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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000076_pilon:570657..575340+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_036378 ID=XLOC_036378|Name=XLOC_036378|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4684bp|location=Sequence derived from alignment at sc0000076_pilon:570657..575340+ (Clytia hemisphaerica_ch_hm2_pilon)
aaattcagGCGTATTCAATCTTCACTCGTGACGACATTGCAGACTTCAAA
GAAGTTTTCGAGTATTTTGACAAAAGGAACAGAGGTCACATCACTAGAAA
ACAAATGGTGACAACATTGAGATCACTCATCCCAAAGCCTAAAGAAAATG
ACATAACATGCCTTATGgaaaatatatcatttaaaaaTACAGTCAATTTT
CGAGAATATTTGGATATTCTTCATGCGACAATTGAAAGTAATCGCAAGAA
ACAGATACATGATAAAAAACCACGAAGAAAAAGGGTATGCTATAGAAtat
tgtttgtcttttcaatgAGGAGGAGCTGGCCCTCGGTTAAGTTGTTGcgc
ttttgttgttttgaacttttgatAATTAGCTTTTTATGGCTCGGCCGTCT
AAATCAGGGTTCTGTACTGAAAAACACCTGATAAATTTGTTCATGTATAT
ATGACATCGTCGTGTCTGTAAACTTGTCCCGGTCGTTtgccaaacttatt
caaattcttAAACCATTGAAAATAATGCGATCGTttcactaaatatttcc
tttataCCGAAGATAAATTAAAATTGCTTTAGTATTAGAATATAAATTTA
ACACTATATTATTCTTAGAGTCATTATACAAACCTAACACAAGACCAGCT
GAATGACATCCGTGACACATTCACGTTATTCGATCGTGACGGTGATGGCA
CCATATCTGTCCACGAGTTACAAgacatgatgacgtcattgggaCAACGG
GTAAGCGAGGCAGACATCAAAGAAATGTTGGAGGATACAGATACATCAGC
AGATGGTACACTCGATTACCCAGCATTCATGAGCATGATGACACGCAAAA
GTGCAAACAATGATCTGAACTGTGAAATTAAAGAGGTAAAAgttatcttt
gattttttcaagcCCATGAATTAAATCACTCGAAATTCAGTATAAATTAG
AAGCCTATTTTCAACAAGCAAACGGTTCTATCTTAGAGTGATCTTGGTTT
AATCAAGTCTCTCAGTGAGAAAATTGGTCTAGATTCTACATACACTATAA
TAAACGTACTAATTTTTTCCCATCACAGGCCTTCAAATTCTTTGATCAAG
ACGGGGATGGTAcaataacaaaagaagaattgaaaatCTGTATGAAACGT
ATTGGTGAAGACTTATCTGACGAAGATCTTAATGAAATGCTCAATGAAGC
AGATTTAGACGGGAACGGAAAAATTGAGTTTCATGGTAAGACTTATACTA
ATTATCagaatacacctatcaacccttaacAGTGCAGCCAACTTTTGACT
GTTTTTGGGTTTCCAGCATCCAAGGAAACACTTCTTGTCTCCTTCCTTGT
TGAGGGGACTGGTGATGAATTTACAAGAAAATAATGTCGAAATTCTTTGC
CTATAAGAATGTCAACGCAACCACTCGGACTTTTTGACATCAATGCTTCC
TGGAAACTCAAGCCAAGTCTCCCGCCAATTTAAAACTTGATATAAGAACT
AAACTCTTAGTACTTTTGTTTAATTTGTATAAAAGATTCTGTCAGACAAA
AGTTCTTATATCAGTGCTTTCCAAATCATAAATGCTTTAAATTCATAAAG
TTATTACCAAATAGAATGCTTATTGATAGCAGAATAAGGCTTTTACTGAA
ATTATCACacatttattttttctactACTTTAGAATTTGCAAAGCTGATC
ACATGGCCAAAATCATGATTGCTCCTTgatcttttgtatttttatcttta
