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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000017_pilon:84493..90773+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_036399 ID=XLOC_036399|Name=XLOC_036399|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6281bp|location=Sequence derived from alignment at sc0000017_pilon:84493..90773+ (Clytia hemisphaerica_ch_hm2_pilon)
GAAACCGAAGAAAATGAGTTTCCACAAACATTATCATTGATTGTGAAGAA
GGAAATTGTTGTTTGTGATAGAGTATCAAGTATTCCAATGGTTAAAAtcg
aatgcaatgatggaacaGAATCAAACGAAAAAGCACCAGGGTTGAAGTAT
GGAGAACAGTCTAAAACTGACGCGTTCAAGAAGTTTAAGTGTTCCAAATG
TTTTATAAGTCTTAAACGTAAAAGAGATTTAATAAAACATCGTCAAATGG
TCCACGGTAGAATTAAGCTTTTCAAATGtaaagaatgtggtaaatgtttt
ACATTGAGAGTTAAACTTAATGTACATCGAAATCGTGTCCacaatcaaaa
gaaatcatttaGGTGTCAGGAATGTGGTGAAACTTTTACACACAAAACTT
ACCTTGAGGAACACAAACGATCCTTACATGGAGCTGCAAACCATATAACT
ACCAAGAAAACTGCATTGTCCATTGAAAAGAAGATTAAACATAAACATTT
TGAATGTCAaaagtgtggtaaatcttttgctTGTAAGAGATCATTAATGA
AACATCAATTAATTCACACTGGCAGTGACTCGCCATGTATGGACAATCTT
CCTGATCATACTCACGAGAACTTAAAAGCTTTCATATGTAAGACATTTAA
ATCAAAGAAGAAGCTGAAAAAACACGTTGACAGAGTGCATAAGAAGATAA
GACCACACGTGTGCGATGAATGTGGTAAAGGTTTTACCATGCAATATGAA
GTTAAAAAACACCAGGATGCTGTTCATAAAGGTATAAAGCCGTTTgaatg
tcaagaatgtggtaaattcTTTGCTACAAAGGGAAATTTGGCGAGGCACC
AAAGAACAGTCCATGAAGGTATTAAGGCATTTGAATGTCAAGAATGTGCT
CAAAGTTTTGGGCAGAAAACGACCTTAACTTTTCATCAAAGAACAGTTCA
TGAAGGTATAAAGCCTTAtaaatgtcaagaatgtggtaagtGTTTTGCTA
GAATGAGTTGTTTGAACCAGCATCAATTAACAGTTCATGACGGGATAAAG
GATTTTGAGTGTCAGgaatgtggtaaatgttttGCTACAAAGAGTTATTT
GAAGCAGCATAAATTAACAGTTCATGACGGGATAAAGGCTTTTGAGTGTC
AggaatgtggtaaatcttttggaCATAAATCGAACTTAACTATGCATCAA
AGAACTGTTCATCTAGATTAAAAGACCTTAAATATCAATAATCCACATTA
AATATCTTGCTACAAAGAGAAATTTAGAGAGTCATCAATTTAACAGTTCA
TGGTAAAACCTTTTCAGTGTCAAAactatggaaattttttttaatgagaa
agGTTCGTtataaaaacatcaaagaaaagcacATGATAAAATCTAACCTT
TTCAATGTCATAGATGTGGTCAGTCTTTTGCATTTAGATGCGTCAAAAGG
ATGTTAACGAGAGAATGAAAGCTTTTACGTGTGAAAGTGTTGCAAACCTT
TTGCAgggaaaactaatttgaagacgCACCAAACAACAGCCGGCAAGGCG
ATTAGAACATTTTTGGATCTTAAAAACGAAAATCTCATTGAATCTCAATG
CCATTGACAAAGAGCTACCTATGCTGCCTTCAACAGAGCTTTCTCCTTAC
