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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000296_pilon:37367..44085- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_036335 ID=XLOC_036335|Name=XLOC_036335|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6719bp|location=Sequence derived from alignment at sc0000296_pilon:37367..44085- (Clytia hemisphaerica_ch_hm2_pilon)
ATGATGGTGATGAAAATTATTTTCAGTTCAGTAATTCTGGTGACTTTTCT
CACTGTAAAAGGTATGTTAAAAAAAGCCAATAACTCTTCTTACGTTTTAA
GACTTAATTAATCTCATAACAGATCATCCATTCTGCGCATACCAACTTCT
GCTCTAAAGGGAAATGGCGAATGTGACCACGGCTGTTCAGCTGTAACATT
CAAAACCACGTTTTCTTTTACTTGAAAAACTAAAGCGAAAGCGACTGGGT
TCTATTGCTTATGTTTATAATACACCTTTTCGACCGTAGCCGCCAATTAC
CGTGCGGGCATTTTTTTGTCCCAGACTTTTTTTCGCACCAATAGACAATA
AAAAAAAGGTGTAAAAAAAGGATTGGATCGAGTTTAGGCGCCTGACCGCG
CGAATACGGTCAAAAAAGGTGTATTGGTGCTTGTTTTGGTGCAAAAGTTT
TGCATTAGCCAATCACCTCACTCAAAAGATCACTTAATATTCATCCCAAT
TCTGGATGAAAAAAGATTAAGGCGTTGCGTCAATCTGGGCAGATTCTCTT
ACGGAGCCATGGCCTTTAGTGTGTATACGTAGCAGCACGGAGTAATCAGG
ATCTTCTCGAAGATTAGGACGTCAATATCGTTAAATGTGGTTCTTTTGAC
AATTTATTTGGGACACACTCATTTTATGAAAAGTGCAACTCACTTTACGA
TTCCCTTACGTCTTTTAAGAGTTCGTGACAAAAGTGCATTTCTTTTTAAT
TTTGCCATAGTCCCATAGTCCGTATAAAAAAACCTTGGTCTGGAGGCCTA
TTATTTTAAGATAGAAATAGATTTGCTCAGGTTTTGACCACTTTACCAAG
TCCTCCTTTTTGGATTGGTTTAAGATTTAATCACATGATCAGAAAATGAG
CAAAACAAGCCAATTTCTCAAATTATTATTTTGCATATATTTTAGCTCAA
AATGACGGAGGTTTTTTTAATATTGCACACATGTGCAACAATATCGATAC
GTTGGATTGGGCAGTTAGAGAAGGTGCAAACGCTATCGAGGCTGACTTAC
AATTTGATGACCAAGGCAATCCAAAGAGATTCTACCATGGAGCTCCATGT
GATTGTAATTGCATGTGCAATTTGTAAGTCTATACGGAACAATCACCAAA
CTTCAACCAAGTCCCTTAAGGACTGTTCATATATGGAGATGGGATGGCCC
GGTTAGGTGAGGTGGGGTAGATTTTCAAACGTCACGTGATATGTTTTTAG
CCATTTGATTCGTCGAAAACTGTGACGTAGCGCTCGAAAATCCATCCCGT
CTCACCTAGCCGGGCCAACTCACCACCATATAAAAAGCCCCTTAGTACAA
GCCCTTCTCACAGACCCGGTAAGATTTTTTCAGCCTGTTGGAGTAACATT
AACGGACTGAAACTCAATTGCTATTCCAATGTTGTTTCCTCGTTTTAATT
GTGGATTTGAATTCCATTGTTTTTAAGTCAGAATATTCAGTTGTATTGAA
AAAATGGGACAATATTTTGCCGAGGGGTAAATCACTCGAAAGATTATGTT
