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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000331_pilon:48430..50301- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_036362 ID=XLOC_036362|Name=XLOC_036362|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1872bp|location=Sequence derived from alignment at sc0000331_pilon:48430..50301- (Clytia hemisphaerica_ch_hm2_pilon)
AACAATAAATCTTACATTGACCACATACTAACATCACACAATATCCTCAG
CAAAATAGTCGGCACAGGAATAACCCCACCGCACTACCTAAATACTAGTG
ACCACTTACCGGTAACAGCCGAAATGACCATGGAAACAAGTAACACTAAT
ACATATAAAGCTAAACAATCCAACCATATTCCAAACTTCATGTGGAAGAA
TAAAAATTTCTTAAACAACTACAATTCATTAGTCACAAACAAGATAGAGA
CCATAAAATGCCAGGACATTATCGAAGAAGAGATTTCTACCTTACATCAA
ACATTAAAAGACTGTGCTAGCCAAGCATATTTAGATTTGAAAAAGGAGTC
TGACTTTCATTTTGTTAACACTAAGCGATGGTGGAGTGCTGACCTAACGA
ACAAAAGAAAAATCCTTCAAAAAATGTTCAATTCCTGGAGAGAGGACAAT
TTTTCCAGAGACCCTCATAACGTCCATTATAACAGATACCTACTTGCCAG
AAAAGAATTTCGAAACCTAGCCAAAAAGTCCAAAAATCAATCTACTGCAG
AGCATTACGTTAATATAGATAAAATTAAGAAGATCAAACCACGTTCCTAC
TGGAATCAAATACGATCGGCCAAATCAGAAGAGTCCAAACTATACACAAT
TAACAACAGCTCTGATATTCCTGATATTACAAAAGGCTTCAACTCACACT
TTGAAAATCTTCTCAACACTCCCAGAACAGACAACATTGACAACAATACT
TCCAATCAGCATCTTGATAAAATGTTAGGAGAACTAGAAGAACACAGAGA
AAATGACTTTCACATCACAGATTCCGATATACTTTCCGCTATCAACAGTC
TTAACAAGAACAAAACCTTTGACCCCTACGAGATCAAGGCAGAACATTTC
ATTCACTGTACCAACGAAAAGGTTTTATCATACATAGCTAACCTTGTCAA
CAGAATCCTAAACGCGCCCAGACTACCAACAATCCTCTCAACTTCCCACA
TTGTCCCAATTTTGAAATCACACCGCAAACCTATCAACGACCCAAACAAC
TACCGTGGAGTGAGCCTAATTCCAATCCTAACCAAACTCATAGAAAAACT
GATCATTCTTAAATGCCCTCAACTGAAAGAACATAAAGACACCCAATTTG
GATTCACTTCAGACGCCTCCACTATACATGCTGAACTTTTGATACGTGAC
ACCATCTCATTTTACAACTCTAAAGGCTCACCGGTTTACATCTGCAGCCT
GGATGCTGAAAAGGCGTTCGATAGTTGTAACTGGTATGTCCTTTTCGAGA
AATTGAAAAATCAAAGAAAGCTACCAGATGTTGTGCTAAGATTTTTGATA
AAATTATACATAAATGGTGAGGCTGCTACAAAATACAGAAACTTCATTAC
ATCACCCTTTCGTCTTGCCCAGGGTGTACGTCAAGGCTCAATATTATCCC
CATACTTGTATAACTTTTACACAGAAGACATCATTGATAATATTCAGAGA
CTCAATATCGGGACATATCTACCAGGTCAAATTAACACATCGATTATAGT
ATTCGCTGACGATATCATCCTCTTGAGTCCAAATTTGAAACACCTACAGC
AAATGATTAACGAATGTACACTTTTTGGAATTGAAAACGGTCTCAAATTC
AACCCTTCTAAAACACAATTTCTGATATCCGGGCAATCACCTTTATGCAA
TCCATGTATTACCCTCAATGAAAAACAAATTGAACAGCAGTGTCAACTCA
AACATCTGGGTTTCAATTGGAAAATGGACAGAGACAAACTTTCGTTGAAA
