|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000001_pilon:4414921..4416520- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_036326 ID=XLOC_036326|Name=XLOC_036326|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1600bp|location=Sequence derived from alignment at sc0000001_pilon:4414921..4416520- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCAAAGACCAAACAACCATCACCCAAGAAGATATCATTTCCCAAGCCT
CCATAACCTATTTCCACACTCTCATCACTGGCATCACCGTAAACCGGAAA
ATTCAATCAGAAAATCAATCATCCAGGAACACACCAACACCTACAACAAC
ACCCTAATACACAACCTTTCCACCTACCAACTCTCAAAATATGAAATCGA
CGTCTTGGCCAAAGGACTTAACTTCTCACCAAATATTCCATCATTCAAAA
GACAGTCAAATCCAACAGAGGTTATTAAAGACTTGAAAAGAAGAATTGAC
ACCTCCCTATACTTCAACCAACTTAACCCAATGAACCAAATCAATAACGC
CCACCAAGAAAACCAAGACCGGCAACCACCTGCAAAACTACCAAAAAAAG
GTCCTACCGCATGGAATCCCCCTCCCAGCAACCACCCAACTGTCAACAAC
TTTTTCCAACAACTCGATAATACGCCACTGGTCCCATTCGAACAAGACCT
CCAAACTGAGCACTACCATTTCCTCCCATCTTTTTTTAAATTAAAAAATA
ACCGGGACCTCATAATAAAGAAAGCCGACAAAAGTGGTGGCATTGTCGTC
ATGGATAAAGATCAATACATCAACAAGATCCTTGAAGAGCACCTCAACGA
CAGAAACACGTATCGTATATCTGATTTCGACCCAACACCCCACATCACAC
ACGATACCAAAATACTTATCAACTTCCTTCATAGTAAACATCACATCAAC
GACCACACTGCTAAATATCTCAAACCTCATGATCCACCACGCACACCCAT
ATTCTATGGCTTACCAAAAATACATAAGGTTAACAACCCACTTCGCCCCA
TTGTCTCTGGCTTTGATGGTCCCACCGACAACATTTCCCGCTACATTGCC
CATCATCTACAGCCACTTGTTGAACACCTACCCTCACACATAAAAAACAC
AAAACATATGCTCACTATCCTCGATTCATTCGGCCCACCACCTCCCAATA
TCACCATGGTTACTGCAGACGTCATCTCGTTATATACTAACATACCTCAT
GGGGATGGACTGGAAGCCACCTCCCGACATTACAAACAATCTCCGCACCT
GCTTCACTCAAATGCACCTCCCCCTTTTGCCATCAAAGTACTACTCGAAC
ACGTCTTGAAACACAGCAATTTCCGGTTTTTGAATTCCCACTACATACAA
AACAATGGTACCAGCATGGGAGGACGATACGCACCCCAATATGCAAATTT
ATTCATGGCTGATGTTGAAGCAGCAATACTCATGGAGTTCCAACAATACA
TCCCACTCTGGAAACGTTTTATTGATGATGTATTTTTTCTTTTCATTGGG
TCAGATGAAGACTTAAACCGTCTCAAACAATTCATGAACATAATCCATGA
CACAATAAAATTTACATTTGAACATTCCAAAGAAAGAATCAACTTCCTAG
ACCTCTCAATCTCTATCTCTAACCATCAGTTCCACACTTCTATATACAGA
AAACCCACGGACCGCTCCCAATTCCTTCACTTTCAATCAAATCACCCCCT
ACATGTCAAAGAAGGAATCATATACTCACAAGGACTACGATACAACCTCA
Coding sequence (CDS) from alignment at sc0000001_pilon:4414921..4416520- >XLOC_036326 ID=XLOC_036326|Name=XLOC_036326|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3200bp|location=Sequence derived from alignment at sc0000001_pilon:4414921..4416520- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCAAAGACCAAACAACCATCACCCAAGAAGATATCATTTCCCAAGCCT
CCATAACCTATTTCCACACTCTCATCACTGGCATCACCGTAAACCGGAAA
ATTCAATCAGAAAATCAATCATCCAGGAACACACCAACACCTACAACAAC
ACCCTAATACACAACCTTTCCACCTACCAACTCTCAAAATATGAAATCGA
CGTCTTGGCCAAAGGACTTAACTTCTCACCAAATATTCCATCATTCAAAA
GACAGTCAAATCCAACAGAGGTTATTAAAGACTTGAAAAGAAGAATTGAC
ACCTCCCTATACTTCAACCAACTTAACCCAATGAACCAAATCAATAACGC
CCACCAAGAAAACCAAGACCGGCAACCACCTGCAAAACTACCAAAAAAAG
GTCCTACCGCATGGAATCCCCCTCCCAGCAACCACCCAACTGTCAACAAC
TTTTTCCAACAACTCGATAATACGCCACTGGTCCCATTCGAACAAGACCT
CCAAACTGAGCACTACCATTTCCTCCCATCTTTTTTTAAATTAAAAAATA
ACCGGGACCTCATAATAAAGAAAGCCGACAAAAGTGGTGGCATTGTCGTC
