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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000055_pilon:1064654..1071603- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_036263 ID=XLOC_036263|Name=XLOC_036263|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6950bp|location=Sequence derived from alignment at sc0000055_pilon:1064654..1071603- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCAGCTTCTCGTGATTATGACCACAATAACACCAATGGTTACTCCTC
ATCATCAAGCAACGAAGACGAATACGCTGGATATCCGTTCGACTTTTTGG
AGACCGATTTCCAGTGTATAATTTGTACGATGGTAATAAGAGGGTTCACA
GAGCTGCCATGCGGACATGCAGGGTGCAAATTCTGCATTGAAAAATGGGA
AAAACAGAAAGTGTAAGTGAATACTTTTTAAAGAATTTAACAACATAAGC
TTACAAACATTTACGATGTAAAACTATCACGAAGCTTCCTTTCGCAAAAT
TTAAAATATCGTAAATATTTCCCCTATAAACTTTTGGGCATCGTTAAACA
AAAATTTTTGAAACAAACTATTTTTAAAGTGGCCAATATTTCTTCAGTCT
GATGAAAAATAGCTGTTTTATAACCACTAAGTATTCATTTTACTTTTCAG
AGCCTGCTGTGAATGTCAGGAATCTTACGACAAAACCAAGGTAAATTTCA
GTATTTGCGTTTTTAAGTATCTTAAGGCTCTTTGTTAAACCTTTTGTGTC
AAGGTGGTTTGATGACTCAAAGGTTTACAATGGTTGTGTACTTCACGACG
ATTATATACAAAAACTTAACATGTTATATTTGGAATTATATGTCCCAGTC
GAATTAAAGGGAAAATTTTTCATTTTCATTTTTACCTTGAAGTTTGGTAA
CACCTAAAAGATAAACATCGATTTCTGAAGAGAAATCGTGAAAAATCTAT
TTTACTTTTGGTGGAAATATGTTCCAAAAGTATTCATACCTACATAGAAT
GGTATGTCTGGTAAATTTTAGATGACATATAGCTTGATGAGAAGAAAAAA
ATATATGAAAAATACAAGATAAAAAAAAATCCAGATAGCAGCATAATTTG
AAAATCCTGTCTTACTTGAGTTTTTGCTTCGGAAGAAAGCTGTTTTCTCT
CTGATTTCATCTACAGCATAAAACAGCTAAAACCATCGTTGTCAAATAAA
TTTTTATATTTGATATTTTATGATATTGTCGTGACCGTTTTCAGATCAAT
TTGAATATTTGTAGCCCTCTCCTTTAAAATAGATGTTAAGGACAACAACT
CCCATTCAGTCTCATTCAAAATTGAATACAGCTATGAATTTTAACATTTA
AAATTAAGAGCTTTTAAATTCAAAAGCTATTTTGAGCCTAAGCGCGTTTA
ACAGTTAGGCGCTTTTAAACTCTATTTTTCTACCTATTCTAACTATTTTT
CTACCCACTAAAATGATCTGAACAAAAATAGGAAAATTTGATTGAAAAAT
CCTCTTCTCTTTTTAAATTTCAAAAGAATTGACTAGTTTTTACACGCGGT
GTCTTTGATAATTACATAGAATAATGCCAGCAAAATTGTCAATTAATTTT
CAGAAGCAGGAAAGTCGGTACAATGACCGAAAAATCAAACATGAAAGACA
AGCTCGCTGCAAGCAACACGAACAAGGCTGCACTTGGCAAGGCTCCATTG
CCGATTACAAAGATCAGGTAGGTATTTCATAATTCCTAATTGCTTGCGAT
TTAAAATAACTTTTCTTGGGTCATCAGTAAAATAACTAATGAAAAAATGA
GTTAGACATATGTATTTTGTGCATAGCATCGTAAACGCTGTGGCTTCAGA
AACGTCAGATGTCGTCTGTGTAATCAAAAAGTCGCTCATCAAGAAAAGGA
GGGACACAAGTTGACGTGTACACATCGTTTGGTTAATTGTACAACATGTG
GTGCCCAGTACAGCTTCATCAACAAAAAGGTACTTCTTTTATTTTTCAGT
