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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000131_pilon:44813..53500+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_036306 ID=XLOC_036306|Name=XLOC_036306|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=8688bp|location=Sequence derived from alignment at sc0000131_pilon:44813..53500+ (Clytia hemisphaerica_ch_hm2_pilon)
aGTTTTTTCGGCTTCGGACAATCTGCAGAAATCTCCATTGAACTATCAGA
TTCAGATAAAAGAAAACAGGTGGAATTAAAGAATGAAGATGATAGAAggg
aaaaacattttcttttttatgatggtgAAACTGTAGCAGGGACTGTGAGT
AGAAGTTCTTATGATCTACATGAATTTTAGAGAGGTGGTCAGATCAAGTC
AGGGTTAGGGTTCTGAGATTGCATTTCAACTGAACCTCCCCCCAAGTCTT
TTGTATTTTCTGCAAATAAATTTCCCATCCTAATATAGCTGAATTAAGCC
GTATAAACTATTGacccatttttttcattttgatattcCTTCAAATCAGA
GTGCATGCTATTCTTTCAGAGTTAAATTTTCGTACTGAGCTAACCTGGTA
GCAAGTAAGATTTCAGAAAAGTatccttaaaatgttttcatttgtaTTAG
CAATGACTGCAAACCAGTTTAAATCGCTCACTTGAGTTGCCTGTTTTGTG
TTGTCCATATCCTTCTAACGTCTTGTCAAATGAAAGACCTCATGCAACAG
ACAAATAGGAGTAACACTCATGCCATTCTGCCTATTTTATCTCAGGTAAA
TATCAAACTGAAGAATCCTGGCAAAAAGTTGGAACATTATGGAATTAAAG
TCGAATTCATTGGACAAATCGGTAAGGAAGATTTCTTTGTCTTTACATAT
TTTCTAATTGACGACATTTGCCAGAACTCTCTAtgcttttttaaaggaaa
atttgggtattgtGTATTTTTCACAAGTCTACTTCAATTTCAATCCAGGT
ACTTTTCTTTTACCAAGAAAATTTCGTTAGCattgtgtttttgtcaaaaa
gaatGCTGAGAGGAAACATAATGTCAGCCCctccagaaatctgaagggca
tcTAGGCCAGGTTAGGGGTCGGGGGCTAATATTTTGcgattctttggggt
tacctattcattggGGGTAGCTGTCTTGATTGAGGCTCTGGGGGCTGTGT
ATATTTTCCAagttgaatatttcaaaatatatcaaattattagaattttt
taccccagcacccAGTTTCCCAATCAATTTTGATtctctttcttttgttt
cccaTCATGTCATCTTTCCCTATATATTTCaaatgtgattgttttgattt
acagccgtTATCTTTAGCATAAACAAAGCATCGCTTCCCACGCTAGCATA
GAGAAGCTAAAACCTCAGGATTGGGAAatggggtacctaactcaaagcaa
tttctcaaggggacctaactcgttgggggcaccatgcttcaATGAGGGCA
CCTGGAAaatgggctgaaaccatgagaAAAGGGCTTAGGACTTCCTCTGA
CAGTTCCCTATGCCAAGTCATtgctttcttcttataaaagacACTTGATT
TAAGACTCTTAAAGTGCTTTTAAGTGAGCGACTTTACTAGAAGGCAACTA
AATTATCCTCTTCTGATAGCTGTCTGGCTTGAAAACAAGCGAAGgtttac
tctcttttttcaaTTACTATATCTTGACTTTCTCTTGAATCAATTGCTCA
