XLOC_036367 (mRNA) -

Overview
NameXLOC_036367
Unique NameXLOC_036367
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000076_pilon:529667..530809-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_036367 ID=XLOC_036367|Name=XLOC_036367|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1143bp|location=Sequence derived from alignment at sc0000076_pilon:529667..530809- (Clytia hemisphaerica_ch_hm2_pilon)
GTTGCTAAAGAGGAAAGGGGACAATTTAACACAACGACCACTTCTCTTCC GACTACCACAACTACAACAACGACCACCCCTACTACGACAACGACCACTC CCACTACGACAATGACCACCCCTACCACGACAACGACCATTCCTACTACT ACAACAACGACCACCCCTACTACGACAACGACCACTCCCACTACGACAAC GACCACCCCTACCACGACAACGACCACTCCTACTACTGCAACAACGACCA CCTCTACTACAACAACGACCACTCCTACTACAACAACGACCACTCCTACA ACGACGACGACCACCCCTACTACAACAACAACTACCAACCCTACCACGAC AACGACCACCCCTACTACAACAACGACCACCCCTACCACAACAACGACTA CCCCTACTACAACAACAACTACCAACCCTACCACGACAACGACCACCCCT AGTACAACAACGACTACCCCTACTACGACTACCCCTACTACAACAACAAC GACCACCCCTACCACAACAACAATCACACAAACTACAACAACAACCACCC CCACAACAACGACCATTATGCTTACTACATCAACGACCCAGCCTACAACA GAGACTTTTGTAACAACAGAATACACTACACGAGACACGATCGAAAGTAC AAAACGAAGAACTTCAACTTTTGAAATGCCAACACCCACCCCATACACAG CTGACCCTGATTTCTCCAAAGTTCTTACTTTATATCCTAAATCTACTGAC GAGCCTTTTATTTCCAGTACACCTGCGACTGTTAAAGACTTACGCAACGA AATCAAGAAAGAGCTAGAGAGGATTAAGTCGGCTTTAAATGAACTAGGAG ATAAAACAAATGATCTCCCTTCACCAAAACCATCTGCCCCAACTTCCGTT GAAGAGCAAATGGCAGCCAAAGAAATTTTTAAATTAGAGCAAGCACGCTT AGAACTATTAGACGAAATTAAGGAAATTGATAATACACTGATTATGCTGA AAGTGAAAAATAATTTGACGACGACAAGGAGTAGTGTAAATACAACTGAT GTGAATCAGGGGAATGGAACCGAGACTGGAACGAATGACAGACGGTTTGG TGACTCGCTGGACGAGATCGTTGACCGTGTTATTGAAAAGGTA

Coding sequence (CDS) from alignment at sc0000076_pilon:529667..530809-

>XLOC_036367 ID=XLOC_036367|Name=XLOC_036367|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2052bp|location=Sequence derived from alignment at sc0000076_pilon:529667..530809- (Clytia hemisphaerica_ch_hm2_pilon)
GTTGCTAAAGAGGAAAGGGGACAATTTAACACAACGACCACTTCTCTTCC
GACTACCACAACTACAACAACGACCACCCCTACTACGACAACGACCACTC
CCACTACGACAATGACCACCCCTACCACGACAACGACCATTCCTACTACT
ACAACAACGACCACCCCTACTACGACAACGACCACTCCCACTACGACAAC
GACCACCCGTTGCTAAAGAGGAAAGGGGACAATTTAACACAACGACCACT
TCTCTTCCGACTACCACAACTACAACAACGACCACCCCTACTACGACAAC
GACCACTCCCACTACGACAATGACCACCCCTACCACGACAACGACCATTC
CTACTACTACAACAACGACCACCCCTACTACGACAACGACCACTCCCACT
ACGACAACGACCACCCCAACAACTACCAACCCTACCACGACAACGACCAC
CCCTACTACAACAACGACCACCCCTACCACAACAACGACTACCCCTACTA
CAACAACAACTACCAACCCTACCACGACAACGACCACCCCTAGTACAACA
ACGACTACCCCTACTACGACTACCCCTACTACAACAACAACGACCACCCC
TACCACAACAACAATCACACAAACTACAACAACAACCACCCCCACAACAA
CGACCATTATGCTTACTACATCAACGACCCAGCCTACAACAGAGACTTTT
GTAACAACAGAATACACTACACGAGACACGATCGAAAGTACAAAACGAAG
AACTTCAACTTTTGAAATGCCAACACCCACCCCATACACAGCTGACCCTG
ATTTCTCCAAAGTTCTTACTTTATATCCTAAATCTACTGACGAGCCTTTT
ATTTCCAGTACACCTGCGACTGTTAAAGACTTACGCAACGAAATCAAGAA
AGAGCTAGAGAGGATTAAGTCGGCTTTAAATGAACTAGGAGATAAAACAA
ATGATCTCCCTTCACCAAAACCATCTGCCCCAACTTCCGTTGAAGAGCAA
ATGGCAGCCAAAGAAATTTTTAAATTAGAGCAAGCACGCTTAGAACTATT
AGACGAAATTAAGGAAATTGATAATACACTGATTATGCTGAAAGTGAAAA
ATAATTTGACGACGACAAGGAGTAGTGTAAATACAACTGATGTGAATCAG
GGGAATGGAACCGAGACTGGAACGAATGACAGACGGTTTGGTGACTCGCT
GGACGAGATCGTTGACCGTGTTATTGAAAAGGTACAACAACTACCAACCC
TACCACGACAACGACCACCCCTACTACAACAACGACCACCCCTACCACAA
CAACGACTACCCCTACTACAACAACAACTACCAACCCTACCACGACAACG
ACCACCCCTAGTACAACAACGACTACCCCTACTACGACTACCCCTACTAC
AACAACAACGACCACCCCTACCACAACAACAATCACACAAACTACAACAA
CAACCACCCCCACAACAACGACCATTATGCTTACTACATCAACGACCCAG
CCTACAACAGAGACTTTTGTAACAACAGAATACACTACACGAGACACGAT
CGAAAGTACAAAACGAAGAACTTCAACTTTTGAAATGCCAACACCCACCC
CATACACAGCTGACCCTGATTTCTCCAAAGTTCTTACTTTATATCCTAAA
TCTACTGACGAGCCTTTTATTTCCAGTACACCTGCGACTGTTAAAGACTT
ACGCAACGAAATCAAGAAAGAGCTAGAGAGGATTAAGTCGGCTTTAAATG
AACTAGGAGATAAAACAAATGATCTCCCTTCACCAAAACCATCTGCCCCA
ACTTCCGTTGAAGAGCAAATGGCAGCCAAAGAAATTTTTAAATTAGAGCA
AGCACGCTTAGAACTATTAGACGAAATTAAGGAAATTGATAATACACTGA
TTATGCTGAAAGTGAAAAATAATTTGACGACGACAAGGAGTAGTGTAAAT
ACAACTGATGTGAATCAGGGGAATGGAACCGAGACTGGAACGAATGACAG
ACGGTTTGGTGACTCGCTGGACGAGATCGTTGACCGTGTTATTGAAAAGG
TA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_036367XLOC_036367-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000076_pilongenomesc0000076_pilon:529667..530809 -
Properties
Property NameValue
Aaloc256-1029:775
Aaloc211-252:817
Aaloc1-207:1144