tgacctttattttatgaaaatgtaaATAATTATTGACATCAACATCAATA
TATTTTGTATTAATAAAAATCTAGTTAAATGTATTCTAATGAAATAGAGT
ATTAGCTTAAGATTCAATAATGAAAAGCCTATTCACTTAGTTTTCCTCCA
ATGTACCACATTCAACTTATGTTTTGGTGTTTGACAAAGTAGCCAAAGAA
TTAACTTTTAAACTCTCAATAAAGTAGCTGGTCAAACCTGCTGGACCTTA
CAATCTGATTGTTTTCTCTTATAAAGTTTCTTTTCAAATCTTTACTTGAT
GAAGGTGAActgtcaacatttttcaaaaacttctaaTTTTTGCACTCTAA
CTGACTCTCCCTCATAGGGACAGAGATTCTTGAATATTTACTCATTATCC
ACCTAaatcatttttctatatttttaagTATAATTGATAAAGGACAATCT
GAACTGTCTCTTAATGGTAGTTGAAGAGTAATTAAATTTTATGTCTTATT
CTCTAAAGGTAAGGATAAACAGTTTGAGTCACTTGAAAGTTCTCCTTCAC
CGAGTAAAGATgtcaattaaaatcaaaaagaaaagggAATCTAACTGCCT
TTAGGCTGTACTGCCTAAATTATCAGATTTAATTCTGCCAGACAAGGATG
TATAATGAGGCAGGAACTGCTAAGAAAATTGCCGATttgcaagaaaaaaa
ttcattttattgtAAGGTAGTCTGACTTAGCTGTGTTTACCTCATATATA
GTgcatttaataaaatttcaagaattacaACGTTGACACAAAGGGATTTC
ccagccaaattttaaaaattgctagTAGTTTTTAAGTGCCTTAACTTAAG
GAAGTAgggttttaactctgagttttagcATAAGGCTTAAGACTTGAGGA
tccaaaaagcttgtgaatggTCTAACTAGGTTGAAAATATAACCTGGAAG
CCATCACACCCCTCCCAAAATATATGATTAAATAAAGTAGAAAGCCTGAA
AATATCACTCTTTCCTGAGCTTTAAATTCTGTTAAATCTAAAACCTGAAG
CTTGTGCAAACCAGTGGAAACCAATGAAAAACTAGTAGAAACGGGTAGAA
ACTTGTAGAAAACTAGTGGAATCCAGTGGTCAAAAGCAAACCGCGAGCAG
CTGTCATCTCATTCTCCATCTAGCACAAACACAGAAATTGGCTGGAGTAA
TTTAATATGCAGACCTGAGTCAATAGCAATTTATCAACTGATTTGAGAAA
GATCACAAAAGAGGATCTCTTCAGAACTAAACTTattgaacattttaaga
aaaattaactATTTTCTAGTAATACTTCTAGTAAAAAGTTTTCACtatat
ttatttactatttataatcataatttaacattttattgtattcaagatat
ttaaaatttcattcgTTATTATCATAAGTTCAATCTCGATTTTGGCACTA
ATCTCAATCTAAGATTGTCAGTCTGAAAACCACAATTTTTGTCAGAATTC
CAAACTTTTACATATACCTTAAATTCTCAACTCCCTCTCAggctttcttt
tatttgtttttatagtTCAACGTGTAATAAAGGTTTTTACAGGACTATCA
TTGTATTTTTATATGTAGCAAGAATGGGCCTTCCGGCCTGATGTTATTTA
AATATTTAGATAGATAGACAGATAGACAATAGGTCGTCAcgttctcccaa
acgactaGCTATATATTCAACATGCAGCCTAGAGAAATGTTAAAATTCGT
TTTCCCGCAAATTCCTCATATTATGTCTCAATACCCTCATTCTTTTGGAA
CTTATCcttagaggcaatcgagcaagaacaatagaaaaacctTTATTTGG
Ctatgtagaaaaattgcaaaatagaaactcgattaaattcacaatactga
ttctttaccctaaaacgaaacttttctatctTGTAAATCTTTGttacact
tccccatacgtaaaatatagagtacttttGTTTcccccccccAAACTTGC
GATGGAAAAATGTTAAGAGTTAAGACCGCGTGTTGTCCTCGCGGACTTtc
ccagcgtaatttatttgtgtgatgtcataatgttattgttctcatctcag
