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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000076_pilon:428047..434658- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_036371 ID=XLOC_036371|Name=XLOC_036371|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6612bp|location=Sequence derived from alignment at sc0000076_pilon:428047..434658- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGTAGAAATACAATTGTTGAATATTACGGGGAAAGACCATTTCAAAA
GTGTGGATATTGCAAAGGCAGAAAATGCAAGATTAATCATGGTACCCCTT
ATTTTTTTCATTTTTATTTTTTATTCTTCATTTGGTAGACTAAAAAGAAT
TCAAAATTCCTATGATCCTCTCATAAACCTGTCAAGCATGTTTTGTTTGT
GGCTATGTGATTAAATCTTTAAACATTAAAACCAAGAAATGTCTCATTTC
AACAGTTAAACCTACGTCATTTTTAAAACAAATATTCATTTCAAATTCTA
TCAAAAGATCAACCGTTTTGAAAATAGTAAATAATTAATCTTAACAAATC
TGAATGGGTAAAAAATTCAATTTTTAATTTTATCATTAATATTTACAACC
TTTATTGAATCAGGGAACAAGGTTTCCTTTTTTGCAAAAAGATGATGAAA
TTTTATGGACAGTTTTTATCATACTGGGCTTGACACTCAAACCAGTATGG
TTGTCCCTTCCCTCCCATCCTATAAACCCTTTCCCTTCTCTCAGTTCAAA
TCAAAACAAAACAAAACAAAATCCGAACATTCTCAATACTAAGTAAGAGA
GTTACTGGACATGAATAAACATTCCATAGTTGAGTTCTTTGGTCGTGAAG
AGACTGGTCACCGGTGTGGATATTGTAAATCAAAAGAAAGTAGCATTGCA
GATGGTAAGTCTTCTAGAGATTAAGTAGAATTGTCGCCTGAAAACATGGT
CTTAAACTAATGGATTTTTTTGTACTAAAATTACCTCATATATCGCATAG
GATCTTACTTTCGTTTATAAAGCTTTTACTTATTCATCCCAAAAACTAAG
GGGTTTTATGAGGAGGAACCAACAACTGTATTTCCAGTGCATTGAATACT
CAACACCTGATATGATTTTATTTCTTACTTCAGGAATGTGGGCACACTAT
TTGACATGTCAAGATTACCAAGATCTTTTAGACAGGGGATGGAGAAGGTA
TGTATGTGTTTTGTCTCTTCTTTACTTAAATTTTAAGGACGACGATTTAT
TACATATACCTAAATGAATCAAAATTCAGAAATATTCAGCATATATTGTC
TCCAATGTTTTACGTAAATAATACAGTTGATGCTCTCTAATTCGATCTTT
AAGTGGAATTTGATTTTCATCGAATAAGGGAGCTTATCGAATAAGGGAGC
ATGGTTTATGGGAGTTTATTGTTGACGGTGACTTTCAATACTATCACATG
ATGGAACGTATGGAATAGTAAAACCTCGAATTAGAGAGCGTCAACTGTAT
TATCCAACTCATGTAAAAATGGAGGTTTTTAATTTTTTTTTTACTTTAGG
AGTGGGAAATATTGTTACAAGCCAATCATGGATAGAACATGTTGTCCCCA
GTACACAATCAGGTGAGTTTATCAAGTTTGTATACTAACTATTTAGATCT
TTGCAAGAGGTCAGATGTGATTTTCTTATGATAAATACTAATGGCTAAAG
GTATTTCACACCCTTAATGCTTTCGAAGCTTGTTAAAGTTAGAATATTAA
CTAATTTAGTGAGCTTCATTTGATATGATTATTTAATTTTCATTTTTTTA
AGACTTGATGTCACCAACGCCAAATTACGGAAATCTCAAAAGAAAGTCAT
CAAAAACTTCAACAAATACTTAACCACTGGTATTCGTCCAAAGCAACCAT
CCAAAACAGATCAAAAAGCTTCTGGGGGAGGAGAAGTAGACGAGGATAAC
