XLOC_036433 (mRNA) -

Overview
NameXLOC_036433
Unique NameXLOC_036433
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000017_pilon:84451..85446+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_036433 ID=XLOC_036433|Name=XLOC_036433|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=996bp|location=Sequence derived from alignment at sc0000017_pilon:84451..85446+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGTGatataattgaaataaaaatagaagAAGATGTAATCGAAACCGA AGAAAATGAGTTTCCACAAACATTATCATTGATTGTGAAGAAGGAAATTG TTGTTTGTGATAGAGTATCAAGTATTCCAATGGTTAAAAtcgaatgcaat gatggaacaGAATCAAACGAAAAAGCACCAGGGTTGAAGTATGGAGAACA GTCTAAAACTGACGCGTTCAAGAAGTTTAAGTGTTCCAAATGTTTTATAA GTCTTAAACGTAAAAGAGATTTAATAAAACATCGTCAAATGGTCCACGGT AGAATTAAGCTTTTCAAATGtaaagaatgtggtaaatgttttACATTGAG AGTTAAACTTAATGTACATCGAAATCGTGTCCacaatcaaaagaaatcat ttaGGTGTCAGGAATGTGGTGAAACTTTTACACACAAAACTTACCTTGAG GAACACAAACGATCCTTACATGGAGCTGCAAACCATATAACTACCAAGAA AACTGCATTGTCCATTGAAAAGAAGATTAAACATAAACATTTTGAATGTC AaaagtgtggtaaatcttttgctTGTAAGAGATCATTAATGAAACATCAA TTAATTCACACTGGCAGTGACTCGCCATGTATGGACAATCTTCCTGATCA TACTCACGAGAACTTAAAAGCTTTCATATGTAAGACATTTAAATCAAAGA AGAAGCTGAAAAAACACGTTGACAGAGTGCATAAGAAGATAAGACCACAC GTGTGCGATGAATGTGGTAAAGGTTTTACCATGCAATATGAAGTTAAAAA ACACCAGGATGCTGTTCATAAAGGTATAAAGCCGTTTgaatgtcaagaat gtggtaaattcTTTGCTACAAAGGGAAATTTGGCGAGGCACCAAAGAACA GTCCATGAAGGTATTAAGGCATTTGAATGTCAAGAATGTGCTCAAAGTTT TGGGCAGAAAACGACCTTAACTTTTCATCAAAGAACAGTTCATGAA

Coding sequence (CDS) from alignment at sc0000017_pilon:84451..85446+

>XLOC_036433 ID=XLOC_036433|Name=XLOC_036433|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1912bp|location=Sequence derived from alignment at sc0000017_pilon:84451..85446+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGTGatataattgaaataaaaatagaagAAGATGTAATCGAAACCGA
AGAAAATGAGTTTCCACAAACATTATCATTGATTGTGAAGAAGGAAATTG
TTGTTTGTGATAGAGTATCAAGTATTCCAATGGTTAAAAtcgaatgcaat
gatggaacaGAATCAAACGAAAAAGCACCAGGGTTGAAGTATGGAGAACA
GTCTAAAACTGACGCGTTCAAGAAGTTTAAGTGTTCCAAATGTTTTATAA
GTCTTAAACGTAAAAGAGATTTAATAAAACATCGTCAAATGGTCCACGGT
AGAATTAAGCTTTTCAAATGtaaagaatgtggtaaatgttttACATTGAG
AGTTAAACTTAATGTACATCGAAATCGTGTCCacaatcaaaagaaatcat
ttaGGTGTCAGGAATGTGGTGAAACTTTTACACACAAAACTTACCTTGAG
GAACACAAACGATCCTTACATGGAGCTGCAAACCATATAACTACCAAGAA
AACTGCATTGTCCATTGAAAAGAAGATTAAACATAAACATTTTGAATGTC
AaaagtgtggtaaatcttttgctTGTAAGAGATCATTAATGAAACATCAA
TTAATTCACACTGGCAGTGACTCGCCATGTATGGACAATCTTCCTGATCA
TACTCACGAGAACTTAAAAGCTTTCATATGTAAGACATTTAAATCAAAGA
AGAAGCTGAAAAAACACGTTGACAGAGTGCATAAGAAGATAAGACCACAC
GTGTGCGATGAATGTGGTAAAGGTTTTACCATGCAATATGAAGTTAAAAA
ACACCAGGATGCTGTTCATAAAGGTATAAAGCCATGAGTGatataattga
aataaaaatagaagAAGATGTAATCGAAACCGAAGAAAATGAGTTTCCAC
AAACATTATCATTGATTGTGAAGAAGGAAATTGTTGTTTGTGATAGAGTA
TCAAGTATTCCAATGGTTAAAAtcgaatgcaatgatggaacaGAATCAAA
CGAAAAAGCACCAGGGTTGAAGTATGGAGAACAGTCTAAAACTGACGCGT
TCAAGAAGTTTAAGTGTTCCAAATGTTTTATAAGTCTTAAACGTAAAAGA
GATTTAATAAAACATCGTCAAATGGTCCACGGTAGAATTAAGCTTTTCAA
ATGtaaagaatgtggtaaatgttttACATTGAGAGTTAAACTTAATGTAC
ATCGAAATCGTGTCCacaatcaaaagaaatcatttaGGTGTCAGGAATGT
GGTGAAACTTTTACACACAAAACTTACCTTGAGGAACACAAACGATCCTT
ACATGGAGCTGCAAACCATATAACTACCAAGAAAACTGCATTGTCCATTG
AAAAGAAGATTAAACATAAACATTTTGAATGTCAaaagtgtggtaaatct
tttgctTGTAAGAGATCATTAATGAAACATCAATTAATTCACACTGGCAG
TGACTCGCCATGTATGGACAATCTTCCTGATCATACTCACGAGAACTTAA
AAGCTTTCATATGTAAGACATTTAAATCAAAGAAGAAGCTGAAAAAACAC
GTTGACAGAGTGCATAAGAAGATAAGACCACACGTGTGCGATGAATGTGG
TAAAGGTTTTACCATGCAATATGAAGTTAAAAAACACCAGGATGCTGTTC
ATAAAGGTATAAAGCCGGAAATTTGGCGAGGCACCAAAGAACAGTCCATG
AAGGTATTAAGGCATTTGAATGTCAAGAATGTGCTCAAAGTTTTGGGCAG
AAAACGACCTTAACTTTTCATCAAAGAACAGTTCATGAAGGAAATTTGGC
GAGGCACCAAAGAACAGTCCATGAAGGTATTAAGGCATTTGAATGTCAAG
AATGTGCTCAAAGTTTTGGGCAGAAAACGACCTTAACTTTTCATCAAAGA
ACAGTTCATGAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_036433XLOC_036433-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000017_pilongenomesc0000017_pilon:84451..85446 +
Properties
Property NameValue
Aaloc835-951:880
Aaloc1-831:1