ATGGATAAAGATCAATACATCAACAAGATCCTTGAAGAGCACCTCAACGA
CAGAAACACGTATCGTATATCTGATTTCGACCCAACACCCCACATCACAC
ACGATACCAAAATACTTATCAACTTCCTTCATAGTAAACATCACATCAAC
GACCACACTGCTAAATATCTCAAACCTCATGATCCACCACGCACACCCAT
ATTCTATGGCTTACCAAAAATACATAAGGTTAACAACCCACTTCGCCCCA
TTGTCTCTGGCTTTGATGGTCCCACCGACAACATTTCCCGCTACATTGCC
CATCATCTACAGCCACTTGTTGAACACCTACCCTCACACATAAAAAACAC
AAAACATATGCTCACTATCCTCGATTCATTCGGCCCACCACCTCCCAATA
TCACCATGGTTACTGCAGACGTCATCTCGTTATATACTAACATACCTCAT
GGGGATGGACTGGAAGCCACCTCCCGACATTACAAACAATCTCCGCACCT
GCTTCACTCAAATGCACCTCCCCCTTTTGCCATCAAAGTACTACTCGAAC
ACGTCTTGAAACACAGCAATTTCCGGTTTTTGAATTCCCACTACATACAA
AACAATGGTACCAGCATGGGAGGACGATACGCACCCCAATATGCAAATTT
ATTCATGGCTGATGTTGAAGCAGCAATACTCATGGAGTTCCAACAATACA
TCCCACTCTGGAAACGTTTTATTGATGATGTATTTTTTCTTTTCATTGGG
TCAGATGAAGACTTAAACCGTCTCAAACAATTCATGAACATAATCCATGA
CACAATAAAATTTACATTTGAACATTCCAAAGAAAGAATCAACTTCCTAG
ACCTCTCAATCTCTATCTCTAACCATCAGTTCCACACTTCTATATACAGA
AAACCCACGGACCGCTCCCAATTCCTTCACTTTCAATCAAATCACCCCCT
ACATGTCAAAGAAGGAATCATATACTCACAAGGACTACGATACAACCTCA
ATGCAAAGACCAAACAACCATCACCCAAGAAGATATCATTTCCCAAGCCT
CCATAACCTATTTCCACACTCTCATCACTGGCATCACCGTAAACCGGAAA
ATTCAATCAGAAAATCAATCATCCAGGAACACACCAACACCTACAACAAC
ACCCTAATACACAACCTTTCCACCTACCAACTCTCAAAATATGAAATCGA
CGTCTTGGCCAAAGGACTTAACTTCTCACCAAATATTCCATCATTCAAAA
GACAGTCAAATCCAACAGAGGTTATTAAAGACTTGAAAAGAAGAATTGAC
ACCTCCCTATACTTCAACCAACTTAACCCAATGAACCAAATCAATAACGC
CCACCAAGAAAACCAAGACCGGCAACCACCTGCAAAACTACCAAAAAAAG
GTCCTACCGCATGGAATCCCCCTCCCAGCAACCACCCAACTGTCAACAAC
TTTTTCCAACAACTCGATAATACGCCACTGGTCCCATTCGAACAAGACCT
CCAAACTGAGCACTACCATTTCCTCCCATCTTTTTTTAAATTAAAAAATA
ACCGGGACCTCATAATAAAGAAAGCCGACAAAAGTGGTGGCATTGTCGTC
ATGGATAAAGATCAATACATCAACAAGATCCTTGAAGAGCACCTCAACGA
CAGAAACACGTATCGTATATCTGATTTCGACCCAACACCCCACATCACAC
ACGATACCAAAATACTTATCAACTTCCTTCATAGTAAACATCACATCAAC
GACCACACTGCTAAATATCTCAAACCTCATGATCCACCACGCACACCCAT
ATTCTATGGCTTACCAAAAATACATAAGGTTAACAACCCACTTCGCCCCA
TTGTCTCTGGCTTTGATGGTCCCACCGACAACATTTCCCGCTACATTGCC
CATCATCTACAGCCACTTGTTGAACACCTACCCTCACACATAAAAAACAC
AAAACATATGCTCACTATCCTCGATTCATTCGGCCCACCACCTCCCAATA
TCACCATGGTTACTGCAGACGTCATCTCGTTATATACTAACATACCTCAT
GGGGATGGACTGGAAGCCACCTCCCGACATTACAAACAATCTCCGCACCT
GCTTCACTCAAATGCACCTCCCCCTTTTGCCATCAAAGTACTACTCGAAC
ACGTCTTGAAACACAGCAATTTCCGGTTTTTGAATTCCCACTACATACAA
AACAATGGTACCAGCATGGGAGGACGATACGCACCCCAATATGCAAATTT
ATTCATGGCTGATGTTGAAGCAGCAATACTCATGGAGTTCCAACAATACA
TCCCACTCTGGAAACGTTTTATTGATGATGTATTTTTTCTTTTCATTGGG
TCAGATGAAGACTTAAACCGTCTCAAACAATTCATGAACATAATCCATGA
CACAATAAAATTTACATTTGAACATTCCAAAGAAAGAATCAACTTCCTAG
ACCTCTCAATCTCTATCTCTAACCATCAGTTCCACACTTCTATATACAGA
AAACCCACGGACCGCTCCCAATTCCTTCACTTTCAATCAAATCACCCCCT
ACATGTCAAAGAAGGAATCATATACTCACAAGGACTACGATACAACCTCA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000001_pilon | genome | sc0000001_pilon:4414921..4416520 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1456-1593:139 |
| Aaloc | 1132-1455:464 |
| Aaloc | 931-1131:666 |
| Aaloc | 847-930:754 |
| Aaloc | 1-846:1601 |
|