AATTGTATAGATGAACCTTGTGGTGGAGCAAGAGAAGTAAAAGCCCCTAA
GATGGATATCAGTTTTACTGGTGGCATTGTGAATGGTTCGTTTCTTTTCT
TTTTGGGCTCTTCCTTATAAGATGAGATTATGAAAAAACACAATGAAATT
GACATCCTTAAATAAGATAGTAAAACGTTCGAAAATGTCATAAAAAGAGA
GCAAGACTGAATGAAATACGGCTTTTCTGGCTTTTCTGCTAATCGGTGAA
CGATAAACCATATATTCAACGTGAAAAATTGGATATCGAAAATAATTATT
CAGTCTCGCTTATTCAACTCAGCTTCGCTTCGTCGAATATCCATCAAGCT
CGACTGAATAATTATTTTCGATATCCAATTTTTCTTGTCGAATATCTGCT
TAATATAATTATTTAAATAATACATTTTTTTGGATTCTGATGGTATAAAG
ATCCTCCTAATAATACTTATTTTTTTCTCGAGGTGCTGACCCAAGTAAAC
CAAAATGTCGGAAAGCTAAAGAAGTGAGAAAAGAACGGAAACAGATGAAA
CAAAAGGTTAATACAGTAAACAGACTATTCAAAAGATTTCCATATCATTA
AAGCACCGAAACTCTTATATTTCTGATGCAGATAGTCAGCTGGTTCAGGG
TTTTTGATTTGATTCTGCTATGAAGCAGAAGCCCCCTTAAATGAGATTCA
ATAACAGGTTAATCACCCAAACAGGTTACAGACTTTGAATTCCTTTCAGC
TCTCTGTCTTCATTTTTTAGCCACACGAACAAATAACAAGTAAACAAAAC
AAGAACAAAGAAAAAACATACGAAGAATGGATAGACGGTGTACCCGAAGA
TGCTAAAATAAAGTTTGAGGTATAAACTCGATGCGGTAAAAGACTGATTT
TAGTTCGCCCACCCTCACTTTAGGGCATCAAGAAGAATTTCAAGGGGTTT
TTTTCACAAATTTTACGATTTTCCAAGGTATCTTTGACACAATGTCAAGA
ATATTTTTGCCTTGAAAATAGTTGACCACCCCCTGTATGGATATTAAAAA
AGACAGGCTAGTTATTCAACCATTTAAAATATTTTATTATAGTTAGACAA
AAATACTTGGCAATTTTACTCAAAACCACAGAGGGTTTCTTCAGGCAAAA
AATCTCAAACCATCTTTAATATGAATAACAAATGCTATGTTTTCTCAGCT
CTTCGTCTGAAGCATTAGGTATCTAGAATTTTCATTTTTTTTGTTATTCT
GGGAACAGCTATAAAGGCGTTGAAAAAGACCAAGAAAGGCTCTTTTTTAT
TATAAGGTTTTTATCATAGTTCAAAAGAAATGTTTTAAAGATATTTTGCC
TTGCTTTTAGGTGAAATTAGTTCGTTGCTGTCCAGAAGATGAAGATTTTA
AACAGACTTTTCGTCAAGAGTTGGAAGTCTATCAGAAATATCAAATTGAA
ATACATAAAGATGACCCTGACGAGGTCGATGAAAGACAGGTTGATTTTTC
AATTTAATTCTTCAAATTCTTCAAATTCTTCAAATAGGAGCAAACCCCCA
TGAACAAAGACACGCGTTGCTAGTCCTTTGCTATCACTCAAAAACTGCTT
ACACTACACAATATATCGGTGAATAATATTCGACAATATATATTTTCGGA
CCGTAATGTACGGAGTAAACAACTCTATTATAAAAAAGAAATTTCAATTC
TGTAACAGTTCCCATATATTGTTGGAATATTGCAAATCGAGCTTGCAAAA
TATTGTGAACACCTTTTCAATATATTTTGAACACTTTACAATATATGGCC
GGCACTCGCTGTGTAGTGTATTTTAGGATTCTTACTACCGTTCGAAAATA
AAGACACCTGATTGTATTGAACTTTTATTTCACCTTTAGGGTATAAATAC
CTTCCGCATGCAATATGATACGCTATTTATGTCATTCGTAAATTCAATTA
TATTGATTTGACAAATATGAATTATAATGATTAATTAATGATTAATTAAT
TATATTTTTTGGTGTGTAATATCTTGCTTTCTTTTTCTTTTATAGTTTCG
GAGATTTTTATGTGAAGGTCCACTCGTGGTGAGTTCTATGTTTGTATGTA
CCCACCTAATAGTAAACTGCATTGATTTCTATCAGAATCATGCATGAGTG
ACTTGGTCTCGTGCAGTCTTTCATGTAGTGATCTTCTTTTCACTTTTCAA
