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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000296_pilon:149241..152704+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_036339 ID=XLOC_036339|Name=XLOC_036339|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3464bp|location=Sequence derived from alignment at sc0000296_pilon:149241..152704+ (Clytia hemisphaerica_ch_hm2_pilon)
TATTTCGAAATATTTATTCTTTTAACTATAGCAGTAAATTGTGTTTTCAT
GGCATTATCAGATCCTCCAGAGCTTATGGAGTAAGTATCGCAACTAACAC
AATATTCATAATTTCACCTTCTCTGGAAAGCCGATTATCATCTATAGCTT
TGACTTAATTTATATTTAATCTAATCATTGAATTGATCGGCAATCTCATT
TTGGATGAATAATTTGAGAGCTCCTTTTGATATTTGATCGATCTCGTAGC
ATCGGAAAACCCGAAAAGGTATACCCTCCAGATTGATACCAAAACAGAGT
AGTAATAAACTTACCAACATTTCGTGACCAGTAATTATCTCTCAGTAGTT
CGAACACCATTCTGATCGATTTCAAAACTTCTTcatcatttctttttctt
tccagATTCATATTTGCCGCAATCTACACGTTAGAAAtgataatcaaaat
tttagccaaaggTTTTGTTATGCACAAATATTCTTATTTACGGAACTCCT
GGAATTGGTTAGATTTCGTTGTAGTTGTTTTAGGGTAAGTGGTGATATAC
TTTTTGGTTAACAACCGCAGTGtggtataccttatcggggaaaacttcgt
cggggaaagtgacgaatattttccccgacgaaaattttccccggccttaa
tgcgtttaccaactaccagcaagtgacgaatttttccccgacgaaaattt
tccccaacgaagttttccccgataaggtagcaTTAGGATATGGGACGCAA
GGTATTGGGTTTAGTCCCTGGTCCGTCTTACCAAGAACTCCTGGTCTCAC
CAAGGACTTAGAGGCTTATCTATTAGAACAGATATAATATATATACTTCT
TGTGTTTCTCTGCACAATTAAGAGTGCTCAATACATAAGTAGAGCTTgtt
acataaagattaagaaacgttgtatttcttttcaatactttaagtttctt
gctttcgcattcatcagttgattagaaataactatcaaaacaaaattcca
cgtttatttaaaaaattcaatacagcgtcttcatataaaaaattgacgtc
aatcttTAGAATCGAAGTTTTCAAGTAGGTGTTTGTTTATGTGCCGGCAT
TTTTGAGATAAGTTCAGATCTAGAGTTCAGTAAATTGTCTTTATATGCAA
AGATTATTTCAAATGTTTCATTCAAACAAAGGTCACATTTCAGGCTGCTT
CTGTTGAACGGTTTGCACTTTCTTACAATTCGCCATGTAACTTTAGGGTT
GGTCTGGTTACGAGAATGCCGCCAAAATTCGTTCGAGAGCTCGGtttcat
tttcgtatttggCGTGGTTGAACGATTTCTTGTGGTTCGCATATCGCTTT
TTGAAGGTGTTTCTTCTGCGAGACCGATGTAAATTTTTGGTGGTAAATTC
TCGTCGTCTGTTGTCAGTGTGGCTTCGTAAACAGTGTTTTTAGCTAAGCA
GTTACCGTTCATGGGGCATTGATTTTTGACGATACAGTTGCATGTTTTGG
TTGGTTGTACGATGTTTTGGTTTTTAAGTACTGCTTTGTTATGCCCATCG
ATGATGGCTTTCATGTTGGTCGTGCAGCTATAGCTAACTTTGACTGTATT
TCGATTGAACAGCTTGTGGTATTTATGATGACGAGGAAAGTGTTTGTCGA
TCAACTTCAAGAACTTTTGTGCGATATTTGTTTCGACCGATTTGCTGAAG
GGAGGGTTAAACCAAATGACGTTGCGTTTTCTTTGGCGTGTTTGTGGTCT
GTTCACTGTTGGTGTGTAGGTTAAGTTGGTTTCATAGCCGGCGTCTTTCA
AAGCCTTTTCGTAAATGGGCTTTGCTTCATTGAACTGCACGACCAACATG
AAAGCCATCATCGATGGGCATAACAAAGCAGTACTTAAAAACCAAAACAT
CGTACAACCAACCAAAACATGCAACTGTATCGTCAAAAATCAATGCCCCA
TGAACGGTAACTGCTTAGCTAAAAACACTGTTTACGAAGCCACACTGACA
ACAGACGACGAGAATTTACCACCAAAAATTTACATCGGTCTCGCAGAAAC
AACCTTCAAAAAGCGATATGCGAACCACAAGAAATCGTTCAACCACGcca
aatacgaaaatgaaaCCGAGCTCTCGAACGAATTTTGGCGGCATTCTCGT
AACCAGACCAACCCTAAAGTTACATGGCGAATTGTAAGAAAGTGCAAACC
