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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000076_pilon:521522..526175- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_036375 ID=XLOC_036375|Name=XLOC_036375|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4654bp|location=Sequence derived from alignment at sc0000076_pilon:521522..526175- (Clytia hemisphaerica_ch_hm2_pilon)
CTTATCAACAGCAAGTTTGTAAGTTCAAAAGATTTTACTGTTCAATTTTA
TTTTAAATCGTTATTTTGAGTTTAAGATATTGACTAAGTCCCATGTGTAC
TTTTTATCAAATCAGCCAAGCTATTGGTTGTTTACCAGGGTAGGCCATTT
TGGGAAAGATTTATGGGAAAAGCTGCATTTGCAAAAAATAAATTAATCAA
CCCTCTCAAAAGAATATTTTATAGAAACGATTTGATTTTCGAAACATTTA
TATTTCATTTAGCTACAATTTGAGGAAGATGCGATGGAATTTGTTGGAAC
ATTGAAAGGAGCCAAGGGAGAGCAAGGCATTATGGGATTGAAAGGCGAGG
AAGGAAAACAAGGACCTCAAGGAGAACAGGTAAGTTATATAGAATCTCTG
TTTAGTTTGTCTATTATCATTTTTATCAAGAGTTCGCGAATAGAGCCTTT
GGTTTGGGTTATAACCACTATAGCCAACTTAGTGAGGTTAACTCTCGCCC
AAGTGAAGGTCCGGCAACATTATCACTTTAGAAGTTCAAGAAAGTATTTC
TCAAAAAGTTAAAATCGCCCATGGGTGTTTTGGTCGATGCAGGCTACTTT
AGATACTTACCACCTACCTGAATCGTTGGGTTTTTCCTTCAATATGTGGA
TATATATATATTTCTTCATTTTCTTCAGGGAATACAAGGTATCCAAGGGG
AAAAAGGTGAAAGAGGTGCTAGAGGAGAAAAGGTAGAGAAATATATCTTA
CTCGTTTATGACAAAGGAGGATTTGCTTTCAAGCAATTTAAAATCACTAA
TCTTAATACCACGCATGCAGCTGTCTAGAAGAAGCCATTTCACACGCGAT
TTCAATTAATATTTAAGGCCTACATAATAATTTGGGCCTTATCTAAAACA
CTATAATTGTCTTAAAACAAACATCATTTTTCACGTTATTGATTAGCAAA
CTCCATTTCCTGATTAGGGTGAACAAGGAATCGGTGAAGTTGGACCAAAA
GGTGAAAAAGGGGACAGTCTGAAAATATCAGAAGTTGCTCAAGAGGTTAT
TGGTTTGGCAGAAAGACGTAAGTTTATTTTTCTCCAATACTTAGAGGGGT
TCTGATAAATTCCGATGGTGGATTGGCGGATTGGCGGCCGCCCACGCTAA
AGCTCTAAAAGGAGCGGGCCAATTTCCCATCGGAGAGGAATGATAGTCGG
CCTTTGATGTACTGCATTCCCAGTCAGGTTCAGCCACCCTTGTGCGTAAG
GCTGAAAATATTTAGGTTAGACCCGTTAATCCCCGAAAACATCGGCTGGG
GTCGAAGACTCCCGCTGCAAAATCCCTGACGCAGTCTTGCAAAATTCCGT
AATCCAAACCTTCCACATATTGAAAATTTCCCGACCTTCAGAGTTTTAGC
GAGTGCAGATTCCCAGCTAGCACACAACGTTATTTCAATGTTTTTCCGTA
TAACGTTAGACGGATGTTGAGACAACGTTGCGTGCCTGCAGGTTTTCCCT
TCCCACTACCTTCCTCCTGAACAGATTAACTTACTAGCTTGTAATTGAGG
TTTTTGTATTTATCACAGAAATTCGAAAATTGAAGGGCGATCAAGGACCT
CCAGGTGATCAAGGGCCACGTGGTCTTCCTGGTGTTTGAGGGCCGCGAGG