TTTTTTATTGTCAGTGACTTAGTGAAAGCCTCTAACCAGTGTAGATGAAA
CTGAAAAAGTCGAAAACTAAAGGGGATTGCAAATTCATTTCATTATGATA
GGGAGGGTGGCTACATGATCAAGCAGTCGAATTACCAAAACATTTTTGTT
TCTCTCGATAATTACTTAATTAAAAGATATTTGTTCATCTGGATTTGTAA
CTTTTTAGAAACACGAAGACGAAGAATGCAAGTTACCTTGTGATTATTAT
CAATATGGTTGCCATGAAAAGGTGAATCCTCTAATACTCCCAGCTATCTA
ATAAACGGAGATCGGGGTTAAAATAAACTGGAGGTTTGGAAAAATCTTTA
AAATTTGATAAGCGGGGCGTAATTACCGGAAGATCAGAAATTGCACTTTA
AAAATTTCCAAAGTAAAGTAATTGTATACTGAAAGAGGATACTTAGAGCA
GAATTTCTTCTTTTGACAGCTGAAAAAATCTCCAAAATCAATAAACAGGG
GACGTTTATTAAACACCTAAGATTCTTACGTGGATTATTTAACTTCTAGT
TCTTGAAGAATTGGTTGTGGTATTTAATATTTGCTGATCACTTCGCTGTT
GGACTTGCCCGGAGGTCCCATAAATTAATTGCTCTTCGTTCGCTTATTTG
TTAGTTTGTTTTTACCTAGATGATTCTATCGTCTACACATTATCACTTAA
AAGGGGAATAATTCAGGGAGCGGGATAAATTTTAAAACGAGTTTAGTTCG
GAGCGGAGTAAACAGTGGCGGAGGTGTTTACAGTGTATTGTTGTTCCAAA
GCTCTGCCGCCATTATTTTTCCCGTAAACCGCCCTGACTCTGCAGATATA
TTTTCTTGCGTTTACTGAACCTCAAAACGGTCGATAGCATCGTCTAGTGT
TTACCCAGAATTTGACGGAGACCGGCTGTCGAAAAAAAATCTTTTCCGGT
CTTCCGTTCCTGAAATGTCTCTCAAAGTCTCTAAGGGATTTTCTCAAGAT
TATCTTTTTAGCTTTTCCGGATGTTTTGTACATAATTGCGTTAGTACTGC
CATCAATGTGTCAAAAACAGTTTTCAGAAAAAAATCTGTTCATAGGAAAA
GGTATTTAATGATAATGCCAAACGTTCTCAATCGTTTGATTTCCAACGAA
ATTTTTTTTCAACCCAGAACACCTTAGACTACTGGCATCCACATAGGATT
TTTGTTTTTGGTACATGATGTTTTTCTTTTGGTTCAACACAATTTTGCGA
ATTGAGATTACAAGTTTTAAAAAGCAAACTCAATGAAAAGATTTCTTGAA
TTCCATAGTCAATCGAATGATGACAGAAAATCATTTTTTCAGCGTCTTTC
TCAAAGGGAAATCAGCACAGATTTGTACATTCTTGAATAAAAAATAACAA
GTAAAACTATAAATCATAATCTTCTAATTTAGCATAAACTGACGCTGAGA
AATTGTTCAAAAACTAAAGGGTCCGCATAACTTTTAGAGAGACTTTCACT
CCCTTTCTCAAGTTATTAACATTTTTCATGATTTTTTGTACATTGAAGCA
AATTTGTAATTCCCAAAACAATGAAGCCAAATTTCCGTGAAAAATTACTT
TTATTGAGATTTTTCCATTATTCTTTCATGCGATTTTCTTTAAATTTAAA
ATTTAATATTTTCTGTTCACTCCAGGTATACAAACCACACATGGAACGTC
ACCTCGCCAATTTAGCAAGACGTCATATCGAACTTGTTAAATCTCATTAT
GACAGAATTGTCACAGAACTTGTTTCTGAGAAGGATAAGAAGATCACAGA
ACTTAACACGACAGTCAACTTGCAGAGTGAACACATTGCAGAACTAACAA
CGCAGCTCGAAGTAAATAAAATACCCATGGCAACCAGTTCAAGGTAAACA
AAGCACTATGTGTTAGCTTTTGTAATTCAGTTTTTCATTTTTTCTGAAAC
TATTTCTAACTGCCTCGAAAAAAGTTTAGTTCTTCATTATTTCAGCTAAA
AAATCTCATATAGGACCGAGCTTGAGTCATTTGAAATTGCGCTAGCGTAT
TAAAGTCCTAGTAAATCCATAAATTACTTAGGGCTCTCTTAATTCTAAGA
TTTCAAACAATTTTTCGATTACACATGGAACACACCAACTCTTAGACTTT
TTCAACTATCTTAGTTCCCCCAGGTCTAGACGAGAGTGATCTAGTATGCC
GTAGCAAGACTTACACTCCTATTATATCTCTAAAAGGACCACAATCCGTT
