|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000076_pilon:510222..513522+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_036366 ID=XLOC_036366|Name=XLOC_036366|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3301bp|location=Sequence derived from alignment at sc0000076_pilon:510222..513522+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTGGAATGCAATATTCatcagaaagatttttcatgCTTTAGAAGTTTT
CATGTTCATTTTTCTAATCGTTGTTAATGTGTCATTTATTTTTCGTCGCT
CTGCGGAATCAGGTATGTCAGCAGCTCTCTGACACGTTTTCTTTATGTCA
TATTCAGTACACATTGTTGCTTTACCCCACCCCCAAGCGATATACCTCAA
ATGTTGCCCTTATTATTCGAATTGATCTTAGGTCAAACATAATAGAAGAC
TGATccaaccaatgaagtataagcccaaatggctagaatcgaatctcctt
ggtaggattttaagccaacaaatcctaccaaagttgcgcggcctagcaCG
ATCCGCctagttttaaaaaaaatgactcAAACTAagatttaccgctaaat
ttcgaaaagaatatcactcaaaaacaaaaaaattactagATTCAATCATC
GTCAAAAATATGgtgcatattttaaggcttcactttttcttgcctgagaa
aggttatagattcgattctagcccttcgggcttatactttaTTGGATCCA
ACACTTTTTCAGCTACGGTTTGAACAAAAACTATAAGGGCATATATAATT
CAATTGATATCATAGACGTAAAAATATGGACGTAACCTCTTGATTTGTCC
AACATAGGTTTACCCACTACCTAGTACCCATGCCTCATCTCCTTTTTAGA
TTGATCAGGAGATTTGCCCTGAAAGCCTCTGTAttttttttAGACCAGAG
CTGAATTTCATCAtataaaatccaaataaaaaggTCAATGATGTTCGCCT
TTGGATAAAGGGTGTTTCATAACACCCATTTCCCTAGAAAATCTTTTTAC
ACCACAACCAAAGCGCATCTACAAACACATGGTAGCCACTCTCTAAAGCA
TATTTATATTTaggcgaccgtagtgcagtgggagagcatccagctatggt
tcgcaaggttgtgggttcaacccccagccagcTCGTACCTcgtaccaaag
atttccaagatggtacttgatgcctctctgcttgatgcttagcaattaag
agaaggatcaaggtaAGTGGAGCTATCCAGGGAGAAAAAGTGGCGCCCTC
CCGTACCTTCcgtaccttcgggtagataactatcgaaagaggagtcttct
ggtcgcctccgactgcggtcgcagacttactgaCTTACTAATGCATATTC
TTTCGCTTTGTAGACGATAAAATACCGTCATCCTTTCCATCAGAGTCCTT
TCAAAACACTAGCTCTGCAGTGTCACACGTATGGATTGATAAACAATCTT
CGAACCCGGTGGCTGATGGGGATTTTATGAAGATCTCCAAAGATTGGATG
AAAAGTAAACAAGTCGTCAAAAGTCTCAAAAAGCCGGGTATGTTGTACTG
TATTACAGGTCTGGAAAATTCATTTATGTTTGCTTTTACAGCAGAAAAAA
TTCCTTGAAAATATCAGGTGGTGGGTCTACAATCAATGAAAATTTAAAGT
CTTAAAATAGAGGCCTAAAATTTTTACATCAATTTCTAATGATAACTTTT
ATTGAGTAGTTGACCATGTGATCTTATTAAACTATCTCTTGTCGGAGACG
TACGGGAGTGGTCAACACCAAGAAACCaacaaatttttcttgaacCACTA
TCAACATTACACAGACAAAATCCTCATTTGGTCACTGAACGGTACTTTTG
AAACCGAAATACCGATAGAAAAAGAGCGTACGCCCCCTAATTAGTTGACG
ATGGTTCAACTATTTATAGGTTCCGaattgaatcaaaataaacaattttc
attttttttaaggttttgctgGAATAAATGACATGGAGAAATATTTCAAG
TCAAACAATTTGAAACTTGGTCAGAAACGAACAGGGAAAGGTACGGAGCT
CATTCTTAGTTTGTTAATATCCCTAAAGTACATTCACTGTGCCGTATCCC
ATCTAACGAGTCCCGTCTCAATCTCGGAGCCCTCTTAAGCTAGAAATCAT
TCTTTTCACCAAAACTAGTAAGGCCTAAAAGTCTGGAGCTATTTATTGTG