AATCACCAGGACTCTCGAATTGCAGAAATGTGGGCGACGACAGCATCGTT
AACTTCATGTGGTGTCAGGAAA Coding sequence (CDS) from alignment at sc0000331_pilon:48430..50301- >XLOC_036362 ID=XLOC_036362|Name=XLOC_036362|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3744bp|location=Sequence derived from alignment at sc0000331_pilon:48430..50301- (Clytia hemisphaerica_ch_hm2_pilon)
AACAATAAATCTTACATTGACCACATACTAACATCACACAATATCCTCAG
CAAAATAGTCGGCACAGGAATAACCCCACCGCACTACCTAAATACTAGTG
ACCACTTACCGGTAACAGCCGAAATGACCATGGAAACAAGTAACACTAAT
ACATATAAAGCTAAACAATCCAACCATATTCCAAACTTCATGTGGAAGAA
TAAAAATTTCTTAAACAACTACAATTCATTAGTCACAAACAAGATAGAGA
CCATAAAATGCCAGGACATTATCGAAGAAGAGATTTCTACCTTACATCAA
ACATTAAAAGACTGTGCTAGCCAAGCATATTTAGATTTGAAAAAGGAGTC
TGACTTTCATTTTGTTAACACTAAGCGATGGTGGAGTGCTGACCTAACGA
ACAAAAGAAAAATCCTTCAAAAAATGTTCAATTCCTGGAGAGAGGACAAT
TTTTCCAGAGACCCTCATAACGTCCATTATAACAGATACCTACTTGCCAG
AAAAGAATTTCGAAACCTAGCCAAAAAGTCCAAAAATCAATCTACTGCAG
AGCATTACGTTAATATAGATAAAATTAAGAAGATCAAACCACGTTCCTAC
TGGAATCAAATACGATCGGCCAAATCAGAAGAGTCCAAACTATACACAAT
TAACAACAGCTCTGATATTCCTGATATTACAAAAGGCTTCAACTCACACT
TTGAAAATCTTCTCAACACTCCCAGAACAGACAACATTGACAACAATACT
TCCAATCAGCATCTTGATAAAATGTTAGGAGAACTAGAAGAACACAGAGA
AAATGACTTTCACATCACAGATTCCGATATACTTTCCGCTATCAACAGTC
TTAACAAGAACAAAACCTTTGACCCCTACGAGATCAAGGCAGAACATTTC
ATTCACTGTACCAACGAAAAGGTTTTATCATACATAGCTAACCTTGTCAA
CAGAATCCTAAACGCGCCCAGACTACCAACAATCCTCTCAACTTCCCACA
TTGTCCCAATTTTGAAATCACACCGCAAACCTATCAACGACCCAAACAAC
TACCGTGGAGTGAGCCTAATTCCAATCCTAACCAAACTCATAGAAAAACT
GATCATTCTTAAATGCCCTCAACTGAAAGAACATAAAGACACCCAATTTG
GATTCACTTCAGACGCCTCCACTATACATGCTGAACTTTTGATACGTGAC
ACCATCTCATTTTACAACTCTAAAGGCTCACCGGTTTACATCTGCAGCCT
GGATGCTGAAAAGGCGTTCGATAGTTGTAACTGGTATGTCCTTTTCGAGA
AATTGAAAAATCAAAGAAAGCTACCAGATGTTGTGCTAAGATTTTTGATA
AAATTATACATAAATGGTGAGGCTGCTACAAAATACAGAAACTTCATTAC
ATCACCCTTTCGTCTTGCCCAGGGTGTACGTCAAGGCTCAATATTATCCC
CATACTTGTATAACTTTTACACAGAAGACATCATTGATAATATTCAGAGA
CTCAATATCGGGACATATCTACCAGGTCAAATTAACACATCGATTATAGT
ATTCGCTGACGATATCATCCTCTTGAGTCCAAATTTGAAACACCTACAGC
AAATGATTAACGAATGTACACTTTTTGGAATTGAAAACGGTCTCAAATTC
AACCCTTCTAAAACACAATTTCTGATATCCGGGCAATCACCTTTATGCAA
TCCATGTATTACCCTCAATGAAAAACAAATTGAACAGCAGTGTCAACTCA
AACATCTGGGTTTCAATTGGAAAATGGACAGAGACAAACTTTCGTTGAAA
