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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000017_pilon:378580..381150- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_036422 ID=XLOC_036422|Name=XLOC_036422|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2571bp|location=Sequence derived from alignment at sc0000017_pilon:378580..381150- (Clytia hemisphaerica_ch_hm2_pilon)
ATGACAGAAAATCAAGAATCGCAGAAAGATGAGATCGAAGCTTTGACTTC
CATATATGGTAAAGACTTTTCCTTATTAGGAGAAAATACATTCGATTTGA
GGATATGTTGCGATGACATCAAATGGTGGGCTGTCACTGTTTCTGTTCTG
TTGCCAGAGAATTATCCAAGTGAAGAAGCACCTCTCTATGAAATACACAC
TGAATGCCTAGCAGGTTTGTAAAGTGCTTATTTTTTACTTAGTTATTGTT
GCCTCGGTATATGTTCTAGTCTGCTCATTTTTAAATGTTATAGTCTTTAT
TTGGACTTGATTGCAAAGTACAAATTTGAACTTAGCTTTGAAGGTAAGAG
AGACGATTTCTTCGAAATTTTTAAAGTACTAAAGTGAATTTAGACTGATT
TTCTTGTGACGTAACCTTAGACTATCTGCGCCAAATGTGAATAATTTTCG
GAATTAGTGTACATCAAATCATGGAGGTACAAAGAAAAACAGGAGAAGTA
TGCTATTGTAACCAAGCTCGCCCTACGATTGAAGAAGTTACGAGGTTTGC
ATGATCATAATCTCATGTATCGTGCATTTTTAATGAGCTCTTTTGTCAAT
TGGTGAAATCTAATTGGCCATTTTCAGTTTTAGAAATTAGATGAGCTGAG
ATCCATTGTTTCTGACTTTGATGTAAGAAAATATTTTGACTAAAAAAAGG
CCTGTAAACTTGACAATCCTTCATCAAATGACAAGGTTTTTCAGTTAATG
TTTTCTTCAATGTGAGCTCAATTGCTTGATATTCTCCAGCGACTTTTTGT
CTAAAAATTGATTCTGAAATCGCGTGTGCTTATAAATAACTTTCCATTTT
CTATCTTAAGAAAATATATTTTCGAAACAAAATTTAACGGATAACGAAAT
GGCACATAAACTTGTTTTGTGGGGCTAAGTTTTATTTAATTCTCGTATAT
TAGAAAGCTAATATCTTCAATACTGATAGTTAGAATGTTCCGAGCAAACT
TGAGTTCTACTAAAGAGTCTTTTTTCATCCGGCGAGCTTAGAATTTCTTT
TGATACATTTTATAAAAGAAATCAAAAGACTTTAACGACCAATTACCGAC
AAATTAAACTCCTATTTTTCTTTAAACCTCCATGATAAAATGTTCACTCT
CCTGTGCTAGGACTTTTAAAACCGCCAATCTTCTCGGAGAGGATCCGAAT
CCGAATCCGAATCCTCTATAAAACCGCAGATAGTATAGGGAGCACGAATC
CGTTAGTGGATGCCAACCAATGAAATATAAGCCGGAAGGGCTAGAATCGA
ATTTTAACCTTTCTCAGGCAAGAAAAAGTAAAACCTTAAATTGTACGCCG
TATTTTTTTATTACGAATTGGATTTAGCGATTTCTTTGTTTGTTTGTTTG
TTTGTTTTTGAAATATAGCGAAAATTTTTACTTTCCATCCGGAATTTGTA
TAAAAACCACACGGAACGCTTAAGGCCGCACAACTTTGGTAGGATTTGTT
GGCTTCAAATCCTACCAAGGAGATTCGATTCTAGCTCTTCGGGCTTATAC
TTCATTGATACCAACAGCCTTGGATAAAAAATCTCCCATGTTGCATTCTC
ACCAACTAAATTCTTCCAAACCAATTCTTCTTAGGTTCTGAGCTAGGTGA
ACTCCAAAATGAACTGGACAACATTTGGCAAGAGAATATTGGAACGAACG
TGCTATACATGTGGACTGAGAAAATACGTGAATATCTTTTCGAACGCTAC
GAACGCGCTAAGTTGTTCATCGAATCACCCGAAGAAGATAAACAGCGTGA
ACGTAAGTAGAAGCTCTGTTTGTAGGTCATTTTATATTTCACGGTTGTGT
TTTGAGGACATCAACAAAGCCAGTATCTCAGAACTGCAACTTTCCCGTCT
GAGACGGAAGTCCGGCTGGATGAGATTCTTCACTAGCACCGTCCTAGTTG
ACGATGCTATCGTCCGTTTTAGAGGGTCAGTAACCGTGGGAAAATATATA
AGCTATGCAGGGCGTCAGGGCGGTTTACAGGAAGAAAGTGGCGGTAGAGT