attattactgactGTTTACGtgattggacaatggttgacatTAGATCGTG
ACGTATACAACAATTCAATGACGCgcgaatgaaagttcattttgggtggc
ttgataacactcgtaatttcttcattttcctaatgtattttgtttttttg
ttttagaagaAGGACTATATggtagaaaataaggttttatactattattt
ttaaatttgatattttaaatgcctattttaaagaaaaattcgtaagtggg
cggaaaaataaaaacgcttttgttttgaacgcccgaCTGCCAAAATCTTg
ggattctgggacttcttttgagacgggggttagacatgaaaacaaagaac
taagtagaatcgtcttttttaaactttaaatacaatgtaaagtatttttg
taatcaaaaattatatttaacaaatatattgaaaagtaataattcgttat
aagcaaagaaatcttgtgcggaaaagaaagtcttcatttATTTTGACCCC
TGGATTTTTCATTGCATATAATTTCtatgggaaatcgaaagtaatttcat
ttgacttgtgatgtttgagagcttggatgttgggaagctgcaagaataaa
ggtaaacaaattatagtcttttttctgaaagaagaatTAACTTTTTGCTA
GACTGACATGACATCCTCCTTCCTGATCCTCTACATCAGCCCAAAAATAT
TCctagaataaaagaaaaactcatTCCATTCTTAATTAAATggtttaaat
aataataaaaacataCTAATAACTGCTCCTACCTGCCCTGTGCCTGTGGG
TATCCTGTTTACCTTCGTACCTAGATTAGATAAA Coding sequence (CDS) from alignment at sc0000076_pilon:570657..575340+ >XLOC_036378 ID=XLOC_036378|Name=XLOC_036378|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=762bp|location=Sequence derived from alignment at sc0000076_pilon:570657..575340+ (Clytia hemisphaerica_ch_hm2_pilon)
aaattcagGCGTATTCAATCTTCACTCGTGACGACATTGCAGACTTCAAA
GAAGTTTTCGAGTATTTTGACAAAAGGAACAGAGaaattcagGCGTATTC
AATCTTCACTCGTGACGACATTGCAGACTTCAAAGAAGTTTTCGAGTATT
TTGACAAAAGGAACAGAGTATACAAACCTAACACAAGACCAGCTGAATGA
CATCCGTGACACATTCACGTTATTCGATCGTGACGGTGATGGCACCATAT
CTGTCCACGAGTTACAAgacatgatgacgtcattgggaCAACGGGTAAGC
GAGGCAGACATCAAAGAAATGTTGGAGGATACAGATACATCAGCAGATGG
TACACTCGATTACCCAGCATTCATGAGCATGATGACACGCAAAAGTGCAA
ACAATGATCTGAACTTATACAAACCTAACACAAGACCAGCTGAATGACAT
CCGTGACACATTCACGTTATTCGATCGTGACGGTGATGGCACCATATCTG
TCCACGAGTTACAAgacatgatgacgtcattgggaCAACGGGTAAGCGAG
GCAGACATCAAAGAAATGTTGGAGGATACAGATACATCAGCAGATGGTAC
ACTCGATTACCCAGCATTCATGAGCATGATGACACGCAAAAGTGCAAACA
ATGATCTGAACTGCCCTGTGCCTGTGGGTATCCTGTTTACCTTCGTACCT
AGATTAGATAAAGCCCTGTGCCTGTGGGTATCCTGTTTACCTTCGTACCT
AGATTAGATAAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000076_pilon | genome | sc0000076_pilon:570657..575340 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 334-381:4637 |
| Aaloc | 85-330:625 |
| Aaloc | 1-84:1 |
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