CACATTTAGATTCGAATTAAGTCAAATTGCTCTTACAAACGTGAATTTGT
CTTTACAGTTTTTTTACATAAGTCTGAGAATGTGAACTAAAGACCCTTGA
TTGCAATTGATTGTATTCATGATATGCATCATTACAATGTCTTCTGACAT
TACATCATTGACCCAATAGCTAATTGACAGTTGTAAGTGACTTAAAACCA
GGCAATACGTCACTTTCAACCAATCAGCTGTTGGGTTCGTGGAAGACATT
GTAATGGTGCATATCATGAATTGAATATTTACCTTTTTTTATCAAAAGCC
AGTATACGGGGACGATGATGAAGATGAAGACTTGGACATCAATGGAATCC
CTTCTTGTGGTTTAGGTGCTTTCCATCAACAATATTACCTCGATGGTATG
AAATAGCTTTCCTTTTAGATCCAATAACATGTCTCGTTCGATACGCCATT
TTGTTTCTTTCACTTGCTACAATAGTCTTTTCCATGAAAAAATTGAATAT
GGGGGGTGAAGGATATATTGGATATTTTGTCCGGGGGTAGTGAAAATCTG
CAAAATTTGCTTTTCCTCTGGTACAATTGTTACATTAGAGAGTTTATATC
TGATTAAATAATGGACGTGCTCCTACTGAACTGACTTTGCTTATAGAAGT
GTCGGCGAAGTTTTGTTGTTTTTTTTAGGATGAGACGAGGATAGATATTT
TAACTCGAACTCTTATACTCGTTACTGGCTCCTAATATATCCTCAAATCA
ATTTTTAGTTAAAAAACTACCGATTCAAAAAGTTATTCAAAATAATATTC
ATATTTCAGGTCGATTAGTTGCGGTTGGTGTTCTAGACATTTTACCGAAC
ATTGTTTCTTCGAAATATTTGTTTTACGATCCTGAATATCAATTCCTTTC
TTTGGGAACTTACTCTGCATTAAGGTAATTGATTATCGCTAGTACCTCTT
TTTTTTTTATAGTTTTCCCACCCCAATTATTGCGTATTTAAATACATTGC
AATACACACTCTTGTGCACACTGTGCAAACTAATTTTGCGAATGTCAAGC
ATTGAAAAATCAGTCACGCCCTTTTCATGTTTAAGTGAAGTTATCAACCA
ACATCCAACCAGCACACTCACAAGCTTTGATTTTTTTGTGGTTATATCAA
TTAATTGTAACTTCTGTCTGTACCTGTGACTCCTTATTTGTTTATTTCCA
GGGAGATATATTTTATCCGTTCGTTGTATCGAGAAAGTTTATCCATCAAA
TACTACTACATGGGTTTCTACATTCATTCTTGTCTAAAAATGAAATATAA
GGTATGGGAGTTTTTTTATTTTCGTTGGGTTTATTCCTTCTTTCATTTAA
TTCTGAAATCCCGGGCGTGGCACTCGGGGCACACGGCATGTGCCGCCAAA
ATAATGGCTTTCAAAATCGGACCCTTACAGTGCAGCCCTTTAGCAGTGAA
AAGGTGCCCTCACAGTACATTTTACCGAACATTTCTGACCCTTACAGTGT
AGCTTGACTTCATATCTTATTTTGCTGAAGCCATTCGAAAATGAACCTGA
GATGTCGACACAATGTTGAAAACAAATTATAATAGGTGCGAGTCAAAACT
ATAAAGATACAACAGATTTTTACTGTCAGGCTTGCAATTCAGCAGTTCCA
AAACACACCCTTACAGTGTTTTCAGATAATAGATGACCCTTGTAGTGCAA
TTCATCAAAAGTACACCCTTACAGTGTATTTCGAGGGTCTCGTAAAACCT
ACCCTTAAAGACGGCATATGCCGTGGGTCGGACTATATGAGTGCCCCCTC
CCCCGGGTCTGAAATATTCTTTAATGGTAAGGCTTAATTTTTACCGTGTC
ATGTGGCCTATGAGTGGATTTTGGATGTTCTTTTTGTTTTTCAGGGTAGC
TTTTTCCCGTCGTATTTATTATGTCCCGAAACATACATGTGGAAAAGTAT
AGAAGACTGCTTCGAAAAGTTAGATGCAAGTAAATACGCTAGATTGGAAG
AAGATAAAAATAAAGGTAAAGTTTTATTGGTATCTTAATGGAAAACATCA
GCATCGAATGTCTTTGAAATCCATCATTCTTTTGAAGTGGAGTGTATTTT
CTTGTTCTTCGCCTTGCATTCGAAGGCTAACCCCACATCCCTCGATTGGT