CGAGATTTATTTTTGATTTATTATTGATTTATGATTTATTTTTGATTTAT
TTTTAAGTTGTTTGTTTGAGATTTTTTTAGTGATTTTCCCCTGGTATTTT
GCAGTGAAGATTTTTTTATTTGATCATTTTCAGTGGAGACAAAAATTGGA
GTATGATCATAGTGTCCCCCCCTTTTTTAAAGGGGAGGGGACCAATTTTC
CGATTTTGGATGGGTGAGGGGGGAAATGAAAATTTGAATAGTAAGGGGGG
GGGAGAGGGGGGGAAACATCGATAGTTGGCAAATTTGGTTGGGGGAGTGT
GAAATCACTTCAACTTTATCTCAGCAACCAAGGTCAGTCCACATGATATC
ATGTGATTAGTTCATGATTGAAAAATTCACTAGGCATAAAAACTGTACAG
AAACATTTTCGTTCTATTTTGTCTAGCATTCCTTTTGCAGCAAAATCTTA
CGTTTGTGTCAGGTTGAAATTTGAGAGATTTATATGGGTATATGGGGGGG
GGTCTTTCTGAAGAAGAATTTTCTGGGGGGAAAGCAAAAAAGAAGGGGAA
ACTAAAAAACTGAAAAGTCATACGGGGAAAAAAAGAGTGGGGAGATTTAA
AAAAATCAAGATTTGGTGGGGGGAACAAACCCTGGAGGACACTATGATGA
TTTTCCACTGGCGACTATATTTTGGTCAATTTTCCAATTGGAATTGGTCC
CACTGGGTCTGTGAGAAGGGGGTGTCTTAGTTCACTTTTTATGAGTTCAT
GAAAGTCTTGTTTCAGCAGTCCATTAGTCAATTAGAATGTGGTACAAGTG
GCTATGGCTAGGAGATTGGGCAGCTCTCTCTAAGGGGGACAAAAAACCAA
ACCAATCTCTAGAAAATATGGTCACAAAAGCACAAAAAATAAGAATCTTT
TAAGATTTTTGAATATATGGACCAATTATTGATGGGAACTTCTGAAGGGC
CAAAAACACTTTTTTGTAAGATATCTTCAAGACAGTATCAGGGATTTGAA
TTTGTTGTGGTTCAGATTTTTGATAAGGTTGATTATTTTATCCAGCTTTT
TTATATGTCTTTTCAGCCATCTAACTTGTTATTGGTTTCGGCCACACACA
GTTTGTTATCCATTGAGTACAAATGTCAAGAATTGCGACGCAGAGGCCGA
TGTTACATTATGGATGAGAAGAGCAGGTGAAAACAATTTGAAAAACTTCT
CCAAGAGCTGACTCGGATAGGCTGCACGCATCCCCTCTGATATGTTTTGT
TATAGGGGATGGGTATTGTGCATAAAATTCCCGTCCGAGAGTTATGCGTC
CTCTATATCAAAACATATCAGAGGGGATGCGTGCAACCTATGACTCAGAT
TGAAAAGAACCGTAGAAGTTGGCCCTTAACTGTGTAAAGATTTAGCTGAA
TTTGAACACAAAGTCAACTGTTTGAAAATGTTGCCTAAAAACATCTTCTT
GTTCTCGCATCCTTACAGTGTACCGTTATTCCAACCTCGTTCTCATGCAT
TATCTCTTTTTTTATTAATTAGGATTAGCCCTGGACTTGGCTGGGTTTTC
ATCGTCTGTCTGAGGTGATTATCGAAAAAGATTAAGTAATGTTTGAACAT
TATGTTTACTACCTCTTTCGAGAGTATTGATCACTTTTTCTTTTTATTCA
TTTTCAGCCACAAAATATTCGTCAAAAATTGCTTTGATTTGGTTGGACAG
CAAAGTCAAAGGGAAAGGTTATTCTGAAGAAACACTCAGAGATGCTGCCC
GTAATGTAAATACTGTACCTAGATTTTTTATTTTTAACATACAATCGACT
CTTGCTAATCCAAACTACTATTCTTCGAATTTTTTTTTATGATTCGAACT
ACTTCTCAGTCCCCATCAAGGGTAAAAGATATCCTTTACAATTCGAAAAG
CATTTTTTTGGCAAATGCCAAAAGGGGGGGGGGGATTAGATGCGAATGGG