AAGCTGGAACAGATGATAATGCGCTGcaaatctttctcaaaaacattcaa
aaatttgatAAGTTACCAAGTTAACAAACAAAGCTATATTTTCTCTTAAA
TTGTGCTTTTTTggtcaacttttcaaaatcataGGTGTATTTTAATCATG
AAGACAGTCATAGTTATGTCAACAATGTTATAAGCAAATTACAATTTTTG
CTCTGAAATACTTGTAACATCTGAGGTTAAAAGTTTTTGGatcgaaaagt
ttttcaaaattttatattgttAAATACCGTCAATCCTCAAATAAGTGCTC
Tgacgcttatttaatttttcaggctctaaggggggcggcgcttattcaag
cggggcgctaaaatttttcatttcagaaattcgtatatcaacaaattcgg
aatctgcttaaacttaactttttcaaaaaaggttggtttttcaaaaaagg
atgaataaaagaataattggaaaaatccaattgacaatgtctatcatttt
attcttaatcgctttctttcttttaaagacacaagtatctactcaatatc
ttattcaatcaataacaatattcaatcaataacaatattcgaATAAGCGC
ACTTCATTTTTGTATCGGAGATGCTTCAATATTACAAAGTCATTAatgcg
aaaaaaaagaaaaattaaataaagttTATTCAATCAAAAACTACACTTTA
AAACTTCTTCATTTCGGaactttatttacatttttattttcatcaatacT
CCAAAGTAAACAATTTGGGCCGtcgttttttaaatttcatctaCAATTTA
ACTTGAGGACTGCTTTAAATCTTTTCAAACATAATAATTTCAATTCTGTT
actgtatttttcttttatcttagagcattttgtttaaatgaaatgaatga
gattgaagaaatagaaataaaaattgaagaagaagaagatcatGGTTGTG
ATGAAACAATTCATAATAATttggaaattattatcaaactGGAAAATGAA
TCAATTGGATTTCCAGACGACGCAATTTTGGAACCATTAAAAAACCATGA
AAGTGAACTTTTTAATAATTCTTGTAGAAATGTAAAGGGGAACGATGTTA
CTTCAACCGAAGAAACTGAccccaaaaattataaaatcgcCATTAAACTT
GAAGATGAGTTAAAATCTCTAGATGATAAGAATCAAAGTGTAGTAAATAT
TAACGATGGAACGAATTGTTTTGATCAATTTTCACTGATTAAGGAAATGA
ATTCACAGATCGGTGAGGAAATCACTATTAAATTTGAAgataaattgttt
caaaaccatgaaaatgaaaataagcaGGAATGTTTTGAGGCTGACAAGAT
CGAAAATCCAAACATTGACGAAATAACGAAAAGTTCGGTTAAAGAACATC
AAAGAACGATATATCATAAACCTTTtaaatgtcaagaatgtggtaaatct
tttgctACAAAGAGAAATTTGTTGAGGCACCAAAGAACAGTCCATCAAGG
TATAAAAGCCTTtaaatgtcaagaatgtggtaaatgtttCGCAGAGAAAA
GGAAATTAACTTCTCATCAAAGAACTGTTCATCAAGGTATAAGGCTTTTT
AAATGTCGAGAATGTAGTAAATCTTTTGCTACAAAGAGTTGTTTGGTGAG
ACACCAAAGAACAGTCCATCAAGGTATAAAGGCATTTgaatgtcaagaat
gtggtaaaactTTTGGACAGAAAACGAACTTAACTTCCCATCAAAGAAAT
GTCCATCAAGGTATAACGGCCTTTAAATGTCAggaatgtggtaaatcttt
tggaCAGAAAACGAACTTAACTTCCCATCAAAGAACTGTCCATCAAGGTA
TTAAGGCATTTGAATGTCAAGAATGTGCTAAATGTTTTGGGCAGAAAACG
AACTTGTCTTCCCATCAAAGAACTGTCCATCAAGGTATAAAGGTGTAAAT
TGTCGAaaatgtggtaaatcttttagaCAGAAAACGACTATAACCTCGCA