TAGACTAGCCGAATACAAGCATTTGCGAATGTGAGAAAGTTGCATATGCA
AGAAATTTCCTTCATTTATTTTGCTCTTTCAGCTTTCGTTGTTTTTGGGA
TTCCAACCGTCAAGAGAAGCAAAGCTTATTATGTCATCCAAACGGTATCC
TCTTTGCTCAAACACATGaacattttagaaaagaaaaatgttgtcATCGT
CATTTTTGTGGCAGATCTTGACGAAGGTTTTCTTAGGAAAGTCGTAAAAG
ATGTTCGAGAGAACTTTCCAGGCGAAGTTAAAAACGGTATTATTCAAGTA
GTCGCTCCTGATAAAGCCTACTATCCTAAGAATCTGGATAATTTGCCAAG
ACTGTTTGGCGATAAACAAGATCGAGTCCGCTGGAGATCGAAGcaatgtc
tcgattattcataCTTATATTATTACTGTAAAGATATGGCGCAATATTTT
GTTCAGCTTGAAGATGACGTTATCGCTGTGGACGATTTTATGCAGAAAAT
GCGACAATTCATAACGAAAAACGAGAAACTTCGTTGGTCAGTTCTTGAGC
TTGGTGCCCGAGGATTTATCGGAATGACTTATCGGGGAGAGCATTTAGAA
TCGTTGGCAAAATTTGTCAGATATTTCTTCTGGACCATGCCGGTTGATTT
ACTTTTTCGAGTTTATAATGATATCTACTTGTATGAAAATCCAAAGAACT
TTCGCATAAAGAAACCTGTTTTCTTGCATGTCGGTAAATTCTCTTCCTTG
AATGGTCAAGTGAGAAAACTCGAGGATTTGAAGGATATCCCGATAGTTGG
TCGACGACAATTCCAATCGGTAAAAGGAAATCCCGTTGCCGAAATAGAAT
CGGATTTATCGGGATTCTATAAAAGCAATGTGTTAGAGAACCCATACTCG
AGCAAAGGTGTAATGTGGGCAACAAAACCTAAGGATGGTGACACACTGAC
GATAATGTTTAATTCTCCACAGAAAATCAAGAGCATCTTTATCTCTAGCG
GAATGGATGGACATGAAAAAGACAGCTTCTATGAAACTAAATTATACATC
TCTCAAATGAGAGGTAAAGCGAATTCGAAATGTGGGAAGTTTGAGCTGGT
GAAATTTTACAAAGAAGCAATAATTGATATTACTTTTGATGAACCTAAAG
AAAACGTTCGGTGTGTCAAACTGGAGTTGACAACTGTCCAGAAAACGAAA
GGAATTTCAAACTGGTTGATTATTGAAGAAATTGCTATTCTTGATAGTTG
A Coding sequence (CDS) from alignment at sc0000076_pilon:510222..513522+ >XLOC_036366 ID=XLOC_036366|Name=XLOC_036366|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3066bp|location=Sequence derived from alignment at sc0000076_pilon:510222..513522+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTGGAATGCAATATTCatcagaaagatttttcatgCTTTAGAAGTTTT
CATGTTCATTTTTCTAATCGTTGTTAATGTGTCATTTATTTTTCGTCGCT
CTGCGGAATCAGATGTGGAATGCAATATTCatcagaaagatttttcatgC
TTTAGAAGTTTTCATGTTCATTTTTCTAATCGTTGTTAATGTGTCATTTA
TTTTTCGTCGCTCTGCGGAATCAGACGATAAAATACCGTCATCCTTTCCA
TCAGAGTCCTTTCAAAACACTAGCTCTGCAGTGTCACACGTATGGATTGA
TAAACAATCTTCGAACCCGGTGGCTGATGGGGATTTTATGAAGATCTCCA
AAGATTGGATGAAAAGTAAACAAGTCGTCAAAAGTCTCAAAAAGCCGGAC
GATAAAATACCGTCATCCTTTCCATCAGAGTCCTTTCAAAACACTAGCTC
TGCAGTGTCACACGTATGGATTGATAAACAATCTTCGAACCCGGTGGCTG
ATGGGGATTTTATGAAGATCTCCAAAGATTGGATGAAAAGTAAACAAGTC
GTCAAAAGTCTCAAAAAGCCGGgttttgctgGAATAAATGACATGGAGAA
ATATTTCAAGTCAAACAATTTGAAACTTGGTCAGAAACGAACAGGGAAAG
gttttgctgGAATAAATGACATGGAGAAATATTTCAAGTCAAACAATTTG
AAACTTGGTCAGAAACGAACAGGGAAAGCTTTCGTTGTTTTTGGGATTCC
AACCGTCAAGAGAAGCAAAGCTTATTATGTCATCCAAACGGTATCCTCTT
TGCTCAAACACATGaacattttagaaaagaaaaatgttgtcATCGTCATT
TTTGTGGCAGATCTTGACGAAGGTTTTCTTAGGAAAGTCGTAAAAGATGT