TTAGATTTTAGCAAAATTGGTTGTAGTATACCAAGTATATTCCCATCTAA
AGATGCCTTGTCAGGTTCCTCACAGAAACGCCGGATTGCAAGTAAAATCT
AGCTCGAGAATTAAAAAATGCACCGCTCGAAAATAATAAAAAAAAACTAG
ATTCAACCCGTCGTCATGATTGCGGTGCACATCTTAGGATTTCACTTTAT
CTTACCTTGAAAAACGAAGATTTCTTTTATTTATTCCCAGGAGCTTTAAC
AGACCTTATGCGTGAGGAGGATGCAAGCGAACAAATCGAAACGCAAGACG
TACCACAAAAAGAAGAAGAGACTTCGACTCAGGTTATGGATGAAACAGTC
CCTGAAATTCACAGTAGCGACACGATCACGTTGAAGAAAAGTACTTTCCA
AGGACATTCAGCCGTGGTTCATACACTTACTGATATTAGTGAGGTTAAGC
ATACAAGGATAATCACGACGACGGACGAAAAATGTATAAGGCTAGTGAAA
ATACGAAATTTGATTGGTTGA Coding sequence (CDS) from alignment at sc0000017_pilon:378580..381150- >XLOC_036422 ID=XLOC_036422|Name=XLOC_036422|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1326bp|location=Sequence derived from alignment at sc0000017_pilon:378580..381150- (Clytia hemisphaerica_ch_hm2_pilon)
ATGACAGAAAATCAAGAATCGCAGAAAGATGAGATCGAAGCTTTGACTTC
CATATATGGTAAAGACTTTTCCTTATTAGGAGAAAATACATTCGATTTGA
GGATATGTTGCGATGACATCAAATGGTGGGCTGTCACTGTTTCTGTTCTG
TTGCCAGAGAATTATCCAAGTGAAGAAGCACCTCTCTATGAAATACACAC
TGAATGCCTAGCAGATGACAGAAAATCAAGAATCGCAGAAAGATGAGATC
GAAGCTTTGACTTCCATATATGGTAAAGACTTTTCCTTATTAGGAGAAAA
TACATTCGATTTGAGGATATGTTGCGATGACATCAAATGGTGGGCTGTCA
CTGTTTCTGTTCTGTTGCCAGAGAATTATCCAAGTGAAGAAGCACCTCTC
TATGAAATACACACTGAATGCCTAGCAGGTTCTGAGCTAGGTGAACTCCA
AAATGAACTGGACAACATTTGGCAAGAGAATATTGGAACGAACGTGCTAT
ACATGTGGACTGAGAAAATACGTGAATATCTTTTCGAACGCTACGAACGC
GCTAAGTTGTTCATCGAATCACCCGAAGAAGATAAACAGCGTGAACGTTC
TGAGCTAGGTGAACTCCAAAATGAACTGGACAACATTTGGCAAGAGAATA
TTGGAACGAACGTGCTATACATGTGGACTGAGAAAATACGTGAATATCTT
TTCGAACGCTACGAACGCGCTAAGTTGTTCATCGAATCACCCGAAGAAGA
TAAACAGCGTGAACGAGCTTTAACAGACCTTATGCGTGAGGAGGATGCAA
GCGAACAAATCGAAACGCAAGACGTACCACAAAAAGAAGAAGAGACTTCG
ACTCAGGTTATGGATGAAACAGTCCCTGAAATTCACAGTAGCGACACGAT
CACGTTGAAGAAAAGTACTTTCCAAGGACATTCAGCCGTGGTTCATACAC
TTACTGATATTAGTGAGGTTAAGCATACAAGGATAATCACGACGACGGAC
GAAAAATGTATAAGGCTAGTGAAAATACGAAATTTGATTGGTTGAGAGCT
TTAACAGACCTTATGCGTGAGGAGGATGCAAGCGAACAAATCGAAACGCA
AGACGTACCACAAAAAGAAGAAGAGACTTCGACTCAGGTTATGGATGAAA
CAGTCCCTGAAATTCACAGTAGCGACACGATCACGTTGAAGAAAAGTACT
TTCCAAGGACATTCAGCCGTGGTTCATACACTTACTGATATTAGTGAGGT
TAAGCATACAAGGATAATCACGACGACGGACGAAAAATGTATAAGGCTAG
TGAAAATACGAAATTTGATTGGTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000017_pilon | genome | sc0000017_pilon:378580..381150 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 385-663:280 |
| Aaloc | 217-381:936 |
| Aaloc | 1-213:2572 |
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