TAAGAACTTAACTTCGCATTAGAGTACTGTCCATCGAGGTATAAAGTCTT
Ttaaatgtcaagaatgtggtaaatattttttagaaaaagaaattgaactt
cTCATCAACGATTTGCCCATCAAGGTATAAGAGCCTTTAAATGTcctgaa
ttttttaaatgttttgtagagaaaagaaacttaattttTCACCAAAGAAT
TGTTCATGAAGTTGTAAAGGCTTCTAAATGTCAAGATTgtggtaaatatt
ttgaatggAATATAAACTTCTCATCAAAGGATTGTCCATCAAGGCATAAA
GGCATTTGATTCTCATTAATGTGGTAAATCTTTCGGGGATAAAAGTAACT
TTTTAAGGCTCATCAAGAAAATGTTCACGATagaataaaactttttaaat
gttaagaatgtggtaaatcttttgcaCGGAAAAGTCATTTGAAAGCACAT
CAAAGAACAGTGTATATGATATGAAATCACTTGAGTGTCATTAATGTGGT
AATTGTTTTTGAGACAAAAGTTTGAtaaagaaacatcaaaaacagTCCAT
GATAAAACTTTgcagttttttttggaattttttttttggttgtaaaaatc
ggattttcttattttggggaaattccctcaTGTCATATTTAGGGCAAAAG
AGGATTACTCGCGATTGGATTGATtctcttttatcattttttgcactttg
atgtaaaatggtaatatttaaaatttgatgaagcctaattttcaaataat
aatttttttgggcaaatatgggccaaaatgtgcctaaaaTTGGGCTTTCT
GGACtatgtgaaattgcttcatttagTTTGTTCATTTAGTTCTCCCTTGT
GGttatccatatagtacgtactcaaaatgtttttaaatattcgATACCCC
CTTCCCCCTTGTACATAgtgaacaatagaaatgacgtcattaaagcAATA
GACATAcgccccctctcccccttcactgcgtacgtactatgtggatggcC
CCTTTGAACTTCCAGCTTCAAATAATTTTACGTCTACTGTATTTGTCTGT
ATCagattcatatttttcttttacttacTTTATTTTCAGAGATAACGCAA
CTAAATAATAATGAGTGatataattgaaataaaaatagaagAAGATGTAA
TCGAAACTGAAGGAAATGAGTTTCCACAAACATTATCATTGACTTTGAAG
GAAGGAATTGTTGTTTGTGATAGAGTACCAAGTATTCCAATGGTTAAAAT
CGAATGCAATGATGGAGCAGAATCAAACGAAAAAACACCAGGGTTGAAGT
ATGGAGAACAGTCTAAAACTGACGCGTTCAAGAAGTTTAAGTGTTCCAAA
TGTTTTATAAGTCTTAAACGTAAAAGAGATTTAATAAAACATCGTCAAAT
GGTCCACAGTAGAATTAAGCTTTTTAAATGtaaagaatgtggtaaatgtt
ttACATTGAGAGTTAAACTTAATGTACATCGAAATCGTATCCACAATCGA
AAGAAATCATTCAGGTGTCAGGAATGTGGTGAAACTTTTACACACAAAAC
TTACCTTGAGGAACACAAACGATCCTTACATGGAGCTGCAAACCATATAA
CTACCAAGAAAACTGCATTGTCCATTGAAAAGAAGATTAAACATAAACAT
TTCGAATGTCAaaagtgtggtaaatcttttgatTGTAAGAGATCATTAAT
GAAACATCAATTAATTCACACTGAAAGTGACTCGCCATGTATGGACGATC
TTCCTGATCAAACTCACGAGAACTTAAAAGCTTTTATATGTAAGGAATGT
GGTAAGACATTGTCATCAAAGAAGGAGCTGGAAAAACACGTTGACAGAGT
GCATAGGAAGATAAGACCACACATGTGCGATGAATGTGGTAAAAGTTTTA
CGATGCAATATGAAGTTAAAAAACACCAGGATGTTGTTTATAAAGGTATA
AAGCCGTTTgaatgtcaagaatgtggtgAACGTTTTACATATAACAAATA
TCTTCAAAGGCACTCGTTGAAACATAAAGGAATTAAACCCTTTAAATGCG