AATCACCAGGACTCTCGAATTGCAGAAATGTGGGCGACGACAGCATCGTT
AACTTCATGTGGTGTCAGGAAAAACAATAAATCTTACATTGACCACATAC
TAACATCACACAATATCCTCAGCAAAATAGTCGGCACAGGAATAACCCCA
CCGCACTACCTAAATACTAGTGACCACTTACCGGTAACAGCCGAAATGAC
CATGGAAACAAGTAACACTAATACATATAAAGCTAAACAATCCAACCATA
TTCCAAACTTCATGTGGAAGAATAAAAATTTCTTAAACAACTACAATTCA
TTAGTCACAAACAAGATAGAGACCATAAAATGCCAGGACATTATCGAAGA
AGAGATTTCTACCTTACATCAAACATTAAAAGACTGTGCTAGCCAAGCAT
ATTTAGATTTGAAAAAGGAGTCTGACTTTCATTTTGTTAACACTAAGCGA
TGGTGGAGTGCTGACCTAACGAACAAAAGAAAAATCCTTCAAAAAATGTT
CAATTCCTGGAGAGAGGACAATTTTTCCAGAGACCCTCATAACGTCCATT
ATAACAGATACCTACTTGCCAGAAAAGAATTTCGAAACCTAGCCAAAAAG
TCCAAAAATCAATCTACTGCAGAGCATTACGTTAATATAGATAAAATTAA
GAAGATCAAACCACGTTCCTACTGGAATCAAATACGATCGGCCAAATCAG
AAGAGTCCAAACTATACACAATTAACAACAGCTCTGATATTCCTGATATT
ACAAAAGGCTTCAACTCACACTTTGAAAATCTTCTCAACACTCCCAGAAC
AGACAACATTGACAACAATACTTCCAATCAGCATCTTGATAAAATGTTAG
GAGAACTAGAAGAACACAGAGAAAATGACTTTCACATCACAGATTCCGAT
ATACTTTCCGCTATCAACAGTCTTAACAAGAACAAAACCTTTGACCCCTA
CGAGATCAAGGCAGAACATTTCATTCACTGTACCAACGAAAAGGTTTTAT
CATACATAGCTAACCTTGTCAACAGAATCCTAAACGCGCCCAGACTACCA
ACAATCCTCTCAACTTCCCACATTGTCCCAATTTTGAAATCACACCGCAA
ACCTATCAACGACCCAAACAACTACCGTGGAGTGAGCCTAATTCCAATCC
TAACCAAACTCATAGAAAAACTGATCATTCTTAAATGCCCTCAACTGAAA
GAACATAAAGACACCCAATTTGGATTCACTTCAGACGCCTCCACTATACA
TGCTGAACTTTTGATACGTGACACCATCTCATTTTACAACTCTAAAGGCT
CACCGGTTTACATCTGCAGCCTGGATGCTGAAAAGGCGTTCGATAGTTGT
AACTGGTATGTCCTTTTCGAGAAATTGAAAAATCAAAGAAAGCTACCAGA
TGTTGTGCTAAGATTTTTGATAAAATTATACATAAATGGTGAGGCTGCTA
CAAAATACAGAAACTTCATTACATCACCCTTTCGTCTTGCCCAGGGTGTA
CGTCAAGGCTCAATATTATCCCCATACTTGTATAACTTTTACACAGAAGA
CATCATTGATAATATTCAGAGACTCAATATCGGGACATATCTACCAGGTC
AAATTAACACATCGATTATAGTATTCGCTGACGATATCATCCTCTTGAGT
CCAAATTTGAAACACCTACAGCAAATGATTAACGAATGTACACTTTTTGG
AATTGAAAACGGTCTCAAATTCAACCCTTCTAAAACACAATTTCTGATAT
CCGGGCAATCACCTTTATGCAATCCATGTATTACCCTCAATGAAAAACAA
ATTGAACAGCAGTGTCAACTCAAACATCTGGGTTTCAATTGGAAAATGGA
CAGAGACAAACTTTCGTTGAAAAATCACCAGGACTCTCGAATTGCAGAAA
TGTGGGCGACGACAGCATCGTTAACTTCATGTGGTGTCAGGAAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000331_pilon | genome | sc0000331_pilon:48430..50301 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 622-2493:1873 |
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