AGAGCACTAAGCAAAGAGATATGAAACGTACTCTTTTTCAAGTTCTTGTT
AAGACTCGGTCAGGGATTGAAGGTAAGAACTTGTGCACAAGAGGTCAATG
CTACTGCAGCGTAAAACATTCTGtctcaatattcaattttctttttcaga
attaTTTTACGACAGAGGGAACCACCATGAATTCACATCACTGGTCAAAG
AACTCGTCAAACCCGGAGAAATGACCACCAACGGGTCttataaatttgaa
tttgtAAACGTCGAAAAACCTTATGAATCATATACTGGCAAGGACGTCAG
GTTAAGGTAGGTTTTTTATGTTTGGGATTCAACATGTTTTACTAACTAAT
TTGTCAAAGTATCGGCAGGGAGCCCTGATATAATTTTGCTCcagatttaa
ataaaatattctGCTGAAGTGAAACATTTTCCCAGTATCTTaaactaaat
tttttgttctgctttttttgtatgaagaattaaaaaaaatcattcagcCT
GTATTGGTTTAAAGTCATGTTAATCACACACTGGACTGCACTGAAAATGA
TGCTGTAAGGTTAAGAAACTTTAAACCCATAAATTAGAGCAGAATATAGC
TTGCACCATAACTAAGACTTGATTCTCCATGATTTCGTATCTCACTTTGA
GACTCTTTGGTTTCAGCTAAAAGCTTCGGCCGGGAAGCTCAGTaagtaga
gcattcgccttgcAAACAAAGGGTTATGGATTCGATCCTCGGTTACCGCC
AACTCAGCGATTGAGTAGCATAGATTAGGTTAAGTAACTGAGAACCTCAG
CATCAAATTTCCCAGGAGCAAATAGAAAGGGATTAGACGCCCTCACTTCC
GGCTCTGCCGACTGCCACCAGATGAGTATACTTCCTTGCTTACTTTAAGC
AAAGTAGTATGACGTAATCTCTTCAAAGAAATGGCATGGTCTATTAGATC
ATCTTTTGAAATCTACGTATTAACACAGACTATTCATTTCTTTCATAGGT
ACTTCTTGAGAGTGACTATTGTACGGAGACTGTCAGACATCACGAAAGAA
GTCGATATTGCAGTACACACACTATCCTCATACCCTGAAATGAATAATAG
GTACCTATCACAGATATCACATTCCTTTACACTAGATATGCTAACTGCCT
ACAGATTTCCCGGGGAAGGATAtccagttttgaagtcgactaGTCCGCCA
TGCTGTTTTCTGTTTTACACTAGATTtttgaacgttcgaatttcaaaaca
ttcgaatcccgCTGTTGACAACCAAAACAGAATACAAGATGGTGGACTAG
TTAGCTCTTAAAACTGGACACGCTGCCTTTGATATTGGAggcccgatcca
gtcaagtagttaaaGATCAGTGGTACCTATCCGATTCTTTATAAAGCAGG
GGGGATACAGAGGCAGGGTACCAACCCaaagggtactaacttgatttttc
actcaatttctttttagtaccacccacccatatttagtaccgggtactac
ttcattttttctgtaaaaaatagagacaccaccccctaaaatcttatatt
ttacagattagaTCAAAAGAGAGGGTATTATGTTAGTTTTTATGACTGAA
ATGAACAGATAATTCAAACAAACTGTCATTGATTAAGTCAGaggcttttg
tcctttgattttaataacacacttcttgaccatttcggaagttttgtctt
cacaaaaatcaaaaaatttctcaaaagagtaaaaaaaagtttctcaatta
aaaaaaatttcaaatcaaaaaaataatatttgaaaaaagtcaaaatatta
caaaagactacttttttttattgaaaaaggaggaaaactctgtgaaaaag
tacccaaatagtacCCTGTACATGCTAGAAGAGTAAAAAATACACACCCC
CACCCCTaaagtagtaccgggtactaatttttttgaaatgcaaaaataga