AAAATCTCTAGGTGGGGGCATACTTTATGCATTTTTTAGCAAAACAGTGT
AAAAACATACCTTTTTCAGAGAAATCACTCAATTTTGTATCCAAAAATGT
CATCTTTTAGACACAAAACGCATGAAATTGAGGACTTTGAGGATTGAAAA
ATTTTTCCGAAAAGGGGGACAAAGAGGTTTTTCAAAATCTAGGAGGCGGA
TTTAAAAGGGAGGCAACCAACCCACTAAGACACTATTTAAAAGAACACTA
GGACACTTCTAGGACACTACAAAATTTAGACTCCCCTTCCGAGTTCGAAT
AGGCTAGGGTAAACTATAATTTCAGACACGAAGAAGTGTTGATTGATCTT
CGAAGGTAATTTCATAAAAATCATCCATTCTTCCAACAACATACCATCCT
AAAATTCGAAATTAATAAATAATCCTTTTGTATAGTAAAGAAAACGAGTT
AGATAAATTTCATACAGGGTGGCAATCTTTGGTGAAAGAATTACCTTAAG
GGAAGACATTTTGGCGGAAAGAAACTTAAATTCATAGGCCCATGAAACTC
GTAGGCCATTAAATAAATTCTCGCCAAATTTAATTTTCTTTCAATCTAGT
CTCTATTTCTCCTAAAAGCCCTTTTTTTCTCTTTTTTCAGCTAAAATATT
AAACAAAAATGGGTTCGTTCGCCAAAATTAATTCTCGCCAAATTTAGAAA
TTTTATTAAATCGCCAAAATAAATATCGCAAAATTGCACCCTAATTGGCG
AATGGGTTCATTCGCAAACATTTCTTCTCGCCAAAATTTCTTCTCTTAAT
AGGCCGTTAGGGCCATTCTTTTAGGACCCGTGACAACAATTTCCGGAGTG
GAATTTTTTTGTTCATTCGAAAGAAGAATGTATTTAGAAACTTTTTTGAG
AAGGAGTAAATTAATTAGGTCCGGCAATTTTTTTTTATGGGGAAAAGACT
GACGTCACAAGCAAAAACCCTCGGGACCCGAAATTTGACGAAATTTCAAA
GTCGCTAAAACACAAAACCACATAGAGGACTTTAAAGCGTACATGGTCGA
TTTCTCAACGTAACTAAATTGCTAAATTGCTTGTGACGTCAGTCTTTTCC
CCATAAAAAATTGATGGACCTAATTAAATTACCCCCTCTCAAAAAAGTTT
CTAAATACATTCTTCTTTCAAATGAGCAAAAATAATTCCACTCCGGAAAT
TGTTGTCACGGGTCCTAAAGAAGGGGGCCATACTATAAGGTAGTAACTAC
AGTTTATTTAAAGTTTTTTTTAAATTTGACGTTTGACCTTCATGATATGC
GTGACTGTCATGGGGTCTTGTTAAGGGTTCTGACCATCTGGGACGAGATT
ATGGAGCTTTTACAAGCTCTCATTTGATTTGGTTAGTCGTTACCAGTAAT
AAAACAATTTTGTTACTTTTTCTAAAGAACGCATCATTTTCATTACTTCA
AATCACCAATTATTAAAGTATCTTATAAAAACTCCATCTCCTCTGGACCA
TCTCAGCTTGTTCTTCGACTAATCTCTAAACCCCTCTTTTGTAGCTTATC
AACGTGTTAGAGGACAACTTATTCAGTCTTGGTTATAAGGGTGTAGTGTT
GATCGGTGCAGAGGGTCATGAAATTGCATCTTACTTCAATGAGGTTTCCA
AGACCACAAGTACCTTTAAAGATCGAATTTACGTCACAATGGATAGTGTT
ACAATGAAAACGGCTCGAAACAATTTGGACTTTACCAATTTCAAAAACAT
CATTTATAACAACGGAATGACTGGTTGTTCACCGAGAAAAATCAAAAGTG
ACTTATTGACAGCTATCAAGGACAATGTTGATAAAGGTATTAAAGATTTC
GATCATCACTTATCATTTAAAGTATTCTTTTTGGAAGCAAAAGCTTTAAA
CTCCCTATCACTTTCTCTTAGACCCGGTAGGATTTTTCCATCCAGTGGGG