ACCAGTGTTCTGCGAAATTCATAACAAAGTATTCCCTTACCTCTCATGTC
AATATCGTTCACAAAAAACTGAAACCTTTCCATTGTACTCAGTGTAGTAT
GAAGTTTTCTATGAGTGCAGGATTGAAACGTCACATCAACGCAATACACA
AGAACCTTAAACCATTCAAATGTAATACTTGTGATACAGATTTTTCACGC
AAAGACCATCTTCAATTACACCAAGACACTGTTCATAAAGGACTTAAAAA
ATATTCCTGCGATCAGTGTGGTGTTAGTTATGGATGCAAATCTTATCTTA
AACAACATATAGACTTTGTCCATAAAAAATTAAAGCCACTTAAATGCCAT
GAATGCGACTCTAAATATAGTAGAAAGAGAGATCTCGATGCTCATATCAA
TACAGTACACAAGAAGATCAAATCTTTTAAGTGTGAAATTTGTGGAGACC
GTTTCAGCCAAAGTAGTTGTCTCTACAGACACCAACAAATTCATAAAGGG
ACAAAATTCTCATGCAATGTTTGTGGTAATTCCTTTTCAAGGAAAGATAG
TCTGAAGAAACACATGGAAACTTGCGAGTAG Coding sequence (CDS) from alignment at sc0000017_pilon:84493..90773+ >XLOC_036399 ID=XLOC_036399|Name=XLOC_036399|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2934bp|location=Sequence derived from alignment at sc0000017_pilon:84493..90773+ (Clytia hemisphaerica_ch_hm2_pilon)
GAAACCGAAGAAAATGAGTTTCCACAAACATTATCATTGATTGTGAAGAA
GGAAATTGTTGTTTGTGATAGAGTATCAAGTATTCCAATGGTTAAAAtcg
aatgcaatgatggaacaGAATCAAACGAAAAAGCACCAGGGTTGAAGTAT
GGAGAACAGTCTAAAACTGACGCGTTCAAGAAGTTTAAGTGTTCCAAATG
TTTTATAAGTCTTAAACGTAAAAGAGATTTAATAAAACATCGTCAAATGG
TCCACGGTAGAATTAAGCTTTTCAAATGtaaagaatgtggtaaatgtttt
ACATTGAGAGTTAAACTTAATGTACATCGAAATCGTGTCCacaatcaaaa
gaaatcatttaGGTGTCAGGAATGTGGTGAAACTTTTACACACAAAACTT
ACCTTGAGGAACACAAACGATCCTTACATGGAGCTGCAAACCATATAACT
ACCAAGAAAACTGCATTGTCCATTGAAAAGAAGATTAAACATAAACATTT
TGAATGTCAaaagtgtggtaaatcttttgctTGTAAGAGATCATTAATGA
AACATCAATTAATTCACACTGGCAGTGACTCGCCATGTATGGACAATCTT
CCTGATCATACTCACGAGAACTTAAAAGCTTTCATATGTAAGACATTTAA
ATCAAAGAAGAAGCTGAAAAAACACGTTGACAGAGTGCATAAGAAGATAA
GACCACACGTGTGCGATGAATGTGGTAAAGGTTTTACCATGCAATATGAA
GTTAAAAAACACCAGGATGCTGTTCATAAAGGAAACCGAAGAAAATGAGT
TTCCACAAACATTATCATTGATTGTGAAGAAGGAAATTGTTGTTTGTGAT
AGAGTATCAAGTATTCCAATGGTTAAAAtcgaatgcaatgatggaacaGA
ATCAAACGAAAAAGCACCAGGGTTGAAGTATGGAGAACAGTCTAAAACTG
ACGCGTTCAAGAAGTTTAAGTGTTCCAAATGTTTTATAAGTCTTAAACGT
AAAAGAGATTTAATAAAACATCGTCAAATGGTCCACGGTAGAATTAAGCT
TTTCAAATGtaaagaatgtggtaaatgttttACATTGAGAGTTAAACTTA
ATGTACATCGAAATCGTGTCCacaatcaaaagaaatcatttaGGTGTCAG