GATTCATACTTGAATTATAGGGAGTTTTCTTTGGTAGGCTCTAAACAAGG
CACTCAACGTTAATTGTACTGAAGTGAACGAAATAATATTTTTATATGAA
CTTTTTCTCACTTAGTTGCGGAACAAGTCAATGCATCTGATTCGCTAATT
TTGCACAAAGGACGTGCCATGCCATTTCAGGTAAAGTATACTTTTTCAAC
TGAAATTATAAGAAAATGTGTGTTTCATTTCATAGTTGGCTCTCTACATT
CGATCTTCAAGAGACCAATTTTCATCGAATTAAAGAAGGATTTTCGAGAT
TGAGATTTGAATTAAAAAAGATTGGCTTCCTCAATTTATTTAAAGCCGTT
TTACACAGAATTTTATCTTAATTCTATCGAATTTATTGCTTTTAGGTCTT
CATATCATTAGTGAGTAGTGAATCTGAAATATCTGACCACAAAAACACTG
TTGAAGAATATACTACTTTAGTTGGAGAAGCTTGTAAATCCATACTGTTG
TTTCGAAGCTGA Coding sequence (CDS) from alignment at sc0000076_pilon:428047..434658- >XLOC_036371 ID=XLOC_036371|Name=XLOC_036371|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2970bp|location=Sequence derived from alignment at sc0000076_pilon:428047..434658- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGTAGAAATACAATTGTTGAATATTACGGGGAAAGACCATTTCAAAA
GTGTGGATATTGCAAAGGCAGAAAATGCAAGATTAATCATGATGGGTAGA
AATACAATTGTTGAATATTACGGGGAAAGACCATTTCAAAAGTGTGGATA
TTGCAAAGGCAGAAAATGCAAGATTAATCATGTTGAGTTCTTTGGTCGTG
AAGAGACTGGTCACCGGTGTGGATATTGTAAATCAAAAGAAAGTAGCATT
GCAGATGTTGAGTTCTTTGGTCGTGAAGAGACTGGTCACCGGTGTGGATA
TTGTAAATCAAAAGAAAGTAGCATTGCAGATGGAATGTGGGCACACTATT
TGACATGTCAAGATTACCAAGATCTTTTAGACAGGGGATGGAGAAGGAAT
GTGGGCACACTATTTGACATGTCAAGATTACCAAGATCTTTTAGACAGGG
GATGGAGAAGGAGTGGGAAATATTGTTACAAGCCAATCATGGATAGAACA
TGTTGTCCCCAGTACACAATCAGGAGTGGGAAATATTGTTACAAGCCAAT
CATGGATAGAACATGTTGTCCCCAGTACACAATCAGACTTGATGTCACCA
ACGCCAAATTACGGAAATCTCAAAAGAAAGTCATCAAAAACTTCAACAAA
TACTTAACCACTGGTATTCGTCCAAAGCAACCATCCAAAACAGATCAAAA
AGCTTCTGGGGGAGGAGAAGTAGACGAGGATAACAATTGTATAGATGAAC
CTTGTGGTGGAGCAAGAGAAGTAAAAGCCCCTAAGATGGATATCAGTTTT
ACTGGTGGCATTGTGAATGACTTGATGTCACCAACGCCAAATTACGGAAA
TCTCAAAAGAAAGTCATCAAAAACTTCAACAAATACTTAACCACTGGTAT
TCGTCCAAAGCAACCATCCAAAACAGATCAAAAAGCTTCTGGGGGAGGAG
AAGTAGACGAGGATAACAATTGTATAGATGAACCTTGTGGTGGAGCAAGA
GAAGTAAAAGCCCCTAAGATGGATATCAGTTTTACTGGTGGCATTGTGAA
TGGTGCTGACCCAAGTAAACCAAAATGTCGGAAAGCTAAAGAAGTGAGAA
AAGAACGGAAACAGATGAAACAAAAGGTTAATACAGTGCTGACCCAAGTA
AACCAAAATGTCGGAAAGCTAAAGAAGTGAGAAAAGAACGGAAACAGATG
AAACAAAAGGTTAATACACCACACGAACAAATAACAAGTAAACAAAACAA
GAACAAAGAAAAAACATACGAAGAATGGATAGACGGTGTACCCGAAGATG
CTAAAATAAAGTTTGAGCCACACGAACAAATAACAAGTAAACAAAACAAG