caccaccacccggctatggtatgggtcagtaccctgcctttgtacccccc
ccccctgtataaAGCCAGGTTCTATTACCtactttcaaattttgtctGCT
TTAACTCATGATAAAGGGAGAGCGGCTAGCTGCTTAAAAATGGTTGTTGA
AAATTCTGGCAAATTGGGGATTTTTTCTTCAGAGTTCATGATTCAAGCTA
GCATTTAACTGCTGTTTAAATGCATTTATCCTCTAATTAATattcgaact
gagcgtttccggaATAATCTAGATGATCGTATAAGAGAACTTCCTTCAGT
ATCAACCTTCAAAAAGCAATCTTCTACTTTCTAAGGCCCAAACCTTCTCC
TGTTTTCGGAGCTCGTGACAATCAGGAAGTGGTCTTTATCAACCGTCTCC
GTTTAGGTTTCAGTCACCtcaatgaacataaatttaGGCATGGTTTCCGT
GACACCTTAGATCCTTTTTGTGCTTGCAGGttaaattccattgaaaactc
TCAGCATTTTTTcttgcactgctctatatactCTTATGCAAGAAATCTTT
TATTCAAcagacttcagactttagactTACATATTTATCCACTAAGCCCT
CCTAACCTTTTCAATCTTTTGTTGTATGGCGATTCTTGCTTAGCTTTCGA
CATTGATAATGCAATACTTAATTTTACCATTGAATTTATTCTTGCATCAG
AAAGGTTTAGTGGTGCCTTATTCTAACTCATATTCCTCTTCAAAGCTGAT
CTctcttgttgttgttttttcaaattttgatttactGTAGTCTAGTACCC
TTGGCGATATCGCATTAGTGTCTAGCGGGGGCATTGactgtatttttttt
ctatgtttgtaATCGTATGTACAATGTACTTTttgaattataaagaaaaa
ggaaaaaacattAACTGCTAAAAGTTGTTTCACTTAGTGGTAGGATTCGT
ACGGAATCACACATGAGTttcttttaaaagtttaatatATTTGATGTCAA
TCTCGCGAGGGAGGTCCGCTGCTAAGGTCTGGCAAAATTTAACATCACAG
CAGATCACAGGCAAAATTGTAGTGCCAAAAGGTGAGTAAAAACTGGCGAT
TGATATCACGGATTCAAAAATTTGGTTTAGAATGGGTATATAGGACATTG
AATTAAAGTAAATAGTCATTTCCTTAGCATCATCTGCtttatcttcttct
tcttttttcagtaTCAAAATGGAAGTTGGTATAGAAGATTGTCTCCACAT
AGAATTCGAATATAATAAATCAAAGTAAGCCATCTGAAAAAGTTTCTACC
AAGTTTATACGCATTattccagaaaaatattttacttaccCCTCATATTT
AGATCATATTTTCCTAGAAAATCTAGTGGGTCTGAATTTGCAAGATAAAA
TCCAAGAGAGGTCTCCAAGGGAGGTCTCTGAAATCTAGACGGAATCCAAG
TGAGGTCTCTGAAATCTAGACAAAATCCAAGGGAAGTCTCTGAGATCTAG
ACGAAATCCAAGAGAAGTCTCTGAAATCAGACGAAATCCAAGGGAAATCT
CTGAAATCTGGTCGAAATCCAAGGGAGGTCTCTGAAATCAGACGAAATCC
AAGGGAAGTCTCTGAAATCTAGACGAAATCCAAGGGAAGTCTCTGAAATC
TAGACGAAATCCAAGGGAAGTCTCTGAAATCTAGACGAAATCCAAGAGAA
GTCTCTGAAATCTAGACGAAATCCAAGGGAGGTCTCTGAAATCTGGTCGA
AATCCAAGGGAGGTCTCTGAAATCTAGACGAAATACAAGGGAAGTCTCTG
AAATATAGACGAAATCCAAGGgagtacaaaagaaatttggaCAATAAATT
CAGGGGTTGGGAAATTTGCAAAAGTTCAgggggggTTGACTATTGTGCTA