ACCCAAAGGAGAAGCTGGAGTTTCTACAGGAAGTAAAGTAAGTAGAAATA
TGTCATCAAAAATATACTTTCTAAATAAAATATTCGCTTCCCGTTGTATT
GAAAACTATTTTCAAAATTGCTCCCGATAACGTCGTTATAATTTGTAAAT
GGCTATTAGAGCTTTTTATCCGATAAGCGATGTCGGATATATCCTCTTAA
TCGATGCATCTAGGTAGACAGAACGATACCCAAATTCGTTAAAACGCTGA
TTTCAGAAGCACTATCAAAGTTTTTCCCAACTCCTATTCTTTTTAATATA
ATTACAATGACAAATTGTTGTTTTCTGTAGGCGAATGTGATATTAACGGA
TCAAGATTTGGATATAATGGAAGATATGTTCGGCGTTGGTTCTCTTGCAT
TTGTTATCAGTACAAATAATTTGTTCATCAAATCTCTCAAAGGTTGGATC
AGCATCCCCGTAAGTTCTTTGGTTTTGATTGAGATATATTCATTCTCACC
AGTTTTTTGTGAGACTTATCTCATTTATTTTATCCCAAGTCTGCCCTTTA
GATTCTTATACACTTTATACAAGCTTGAATATTTCCATAATACCTGTGAG
CCATGTAAGCCATGCATTTTTTGAGATCTAAACCCTCAAATATCTTTTTC
AACCTTAAGTAAATGTAAAACTTAAAACTTTACTTGTAATTTTATCCCAT
TTCTATCACCATAGACCGAATCGAAATCAGGTCTTCTTGGCAAACTGACC
ACGGATAGCAACGAGATTGCATCAGGTCCAACCGTGATCGAATTGACCAA
GAAACAAATCACCGAACCCACTGATGTTGTAAGTGGTGGCTCTTCTTTCC
TTGGCAATTTCTTTTGCTACTTTTATTCGTATTGAGTCACGACAGTAGAA
ATCAATCAATCAATTGTAAACATGATTCAAAGAAATCGATTTTTTAATTA
AAGTTTTGCCACATAAAATACTAAGGAGGCCCTAAACTAAAAATTGCATC
GTAGACCAAATTCATAGAAATTTCGAATAAAGTTTCTCCAATTGGACTAT
AGAGTTTCACTGGATTGTAAATTTTCGTCTTGTATCATCATAGGATAAGA
AGTTGATCAAAGAAACCTTGATTGTTCCACAGCCTGGGATAATGGCAAAA
AGACCTTACGTAAGTTAACTTTTGCAAAAAAATTTCTTTTTTTGAATATC
AAAACATATCACTACAGGCGGCTTGTATTGTCCTTGTCGTTGATTGATGT
TTGACCCTGCCTTCCTTTCGAACTATCTTTTCGATAGAAATTTCCAATCT
TTCCACTTGCATCAACCACTGTTAAACCCACGCATCTAAATTAAAAATTA
CTTTAAAAATCTTCCCTTTTCAGTTGATGTTAATCGCTTTGAACGAGCCT
TATTCTGGACGAATGGGAGGTTTAGCAAAGATTGATAAAATGTGTTCAAC
ACAAGCCAAAGCAGCTGGATATTTCGGATTGAAATTCCACACCTTGATCT
CAGATAATTATAATGATATCGCAAATATGATTCCATTCCGAAGTCGTAAA
AAACCAGTCGCTAATACCAGGGTATGTACCAATGAATAAATGATAATAGT
TCCACATATAGATTTATTATCTTCTTGATTATCATGTGGAAGCACTATAT
CAGGCAGGGATAACTTCAAATTAGCCTATCATCTCGGAATATCAGCTAAT
TAGCCTAGAATAAGCAAATTAGCCTATTTCATATAGGCTAATTAGCTCAT
AATGAAGAAAAATTTGATTTTTGAGCCAAATACTAATAGTCGCATCTTTT
TTTCATTAAAAACAAATCTTATATGTTTCAAAGAATCTTCTCCACTTAAA
AATCTTTTGTGTTCAGCTCCCAGAAAAGATGTATTTTAAAAAAGCTAGTT
GATGGGCTAAATAACTAATAATAGGCTAATTTTCTGATCTTAGTACCGTG
TGCAAAAAAAAATATAATATTTTCCGCGAAAAATGTCGAAGTTTTTATAC
TGCGCATGCCCGCGCATGCGCAGTTAGAAAAAATTAAATATCTCCTATTC
TGGAGCTGATTAAGGGATAATATTTGGAATATACATTAATTGAGTGATTA