TCGAGAGAACTTTCCAGGCGAAGTTAAAAACGGTATTATTCAAGTAGTCG
CTCCTGATAAAGCCTACTATCCTAAGAATCTGGATAATTTGCCAAGACTG
TTTGGCGATAAACAAGATCGAGTCCGCTGGAGATCGAAGcaatgtctcga
ttattcataCTTATATTATTACTGTAAAGATATGGCGCAATATTTTGTTC
AGCTTGAAGATGACGTTATCGCTGTGGACGATTTTATGCAGAAAATGCGA
CAATTCATAACGAAAAACGAGAAACTTCGTTGGTCAGTTCTTGAGCTTGG
TGCCCGAGGATTTATCGGAATGACTTATCGGGGAGAGCATTTAGAATCGT
TGGCAAAATTTGTCAGATATTTCTTCTGGACCATGCCGGTTGATTTACTT
TTTCGAGTTTATAATGATATCTACTTGTATGAAAATCCAAAGAACTTTCG
CATAAAGAAACCTGTTTTCTTGCATGTCGGTAAATTCTCTTCCTTGAATG
GTCAAGTGAGAAAACTCGAGGATTTGAAGGATATCCCGATAGTTGGTCGA
CGACAATTCCAATCGGTAAAAGGAAATCCCGTTGCCGAAATAGAATCGGA
TTTATCGGGATTCTATAAAAGCAATGTGTTAGAGAACCCATACTCGAGCA
AAGGTGTAATGTGGGCAACAAAACCTAAGGATGGTGACACACTGACGATA
ATGTTTAATTCTCCACAGAAAATCAAGAGCATCTTTATCTCTAGCGGAAT
GGATGGACATGAAAAAGACAGCTTCTATGAAACTAAATTATACATCTCTC
AAATGAGAGGTAAAGCGAATTCGAAATGTGGGAAGTTTGAGCTGGTGAAA
TTTTACAAAGAAGCAATAATTGATATTACTTTTGATGAACCTAAAGAAAA
CGTTCGGTGTGTCAAACTGGAGTTGACAACTGTCCAGAAAACGAAAGGAA
TTTCAAACTGGTTGATTATTGAAGAAATTGCTATTCTTGATAGTTGACTT
TCGTTGTTTTTGGGATTCCAACCGTCAAGAGAAGCAAAGCTTATTATGTC
ATCCAAACGGTATCCTCTTTGCTCAAACACATGaacattttagaaaagaa
aaatgttgtcATCGTCATTTTTGTGGCAGATCTTGACGAAGGTTTTCTTA
GGAAAGTCGTAAAAGATGTTCGAGAGAACTTTCCAGGCGAAGTTAAAAAC
GGTATTATTCAAGTAGTCGCTCCTGATAAAGCCTACTATCCTAAGAATCT
GGATAATTTGCCAAGACTGTTTGGCGATAAACAAGATCGAGTCCGCTGGA
GATCGAAGcaatgtctcgattattcataCTTATATTATTACTGTAAAGAT
ATGGCGCAATATTTTGTTCAGCTTGAAGATGACGTTATCGCTGTGGACGA
TTTTATGCAGAAAATGCGACAATTCATAACGAAAAACGAGAAACTTCGTT
GGTCAGTTCTTGAGCTTGGTGCCCGAGGATTTATCGGAATGACTTATCGG
GGAGAGCATTTAGAATCGTTGGCAAAATTTGTCAGATATTTCTTCTGGAC
CATGCCGGTTGATTTACTTTTTCGAGTTTATAATGATATCTACTTGTATG
AAAATCCAAAGAACTTTCGCATAAAGAAACCTGTTTTCTTGCATGTCGGT
AAATTCTCTTCCTTGAATGGTCAAGTGAGAAAACTCGAGGATTTGAAGGA
TATCCCGATAGTTGGTCGACGACAATTCCAATCGGTAAAAGGAAATCCCG
TTGCCGAAATAGAATCGGATTTATCGGGATTCTATAAAAGCAATGTGTTA
GAGAACCCATACTCGAGCAAAGGTGTAATGTGGGCAACAAAACCTAAGGA
TGGTGACACACTGACGATAATGTTTAATTCTCCACAGAAAATCAAGAGCA
TCTTTATCTCTAGCGGAATGGATGGACATGAAAAAGACAGCTTCTATGAA
ACTAAATTATACATCTCTCAAATGAGAGGTAAAGCGAATTCGAAATGTGG
GAAGTTTGAGCTGGTGAAATTTTACAAAGAAGCAATAATTGATATTACTT
TTGATGAACCTAAAGAAAACGTTCGGTGTGTCAAACTGGAGTTGACAACT
GTCCAGAAAACGAAAGGAATTTCAAACTGGTTGATTATTGAAGAAATTGC
TATTCTTGATAGTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000076_pilon | genome | sc0000076_pilon:510222..513522 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 367-1533:2135 |
| Aaloc | 289-363:1815 |
| Aaloc | 115-285:1216 |
| Aaloc | 1-111:1 |
|