TCAACCAGTAAAAAGATATCATTTTCTTCTGTACCAATCGCTCATAGTGC
TGAGCGAAGTTCTGAATCCCTTGACATTCTTTATATACACGATTTGACGG
AAAAAGATGGAAATATGAATCATTCGACAACCTACAACCATACGAGTACG
CAGCCTCAGTTTGCAACAAAGTTCTTTCGCTTCCCATTATAGATATCACT
TGAAAGATGTGATTGTTggtaaaatttactttttattgGTCAGAATCAAA
ATCAGACATATGGAACTTGCCATCATCAAACGAGAGACTGCTGGAACAGG
TAACATTTCATTCTAAACCAGCACTAAATTGATTCGTCTGACTAATAAAG
GCTTAGACACTGAATGTTTCTTAATTTCACAGTTGTTGAGTTGTATTTTA
TAGGAGAATGATGCCTTCCCTTCACACTACCCCTCACACTGGGTCCCTGA
CATCTCTACCCATAATCAAAGAGTAACCACTTATCTCAATTTCTTTCTTG
ATTGTTTCTAGGTCCAAACAGTTCACCAGACAACGAAACGATCGCAAAAT
ACGAAATCATGGACGGAGCTCCCGTTAGAGGTATGAGATCTTCGTCTTTC
TTAAATAGAATATTTCGTTCATCTAACGTACAAGTATGGACGTTGAGACA
AGTTTGTCTGCCAGCTTGGTCGCCTGTACTTATCTTGCCAATAACCCAGA
ATTCACTGGGGTGTTTCCGACGATTGTCACCCTCTATGATTTTGAGATGA
TAATGTTGCCTTGAAGATAATGTTTCCAAAATATGCCAATTTTGAATGGG
TTCTCTTTTTGCTTTGATCTAACCTTTAGTATTCTAAGGACTTTCGATGC
GCAAGCAAAAAcattaaccggcgtttgcgatgACGGGGACCGTCTAGAAA
GAGACATTATATAAATAGAATTATCACATAGGACAAAAGTCGAAATTTCA
CTTTCAAACTATGGCACCAAAAGTTGAATTGGGTGGTGGACTTGGTTTAA
CTTCAATAAGATCTAGTGAGAACTTCTGATAGATGTGAACCGGCCCTTGC
AGTGTTAGGGTCTGATGGATCTGTTTATCCACTCGTGTGTTCTTGTCATG
ATGtttttttCCAGGAATCTTACATCAAATTTGAAAGGGTGTAAAAACAT
GGAGCAGGGAGAGGTTGATATGACTTATGGTCTTAtctaattcttttttc
ttctctgCACAGGTGAATCCATTCCAATCCGACTGTTTTTATCGGGTTAC
GAACTAACGCCCACCATGCGTGATATCAACAAGAAATTCTCTGTCAGATA
TTTCCTCAACCTCGTCTTAGTGgatgaagaagaaagaagatatTTCAAAC
AACAGGTAACTACGCATGCGTTCTTCCCCATTCCCCCTCTACCTCTCTTG
CACCACTCCCTTAAGTTTTCTGTCCATCCTTCAAACAACAGGTAACTACG
CATGCGTTCTTCCCCATTCCCCCTCCCTCTCTTGCACCACTCCCTTAAGT
GTTCTGTCCATCCTTCAAACAACAGGTAACTACGCATGCGTTCTCCCCAT
CCCCCTCCCTCTCTTGCACCACTTCCTTAAGTTTTCTGTCCATCCTTCAA
ACAACAGGTAACTACGCATGCGTccccccccATCCCctctctctctctTG
CACCACTTCCTTAAGCTTTCTGTCCATCCTTCAAACAACAGGTAACTACG
CATGCGTTCTTCCTCATTCCctctctctctctTGCACCACTCCCTTAAGT
TTTCTGTCCATCCTTCAAACAACAGGTAACTACGCATGCGTccccccccA
TCCCctctctctctctTGCACCACTTCCTTAAGTTTTCTGTCCATCCTTC
AAACAACAGGTAACTACGCATGCGTTCTCCCCATCCCCTCTCCCTCTCTT
GCACCACTCCCTTAAGTTTTCTATCCATCCTTCAAACAACAGGTAACTAC