GAGATTAATCTGAGAATTTATAGAATGCGACTATTAGTATTTGGCTCAAA
AATCAAATTTTTCTTCATTATGAGCTAATTAGCCTATATGAAATGGGCTA
ATTTGCTTATTCTAGGCTAATTAGCTGACATTCCGAGATGATAGGCTAAT
TTGAAGTTATCCCTGCCTGTATATGTAATATACACTCTTCTTTAGAATAC
TTTCGCTCTCTGTAATCAGTCAATCTCTTTCAGATGAGATCTTATTATGC
ACTTTAGTTTTTTTCTTTCATTGTTGTCCATTCTTGCTTTAAACTTCCAA
TTTCAATTGAATATTTACCTGGCTAGGAAACCGACTTTCAGACCAGGGAG
ATATTCAAATTATTTGAAGTTTAAAAGGAAATTTATGAAGTCTTTTTACT
TATTATCTTACAGGGTGAGCAGATTTTCGCACGCGCGGAAGATATCTACA
AGAGTGATAATTACACTGCATTTAATCCAAACATCCCAATCTATTCTTTC
GACCAAAAAGATGTTCGCCAAGATCCTTCATGGTAAGATTCTGATGCTGT
TTCTCTTTTGTGAAAAATATAGTAAATAGTTTCTAATGAATGAAAGCTCC
AAAAAAAGAAAACAATTTAAAAATCATAGAAACACGAACATCATTAAAAT
CAACGAATTCGAAATGCACCACTGTATCACACTTCTATTTTAACTTATTT
TTTAGGCCGGTGAAGAAATTTTGGCACGGTTCACACGCTAACGGAAAACT
CCACTCAACGAAAATGAATTGCCGCAACTGGCGTTCTGAGCAACCTTTCC
ATAAGGCCACCGCATCTTCCATTCTTACCTACACTCCTGCATTGAATGAG
TTAGATGTTCGCTGCGACCAAAAACTCATCGTCTTGTGCTTACAAGTAAG
ATGA Coding sequence (CDS) from alignment at sc0000076_pilon:521522..526175- >XLOC_036375 ID=XLOC_036375|Name=XLOC_036375|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2466bp|location=Sequence derived from alignment at sc0000076_pilon:521522..526175- (Clytia hemisphaerica_ch_hm2_pilon)
CTTATCAACAGCAAGTTTCTTATCAACAGCAAGTTTCTACAATTTGAGGA
AGATGCGATGGAATTTGTTGGAACATTGAAAGGAGCCAAGGGAGAGCAAG
GCATTATGGGATTGAAAGGCGAGGAAGGAAAACAAGGACCTCAAGGAGAA
CAGCTACAATTTGAGGAAGATGCGATGGAATTTGTTGGAACATTGAAAGG
AGCCAAGGGAGAGCAAGGCATTATGGGATTGAAAGGCGAGGAAGGAAAAC
AAGGACCTCAAGGAGAACAGGGAATACAAGGTATCCAAGGGGAAAAAGGT
GAAAGAGGTGCTAGAGGAGAAAAGGGAATACAAGGTATCCAAGGGGAAAA
AGGTGAAAGAGGTGCTAGAGGAGAAAAGGGTGAACAAGGAATCGGTGAAG
TTGGACCAAAAGGTGAAAAAGGGGACAGTCTGAAAATATCAGAAGTTGCT
CAAGAGGTTATTGGTTTGGCAGAAAGACGGTGAACAAGGAATCGGTGAAG
TTGGACCAAAAGGTGAAAAAGGGGACAGTCTGAAAATATCAGAAGTTGCT
CAAGAGGTTATTGGTTTGGCAGAAAGACAAATTCGAAAATTGAAGGGCGA
TCAAGGACCTCCAGGTGATCAAGGGCCACGTGGTCTTCCTGGTGTTTGAG
GGCCGCGAGGACCCAAAGGAGAAGCTGGAGTTTCTACAGGAAGTAAAAAA
TTCGAAAATTGAAGGGCGATCAAGGACCTCCAGGTGATCAAGGGCCACGT
GGTCTTCCTGGTGTTTGAGGGCCGCGAGGACCCAAAGGAGAAGCTGGAGT
TTCTACAGGAAGTAAAGCGAATGTGATATTAACGGATCAAGATTTGGATA