GTCAAAATAACGCACCAAAACTCGGATTGATATTCCAATGTTTTTTATGG
CTGGAGATTTTAATTCCATTGTTTTCGAACCAGAAAATTCAGTAGGGATG
GAAAAAATAGCACAATATTTTGCAGTGAGGATGTCTTTATCTTATTATTT
TCAACAGGGACAAAAATTAAAGCATAATTTTTCCCTGTGGACGATATTTC
GGCAACTTTTTCCAGTGGGAAGGGGTCCCAGATGGTGTGTGAGAAGGGGT
TTTTTCTATTATTTCTTTACTTATTATCTGCTATTCCTAGCATGCTAGGT
CACTGTAAGCCAAAACTTCTACAAGTACTTTTACATACTGTGAAAATCAC
ATGCCGAAATTATATTCTGACCTGTGAGGACGAATAGCAATTCTATTTAG
CGCGCAATAGAAATGTAACCATGACGACAATCCAAGATCTTGATGATATT
TTTATTTCAATTACACTTGGGAAATTTGTCAATACTAAACATGCAAATGG
TAATATTTGCTCTTCATCTTTGATTCGTTCTACAGTCATAAAATTTCTAC
ATTGGTCGCCAGAGGTTGATATGTTCGTTGAAAACTCAACCTCTGATACT
CAGGGTAGTACTTGTACTTTTGTAATTCCAGGAGTGTTCAGTGCAGCCTT
TACATGGACTTACAATTTGAAGAGATCCATGAGAAGAGTGGCTCCTTATT
TCAATGGCATCATAACCAATAGTCCACCGTATCTCAACAAAGTTGTCAAA
GAAAAAGGTTCGTTGATTTTTCGGCATATCCTCATCAAAGAATCTAGTTT
TTGTAGAAAGTGTTATATAACTGTTTGAGTACTGCCAAGCTAAATTTCCA
TCATTTATGAACGATACTTTCGATACGATACAAGACCTATTTTGCTTCAG
ACAAAGCCGAGAAAACTACGTTTGAAGTTGACGCACCGTAATTTAAAAAA
AGCCTTAAATTTCACTTTCACACAGTTCTTCAGGAGTTAAGCAAAACTTT
CCATTGATTTCACATATCCCTGGTTTCAGTGACACATTGGGGGCGACAAA
CAATGAAATACGATTTCATTGGGTCTGATTTTTAGATACAGGGGTGTAAA
AGCAGTCAAACAGATCATTTCCCTTTTTATTTTGTTCCACCCAGGTCTCC
GTTTGGCAGTACCAGGTGAACGTTTACCAGAAGCGACAAGTTCGATTGTT
GAAGACGTTCCAGATGATGAAATGTATGACTCTGAAGAAGATTTGACCAA
TGATAGTGAAGAGCTCTAA Coding sequence (CDS) from alignment at sc0000296_pilon:37367..44085- >XLOC_036335 ID=XLOC_036335|Name=XLOC_036335|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1980bp|location=Sequence derived from alignment at sc0000296_pilon:37367..44085- (Clytia hemisphaerica_ch_hm2_pilon)
ATGATGGTGATGAAAATTATTTTCAGTTCAGTAATTCTGGTGACTTTTCT
CACTGTAAAAGATGATGGTGATGAAAATTATTTTCAGTTCAGTAATTCTG
GTGACTTTTCTCACTGTAAAAGCTCAAAATGACGGAGGTTTTTTTAATAT
TGCACACATGTGCAACAATATCGATACGTTGGATTGGGCAGTTAGAGAAG
GTGCAAACGCTATCGAGGCTGACTTACAATTTGATGACCAAGGCAATCCA
AAGAGATTCTACCATGGAGCTCCATGTGATTGTAATTGCATGTGCAATTT
CTCAAAATGACGGAGGTTTTTTTAATATTGCACACATGTGCAACAATATC
GATACGTTGGATTGGGCAGTTAGAGAAGGTGCAAACGCTATCGAGGCTGA