GCATGCGTTCTTCCTCATTCCCCTCTTATTCTTGCACCACTCTCCTAAGT
TTTCTGTCCATCCTTCAAACAACAGGTAACTACGCATGCGTccccccccc
ATCCCctctctctctctTGCACCACTTCCTTAAGCTTTCTGTCCATCCTT
CAAACAACAGGTAACTACGCATGCGTccccccccATCCCctctctctctc
tTGCACCACTTCCTTAAGTTTTCTGTCCATCCTTCAAACAACAGGTAACT
ACGCGTGCGTTCTCCCCATCCCCTCTCCCTCTCTTGCACCACTTCCTTAA
GTTTTCTGTCCATCCTTCAAACAACAGGTAACCACGCATGCGTTCTCCCC
ATCCCCTCTCCCTCTCTTGCACCACTTCACTTCCTTAAGTTTTCTGTCCA
TCCTTCAAACAACAGGTAACTACGCGTGCGTTCTCCCCATCCCCTCTCCC
TCTCTTGCACCACTTCCTTAAGTTTTCTATCCATCCTTCAAACAACAGGT
AACTACGCATGCGTTCTTCCTCATCCCCCCTCCCTCTCTTGCACCACTTC
CTTAAGTTTTCTGTCCATCCTTCAAACAACAGGTAACTACGCATGCGTTC
TCCCCATCCCCTCTCCCTCTCTTGCACCACTTCCTTAAGTTTTCTGTCCA
TCCTTCAAACAACAGGTAACTACGCATGCGTTTTCTCTCCCCCATCCCCT
CTCCCTCTCTTGCACCACTTCCTTAAGTTTTCTGTCCATCCTTCAAACAA
CAGGTAACTACGCATGCGTTCTCCCCATCCCCCTCCCTCTCTTGCACCAC
TTCCTTAAGTTTTCTGTCCATCCTTCAAACAACAGGTAACTGCGCATGCG
TTCTCCCCATCCCCTCTCCCTCTCTTGCACCACTCCCTTAAGTGTTCTAT
CCGTTCTTGAACAAATCATTAGGCtttttatggtctttttttgaactttt
tttccttCGAATACAGTCGTTTCTTTCGTTAGCTGGCATCATTGGTAGTT
AAAGGAAATAATTTAACGTATTTCATATGGTTTGCTTACGCAGTATTTTT
TAGGAAACATTCTTTTTGCCCTGCAAAAAtgttgagaaattcttttgttt
attctgcTTTGTTAGCTTGAGACGCGCCTCCTTTACACACCATAAAAATT
ATCTTTAGCAAGAAAAAGGGAAATAGATTTAACCAATACTAATATTCTTC
AAAGTCCATTGATAGCCTacttttaattttcttctttcctCACTCACCCA
GGAAATCACATTATGGCGTAAAGGAGACATCCCCAAAAGGACTGGAATGA
GTGGGTTAGAAACCTTTCAGAAGCCTGGTACAgaatga Coding sequence (CDS) from alignment at sc0000131_pilon:44813..53500+ >XLOC_036306 ID=XLOC_036306|Name=XLOC_036306|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1896bp|location=Sequence derived from alignment at sc0000131_pilon:44813..53500+ (Clytia hemisphaerica_ch_hm2_pilon)
aGTTTTTTCGGCTTCGGACAATCTGCAGAAATCTCCATTGAACTATCAGA
TTCAGATAAAAGAAAACAGGTGGAATTAAAGAATGAAGATGATAGAAggg
aaaaacattttcttttttatgatggtgAAACTGTAGCAGGGACTaGTTTT
TTCGGCTTCGGACAATCTGCAGAAATCTCCATTGAACTATCAGATTCAGA
TAAAAGAAAACAGGTGGAATTAAAGAATGAAGATGATAGAAgggaaaaac
attttcttttttatgatggtgAAACTGTAGCAGGGACTGTAAATATCAAA