TAATGGAAGATATGTTCGGCGTTGGTTCTCTTGCATTTGTTATCAGTACA
AATAATTTGTTCATCAAATCTCTCAAAGGTTGGATCAGCATCCCCGCGAA
TGTGATATTAACGGATCAAGATTTGGATATAATGGAAGATATGTTCGGCG
TTGGTTCTCTTGCATTTGTTATCAGTACAAATAATTTGTTCATCAAATCT
CTCAAAGGTTGGATCAGCATCCCCACCGAATCGAAATCAGGTCTTCTTGG
CAAACTGACCACGGATAGCAACGAGATTGCATCAGGTCCAACCGTGATCG
AATTGACCAAGAAACAAATCACCGAACCCACTGATGTTACCGAATCGAAA
TCAGGTCTTCTTGGCAAACTGACCACGGATAGCAACGAGATTGCATCAGG
TCCAACCGTGATCGAATTGACCAAGAAACAAATCACCGAACCCACTGATG
TTGATAAGAAGTTGATCAAAGAAACCTTGATTGTTCCACAGCCTGGGATA
ATGGCAAAAAGACCTTACGATAAGAAGTTGATCAAAGAAACCTTGATTGT
TCCACAGCCTGGGATAATGGCAAAAAGACCTTACTTGATGTTAATCGCTT
TGAACGAGCCTTATTCTGGACGAATGGGAGGTTTAGCAAAGATTGATAAA
ATGTGTTCAACACAAGCCAAAGCAGCTGGATATTTCGGATTGAAATTCCA
CACCTTGATCTCAGATAATTATAATGATATCGCAAATATGATTCCATTCC
GAAGTCGTAAAAAACCAGTCGCTAATACCAGGTTGATGTTAATCGCTTTG
AACGAGCCTTATTCTGGACGAATGGGAGGTTTAGCAAAGATTGATAAAAT
GTGTTCAACACAAGCCAAAGCAGCTGGATATTTCGGATTGAAATTCCACA
CCTTGATCTCAGATAATTATAATGATATCGCAAATATGATTCCATTCCGA
AGTCGTAAAAAACCAGTCGCTAATACCAGGGGTGAGCAGATTTTCGCACG
CGCGGAAGATATCTACAAGAGTGATAATTACACTGCATTTAATCCAAACA
TCCCAATCTATTCTTTCGACCAAAAAGATGTTCGCCAAGATCCTTCATGG
GTGAGCAGATTTTCGCACGCGCGGAAGATATCTACAAGAGTGATAATTAC
ACTGCATTTAATCCAAACATCCCAATCTATTCTTTCGACCAAAAAGATGT
TCGCCAAGATCCTTCATGGCCGGTGAAGAAATTTTGGCACGGTTCACACG
CTAACGGAAAACTCCACTCAACGAAAATGAATTGCCGCAACTGGCGTTCT
GAGCAACCTTTCCATAAGGCCACCGCATCTTCCATTCTTACCTACACTCC
TGCATTGAATGAGTTAGATGTTCGCTGCGACCAAAAACTCATCGTCTTGT
GCTTACAAGTAAGATGAGCCGGTGAAGAAATTTTGGCACGGTTCACACGC
TAACGGAAAACTCCACTCAACGAAAATGAATTGCCGCAACTGGCGTTCTG
AGCAACCTTTCCATAAGGCCACCGCATCTTCCATTCTTACCTACACTCCT
GCATTGAATGAGTTAGATGTTCGCTGCGACCAAAAACTCATCGTCTTGTG
CTTACAAGTAAGATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000076_pilon | genome | sc0000076_pilon:521522..526175 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1036-1233:199 |
| Aaloc | 916-1032:492 |
| Aaloc | 718-915:1632 |
| Aaloc | 652-717:1912 |
| Aaloc | 538-651:2291 |
| Aaloc | 409-537:2675 |
| Aaloc | 292-408:3085 |
| Aaloc | 190-288:3688 |
| Aaloc | 136-189:3977 |
| Aaloc | 19-135:4393 |
| Aaloc | 1-18:4655 |
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