAACTTATGG
AAGACCAACGGAAGAGCTGACAACATCAAATACTACATTGATTCTCAAAT
CAGTGGAGCAAGCAGTGCTATCAGCCAAGCTATTGCTGATTACCAAAAAT
ACACTTGCATCAGATTCTCCAGACAATCAAGAAGACCAAGTGGACCTCAT
CTCTTCTTCACCACTGGATCAGGGTGGAGCAAGCAGTGCTATCAGCCAAG
CTATTGCTGATTACCAAAAATACACTTGCATCAGATTCTCCAGACAATCA
AGAAGACCAAGTGGACCTCATCTCTTCTTCACCACTGGATCAGGTTGCTC
TTCACCAGTTGGTCGAATGAGTAGAGGAAACAGCATCCGTCTTGCAAGAG
GATGTTGGCGTAAAGGAACAATCATTCACGAAATTGGACATTCAATCGGT
CTGTTCCACGAACAATCAAGTTGCTCTTCACCAGTTGGTCGAATGAGTAG
AGGAAACAGCATCCGTCTTGCAAGAGGATGTTGGCGTAAAGGAACAATCA
TTCACGAAATTGGACATTCAATCGGTCTGTTCCACGAACAATCAAGACCT
GACCGTGATAATTTCGTTACAATCAGATGGGAAAACATTAAAGAACACCT
GACCGTGATAATTTCGTTACAATCAGATGGGAAAACATTAAAGAACAAAA
CAAACACAACTTCAACAAAATGAGAGCTTCCAACTGGAACAAACATGACA
CCAATTATGATTACGACAGAAAACAAACACAACTTCAACAAAATGAGAGC
TTCCAACTGGAACAAACATGACACCAATTATGATTACGACAGTATCATGC
ATTACGGATCCAGATACTTTACAAAGAACGGCGGATTAACCATTCAGACA
AAGAACTCTGCGGATCAAACTCGAATTGGAAAGCGATCTGGATTTTCGGA
AACAGACAAAATCCAAATCAACAGAATGTACTGCCAAGTATCATGCATTA
CGGATCCAGATACTTTACAAAGAACGGCGGATTAACCATTCAGACAAAGA
ACTCTGCGGATCAAACTCGAATTGGAAAGCGATCTGGATTTTCGGAAACA
GACAAAATCCAAATCAACAGAATGTACTGCCAAGGATCAACATGTGCTGA
CAAAGATTCCCGATGCAGTGGTTGGACATCCTATTGTCGTACCAACAATT
TTGTCAAAACAAATTGCAAGAAAACATGTTCGTTATGCTAAGATCAACAT
GTGCTGACAAAGATTCCCGATGCAGTGGTTGGACATCCTATTGTCGTACC
AACAATTTTGTCAAAACAAATTGCAAGAAAACATGTTCGTTATGCTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000159_pilon | genome | sc0000159_pilon:774084..779107 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 745-849:106 |
| Aaloc | 598-741:1108 |
| Aaloc | 526-594:1625 |
| Aaloc | 475-522:2088 |
| Aaloc | 349-471:2742 |
| Aaloc | 229-345:3785 |
| Aaloc | 67-225:4541 |
| Aaloc | 1-63:5025 |
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