CTGAAGAATCCTGGCAAAAAGTTGGAACATTATGGAATTAAAGTCGAATT
CATTGGACAAATCGGTAAATATCAAACTGAAGAATCCTGGCAAAAAGTTG
GAACATTATGGAATTAAAGTCGAATTCATTGGACAAATCGaattaTTTTA
CGACAGAGGGAACCACCATGAATTCACATCACTGGTCAAAGAACTCGTCA
AACCCGGAGAAATGACCACCAACGGGTCttataaatttgaatttgtAAAC
GTCGAAAAACCTTATGAATCATATACTGGCAAGGACGTCAGGTTAAGaat
taTTTTACGACAGAGGGAACCACCATGAATTCACATCACTGGTCAAAGAA
CTCGTCAAACCCGGAGAAATGACCACCAACGGGTCttataaatttgaatt
tgtAAACGTCGAAAAACCTTATGAATCATATACTGGCAAGGACGTCAGGT
TAAGGTACTTCTTGAGAGTGACTATTGTACGGAGACTGTCAGACATCACG
AAAGAAGTCGATATTGCAGTACACACACTATCCTCATACCCTGAAATGAA
TAATAGGTACTTCTTGAGAGTGACTATTGTACGGAGACTGTCAGACATCA
CGAAAGAAGTCGATATTGCAGTACACACACTATCCTCATACCCTGAAATG
AATAATAGtaTCAAAATGGAAGTTGGTATAGAAGATTGTCTCCACATAGA
ATTCGAATATAATAAATCAAAtaTCAAAATGGAAGTTGGTATAGAAGATT
GTCTCCACATAGAATTCGAATATAATAAATCAAAATATCACTTGAAAGAT
GTGATTGTTggtaaaatttactttttattgGTCAGAATCAAAATCAGACA
TATGGAACTTGCCATCATCAAACGAGAGACTGCTGGAACAGATATCACTT
GAAAGATGTGATTGTTggtaaaatttactttttattgGTCAGAATCAAAA
TCAGACATATGGAACTTGCCATCATCAAACGAGAGACTGCTGGAACAGGT
CCAAACAGTTCACCAGACAACGAAACGATCGCAAAATACGAAATCATGGA
CGGAGCTCCCGTTAGAGGTCCAAACAGTTCACCAGACAACGAAACGATCG
CAAAATACGAAATCATGGACGGAGCTCCCGTTAGAGGTGAATCCATTCCA
ATCCGACTGTTTTTATCGGGTTACGAACTAACGCCCACCATGCGTGATAT
CAACAAGAAATTCTCTGTCAGATATTTCCTCAACCTCGTCTTAGTGgatg
aagaagaaagaagatatTTCAAACAACAGGTGAATCCATTCCAATCCGAC
TGTTTTTATCGGGTTACGAACTAACGCCCACCATGCGTGATATCAACAAG
AAATTCTCTGTCAGATATTTCCTCAACCTCGTCTTAGTGgatgaagaaga
aagaagatatTTCAAACAACAGGAAATCACATTATGGCGTAAAGGAGACA
TCCCCAAAAGGACTGGAATGAGTGGGTTAGAAACCTTTCAGAAGCCTGGT
ACAgaatgaGAAATCACATTATGGCGTAAAGGAGACATCCCCAAAAGGAC
TGGAATGAGTGGGTTAGAAACCTTTCAGAAGCCTGGTACAgaatga
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000131_pilon | genome | sc0000131_pilon:44813..53500 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 865-951:8602 |
| Aaloc | 724-864:6615 |
| Aaloc | 655-720:5914 |
| Aaloc | 547-651:5594 |
| Aaloc | 484-543:4713 |
| Aaloc | 382-480:2550 |
| Aaloc | 226-378:1702 |
| Aaloc | 148-222:596 |
| Aaloc | 4-147:1 |
|