CTTACAATTTGATGACCAAGGCAATCCAAAGAGATTCTACCATGGAGCTC
CATGTGATTGTAATTGCATGTGCAATTTCCATCTAACTTGTTATTGGTTT
CGGCCACACACAGTTTGTTATCCATTGAGTACAAATGTCAAGAATTGCGA
CGCAGAGGCCGATGTTACATTATGGATGAGAAGAGCAGCCATCTAACTTG
TTATTGGTTTCGGCCACACACAGTTTGTTATCCATTGAGTACAAATGTCA
AGAATTGCGACGCAGAGGCCGATGTTACATTATGGATGAGAAGAGCAGCC
ACAAAATATTCGTCAAAAATTGCTTTGATTTGGTTGGACAGCAAAGTCAA
AGGGAAAGGTTATTCTGAAGAAACACTCAGAGATGCTGCCCGTAATCCAC
AAAATATTCGTCAAAAATTGCTTTGATTTGGTTGGACAGCAAAGTCAAAG
GGAAAGGTTATTCTGAAGAAACACTCAGAGATGCTGCCCGTAATCTTATC
AACGTGTTAGAGGACAACTTATTCAGTCTTGGTTATAAGGGTGTAGTGTT
GATCGGTGCAGAGGGTCATGAAATTGCATCTTACTTCAATGAGGTTTCCA
AGACCACAAGTACCTTTAAAGATCGAATTTACGTCACAATGGATAGTGTT
ACAATGAAAACGGCTCGAAACAATTTGGACTTTACCAATTTCAAAAACAT
CATTTATAACAACGGAATGACTGGTTGTTCACCGAGAAAAATCAAAAGTG
ACTTATTGACAGCTATCAAGGACAATGTTGATAAAGCTTATCAACGTGTT
AGAGGACAACTTATTCAGTCTTGGTTATAAGGGTGTAGTGTTGATCGGTG
CAGAGGGTCATGAAATTGCATCTTACTTCAATGAGGTTTCCAAGACCACA
AGTACCTTTAAAGATCGAATTTACGTCACAATGGATAGTGTTACAATGAA
AACGGCTCGAAACAATTTGGACTTTACCAATTTCAAAAACATCATTTATA
ACAACGGAATGACTGGTTGTTCACCGAGAAAAATCAAAAGTGACTTATTG
ACAGCTATCAAGGACAATGTTGATAAAGGAGTGTTCAGTGCAGCCTTTAC
ATGGACTTACAATTTGAAGAGATCCATGAGAAGAGTGGCTCCTTATTTCA
ATGGCATCATAACCAATAGTCCACCGTATCTCAACAAAGTTGTCAAAGAA
AAAGGAGTGTTCAGTGCAGCCTTTACATGGACTTACAATTTGAAGAGATC
CATGAGAAGAGTGGCTCCTTATTTCAATGGCATCATAACCAATAGTCCAC
CGTATCTCAACAAAGTTGTCAAAGAAAAAGGTCTCCGTTTGGCAGTACCA
GGTGAACGTTTACCAGAAGCGACAAGTTCGATTGTTGAAGACGTTCCAGA
TGATGAAATGTATGACTCTGAAGAAGATTTGACCAATGATAGTGAAGAGC
TCTAAGTCTCCGTTTGGCAGTACCAGGTGAACGTTTACCAGAAGCGACAA
GTTCGATTGTTGAAGACGTTCCAGATGATGAAATGTATGACTCTGAAGAA
GATTTGACCAATGATAGTGAAGAGCTCTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000296_pilon | genome | sc0000296_pilon:37367..44085 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 868-990:124 |
| Aaloc | 742-864:637 |
| Aaloc | 448-738:1676 |
| Aaloc | 352-447:3511 |
| Aaloc | 241-348:4103 |
| Aaloc | 64-237:5773 |
| Aaloc | 1-60:6720 |
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