GTTCAACAGAAGCAGCCTGAAATGTGACCTTTGTTTGAATGAAACATTTG
AAATATCTTTGCATAAAGACAATTTACTGAACTCTAGATCTGAACTTATC
TCAAAATGCCGGCACATAAACAAACACCTACTTGAAAACTTCGATTCTAa
agattgacgtcaattttttatatgaagacgctgtattgaattttttaaat
aaacgtggaattttgttttgatagttatttctaatcaactgatgaatgcg
aaagcaagaaactttaagtattgaaaagaaatacaacgtttcttaatctt
tatgtataATATATATACCATATAATCTATGTTTGAACCAGCAAGAAACG
ACCCAGAAAGCTCTGTCAcctgacaaagaaaaaaatactgtTAAGATCAA
TTAGGGAGCTTATTTCTTGCAAAAATTATGGACCGCTTCCCTAAAAAACT
TCCTCTTTGAATTCCCTTTCTCTGTTTTCAGTTATGTTACTATGACGCCT
TGGGTCAACAATTTAGATGGTTTTAGAACATTTAGGGTATTGAGAGCATT
GAAAACTATATCAACAGTTAAAGGTGAGTAAGGCCTGTATTCTGTATGGT
TCACAGCTCTAAGCCTTCAACATCACAAACTAAATGTGATCCAGTTAAAA
ATGATAATGTTAATTTCATATGCAACCGACTTGCGATATTTCAAATTAAC
TCAAATTAACAACATAAGAATATCAACCGAACTAGATTTAAAATGAGACT
CATTGTACAATGggactttgatatcattcttcTCATCGTCGCTTTGTAAT
ACGTTCTGAAATGAAAGAAGTCAGCCAGTCAGTTAAAAACAGCAACCGTC
ATATTCCCCATTACTAGTCCATGTTCTTATTAAACTGTTCCTATTCAACT
GTTCTCGCGCAAAAAGTCagtgtatttaaaaaaataaatattttagagTA
ATACCTACAGCGCTATTAAATTCGAACCTTTCtgcaattcgaactaaaat
attgatccCTCCCGCTGGAAAGTGTTAAATttgtctctgtaattcgaatc
cgTCTATTCTAATTCGAGGgctttttggtcccttgaataTCGAATGAGGC
AACTATACACTAATTCGAGTTTtacttgaagatcgaattagagagagaaa
gTCTATATCAGTTTCtttataatcttttttccaGGTTTAAAAGCGATGGT
GAATACATTACTGAAGTCCATGAAAATGATGACGGATGTGATCATTCTAA
CATTGTTCTTTATC Coding sequence (CDS) from alignment at sc0000296_pilon:149241..152704+ >XLOC_036339 ID=XLOC_036339|Name=XLOC_036339|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=762bp|location=Sequence derived from alignment at sc0000296_pilon:149241..152704+ (Clytia hemisphaerica_ch_hm2_pilon)
TATTTCGAAATATTTATTCTTTTAACTATAGCAGTAAATTGTGTTTTCAT
GGCATTATCAGATCCTCCAGAGCTTATGGATATTTCGAAATATTTATTCT
TTTAACTATAGCAGTAAATTGTGTTTTCATGGCATTATCAGATCCTCCAG
AGCTTATGGAATTCATATTTGCCGCAATCTACACGTTAGAAAtgataatc
aaaattttagccaaaggTTTTGTTATGCACAAATATTCTTATTTACGGAA
CTCCTGGAATTGGTTAGATTTCGTTGTAGTTGTTTTAGGATTCATATTTG
CCGCAATCTACACGTTAGAAAtgataatcaaaattttagccaaaggTTTT
GTTATGCACAAATATTCTTATTTACGGAACTCCTGGAATTGGTTAGATTT
CGTTGTAGTTGTTTTAGGTTATGTTACTATGACGCCTTGGGTCAACAATT
TAGATGGTTTTAGAACATTTAGGGTATTGAGAGCATTGAAAACTATATCA
ACAGTTAAAGTTATGTTACTATGACGCCTTGGGTCAACAATTTAGATGGT
TTTAGAACATTTAGGGTATTGAGAGCATTGAAAACTATATCAACAGTTAA
AGGTTTAAAAGCGATGGTGAATACATTACTGAAGTCCATGAAAATGATGA
CGGATGTGATCATTCTAACATTGTTCTTTATCGTTTAAAAGCGATGGTGA
ATACATTACTGAAGTCCATGAAAATGATGACGGATGTGATCATTCTAACA
TTGTTCTTTATC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000296_pilon | genome | sc0000296_pilon:149241..152704 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 304-381:3387 |
| Aaloc | 211-300:2683 |
| Aaloc | 82-207:407 |
| Aaloc | 1-78:1 |
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