AACAAAGAAAAAACATACGAAGAATGGATAGACGGTGTACCCGAAGATGC
TAAAATAAAGTTTGAGGTGAAATTAGTTCGTTGCTGTCCAGAAGATGAAG
ATTTTAAACAGACTTTTCGTCAAGAGTTGGAAGTCTATCAGAAATATCAA
ATTGAAATACATAAAGATGACCCTGACGAGGTCGATGAAAGACAGGTGAA
ATTAGTTCGTTGCTGTCCAGAAGATGAAGATTTTAAACAGACTTTTCGTC
AAGAGTTGGAAGTCTATCAGAAATATCAAATTGAAATACATAAAGATGAC
CCTGACGAGGTCGATGAAAGACAGTTTCGGAGATTTTTATGTGAAGGTCC
ACTCGTGTTTCGGAGATTTTTATGTGAAGGTCCACTCGTGCCAGTATACG
GGGACGATGATGAAGATGAAGACTTGGACATCAATGGAATCCCTTCTTGT
GGTTTAGGTGCTTTCCATCAACAATATTACCTCGATGCCAGTATACGGGG
ACGATGATGAAGATGAAGACTTGGACATCAATGGAATCCCTTCTTGTGGT
TTAGGTGCTTTCCATCAACAATATTACCTCGATGGTCGATTAGTTGCGGT
TGGTGTTCTAGACATTTTACCGAACATTGTTTCTTCGAAATATTTGTTTT
ACGATCCTGAATATCAATTCCTTTCTTTGGGAACTTACTCTGCATTAAGG
TCGATTAGTTGCGGTTGGTGTTCTAGACATTTTACCGAACATTGTTTCTT
CGAAATATTTGTTTTACGATCCTGAATATCAATTCCTTTCTTTGGGAACT
TACTCTGCATTAAGGGAGATATATTTTATCCGTTCGTTGTATCGAGAAAG
TTTATCCATCAAATACTACTACATGGGTTTCTACATTCATTCTTGTCTAA
AAATGAAATATAAGGGAGATATATTTTATCCGTTCGTTGTATCGAGAAAG
TTTATCCATCAAATACTACTACATGGGTTTCTACATTCATTCTTGTCTAA
AAATGAAATATAAGGGTAGCTTTTTCCCGTCGTATTTATTATGTCCCGAA
ACATACATGTGGAAAAGTATAGAAGACTGCTTCGAAAAGTTAGATGCAAG
TAAATACGCTAGATTGGAAGAAGATAAAAATAAAGGGTAGCTTTTTCCCG
TCGTATTTATTATGTCCCGAAACATACATGTGGAAAAGTATAGAAGACTG
CTTCGAAAAGTTAGATGCAAGTAAATACGCTAGATTGGAAGAAGATAAAA
ATAAAGTTGCGGAACAAGTCAATGCATCTGATTCGCTAATTTTGCACAAA
GGACGTGCCATGCCATTTCAGTTGCGGAACAAGTCAATGCATCTGATTCG
CTAATTTTGCACAAAGGACGTGCCATGCCATTTCAGGTCTTCATATCATT
AGTGAGTAGTGAATCTGAAATATCTGACCACAAAAACACTGTTGAAGAAT
ATACTACTTTAGTTGGAGAAGCTTGTAAATCCATACTGTTGTTTCGAAGC
TGAGTCTTCATATCATTAGTGAGTAGTGAATCTGAAATATCTGACCACAA
AAACACTGTTGAAGAATATACTACTTTAGTTGGAGAAGCTTGTAAATCCA
TACTGTTGTTTCGAAGCTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000076_pilon | genome | sc0000076_pilon:428047..434658 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1369-1485:118 |
| Aaloc | 1306-1368:396 |
| Aaloc | 1183-1302:769 |
| Aaloc | 1084-1182:1461 |
| Aaloc | 970-1080:1852 |
| Aaloc | 871-966:2365 |
| Aaloc | 838-870:2818 |
| Aaloc | 709-837:3503 |
| Aaloc | 610-708:4093 |
| Aaloc | 529-609:4379 |
| Aaloc | 295-525:5010 |
| Aaloc | 232-291:5263 |
| Aaloc | 169-228:5678 |
| Aaloc | 94-165:5982 |
| Aaloc | 1-90:6613 |
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