GAATGTGGTGAAACTTTTACACACAAAACTTACCTTGAGGAACACAAACG
ATCCTTACATGGAGCTGCAAACCATATAACTACCAAGAAAACTGCATTGT
CCATTGAAAAGAAGATTAAACATAAACATTTTGAATGTCAaaagtgtggt
aaatcttttgctTGTAAGAGATCATTAATGAAACATCAATTAATTCACAC
TGGCAGTGACTCGCCATGTATGGACAATCTTCCTGATCATACTCACGAGA
ACTTAAAAGCTTTCATATGTAAGACATTTAAATCAAAGAAGAAGCTGAAA
AAACACGTTGACAGAGTGCATAAGAAGATAAGACCACACGTGTGCGATGA
ATGTGGTAAAGGTTTTACCATGCAATATGAAGTTAAAAAACACCAGGATG
CTGTTCATAAAGGTATAAAGCCGTTTgaatgtcaagaatgtggtgAACGT
TTTACATATAACAAATATCTTCAAAGGCACTCGTTGAAACATAAAGGAAT
TAAACCCTTTAAATGCGACCAGTGTTCTGCGAAATTCATAACAAAGTATT
CCCTTACCTCTCATGTCAATATCGTTCACAAAAAACTGAAACCTTTCCAT
TGTACTCAGTGTAGTATGAAGTTTTCTATGAGTGCAGGATTGAAACGTCA
CATCAACGCAATACACAAGAACCTTAAACCATTCAAATGTAATACTTGTG
ATACAGATTTTTCACGCAAAGACCATCTTCAATTACACCAAGACACTGTT
CATAAAGGACTTAAAAAATATTCCTGCGATCAGTGTGGTGTTAGTTATGG
ATGCAAATCTTATCTTAAACAACATATAGACTTTGTCCATAAAAAATTAA
AGCCACTTAAATGCCATGAATGCGACTCTAAATATAGTAGAAAGAGAGAT
CTCGATGCTCATATCAATACAGTACACAAGAAGATCAAATCTTTTAAGTG
TGAAATTTGTGGAGACCGTTTCAGCCAAAGTAGTTGTCTCTACAGACACC
AACAAATTCATAAAGGGACAAAATTCTCATGCAATGTTTGTGGTAATTCC
TTTTCAAGGAAAGATAGTCTGAAGAAACACATGGAAACTTGCGAGTAGGT
ATAAAGCCGTTTgaatgtcaagaatgtggtgAACGTTTTACATATAACAA
ATATCTTCAAAGGCACTCGTTGAAACATAAAGGAATTAAACCCTTTAAAT
GCGACCAGTGTTCTGCGAAATTCATAACAAAGTATTCCCTTACCTCTCAT
GTCAATATCGTTCACAAAAAACTGAAACCTTTCCATTGTACTCAGTGTAG
TATGAAGTTTTCTATGAGTGCAGGATTGAAACGTCACATCAACGCAATAC
ACAAGAACCTTAAACCATTCAAATGTAATACTTGTGATACAGATTTTTCA
CGCAAAGACCATCTTCAATTACACCAAGACACTGTTCATAAAGGACTTAA
AAAATATTCCTGCGATCAGTGTGGTGTTAGTTATGGATGCAAATCTTATC
TTAAACAACATATAGACTTTGTCCATAAAAAATTAAAGCCACTTAAATGC
CATGAATGCGACTCTAAATATAGTAGAAAGAGAGATCTCGATGCTCATAT
CAATACAGTACACAAGAAGATCAAATCTTTTAAGTGTGAAATTTGTGGAG
ACCGTTTCAGCCAAAGTAGTTGTCTCTACAGACACCAACAAATTCATAAA
GGGACAAAATTCTCATGCAATGTTTGTGGTAATTCCTTTTCAAGGAAAGA
TAGTCTGAAGAAACACATGGAAACTTGCGAGTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000017_pilon | genome | sc0000017_pilon:84493..90773 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 784-1467:5598 |
| Aaloc | 1-780:1 |
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