ATTGGATGTCAGCAAACAAGATAATTTCCTAAATTCTCAAATATTCTTGA
AAATAGGTGTAAAGTTCCTCATTTTTCCCTTAAAACAAGAACAACATGAA
GATAATCTGAAGCTCGAAGTGCCAAAAAAATAACAACAACTGAGGCTTTA
CAAAAATTCACTCAATTTTATAAAAAGAAGACAAATCAATTGATTTTATG
ACACACTCTTCTCCTAGACCTGGTGGAAACTCTTCCCACTGATAAAAGGC
AAAAATATGGTGATTTCCCTGTGGATAATTATAATCCAATGTTTGTCCCT
ACTGAAAATAATCGATTGAATAAATCCTCACCGCAAAATATTGTCCTATT
TTTCCATCCCTACTGAAATTTTCTTACTTTAGAACAATAGAATTAGCTCC
CCAGTCGCAAAGAACATGGGATTAACAAGCCCCATTATTTTTACCACACT
GGCTGAAAAAATTCCACCGGTTCTGTGATGGACGAAAGAGTGATATACAA
TATTATCAATCCAACTAATTTAGCTGGTGTCAACGACATTCATTTCAAAT
TATCTCCCATTATCTAAACCTAACTTTTTCATCTATTAGTATTAGCTCAC
CAACAGTGAAACCGGCAGTTAAAACGAAATCTTTTCTGAGAACCCCAATT
GGACTTTTCAAAAAGAAAGAGGACAAGCAACAACAACAAGCAACAAATTC
CCTTCAAACAACTTCGTGAGTATTTAGTTCTTTTAAAGCTTTGGAGATCA
TTATTGTTTACTTAAGACCTCGTTCCTTTAGGTAGGAAGAAGCCCCTTAA
GTGCTTTTGGTGAAATTTAATGGAAATAATTTTTCATCGAAATAGAAATT
TTCAACTTTATTTAGCGGTGACACAATAAACTAAATAATTATAAATTCCT
TTACCTATATTTTTTTTTGCAGTGAAATTACATTCCAAGAATTTTAAACA
AATATACTTTGGCGGAATGAACATAATAGAATTCCTTGTTGAAACCCTAA
ATATTCTAGAGTGAAGAAATTCGCTGGCAAAACGAAATTCGTCACTTACA
GTGTACGGCCCCTAATATGTAGGTTGAATCTAAATTTTTTCTAGAGATCC
TAGTAAAAAATATTGCAAAGGCAAGATAGAAAACTTCAAAAATGCAGAAA
TAGCAATTTTTAGTGGCTGACGTCATTAAAAATTTTTTAACAAAAATGTT
ACTTTGAAATCAGTTCTTGTTAGTGTATTTTCTTGGTGGTGTATTTTGTC
AAAATTCTATGATTATCAACGCTTTACACAATAAGAAGATATCGGACTTT
GAAAGAATTTTTTTACCATTCTCTACACATGAATGCAAAATTTTGCTGTT
TTTGCTGATTCAGCAATAATTTTTCGAAAATTATATGACTTTTCTTATGA
CTTTTCTTTACAAAAGTATTAGGTTTCAATTTTCACATTCAGATTTTTCA
GACCTTGAAATTCTGATTAAGGGGCCCCGAAAATGCTGGTTAGCTCTAAG
AAGCTGTTTTTTTCATTGGCTGCATTCAAAGATAACTTTGTTTGGGTTTC
CTTAGCTATTGGATATAGATCTCCTATACGAAAACTTAAGAGCTTTTCTG
CGATATTTAGAGAGCTGGAGTCAGTTAAACACGATTTTTTGATAATTTTG
ATGGCTCAATTTTTTATGTAACCCACATAATTTGAAACTAAAAACTTCTT
TATCTTATAAAATACACGTTTTTTTTTTATAAGAACATACTAAGGCTTTG
GAGACTTAAAAACATGCAATTTCTTAAGAAATTACATCAAAATGCTCAAA
AAATGCTGAAAATAAGAACATTTTAAGAACATTTTTAGGCTTCAAATCCA
AAAAAACTAAGAACATCCGAAGGCTTCGAAAATTTTTGACGTTCTTATAA
AAAAAAAACGTGTATAAAGTACTCAGAACAACTTGGGAAAAATCTTTCGT
TTAAACTGTAACTGCAGTATAAAATACTTTGCTAAGCACCAACCTACATT
TTAGGGGCCATGCATATACACTGTACTAATAATTTTGCTACTTTTTTCTG
AGGAATGGTTTTTGACAGCAAATATTTTACCAGGGTTTCAACGTTAGTGT
TTTAGAAGGATTTATACTGGAAAGGCCGATAAACTGAGCAATTATTTTAT
AAAACTAATATAAGGGGATGTCATTTTTCACAATAATTTAGGCTTTTATG
CGAGTGTTCTCCCACAACAGTTAATACACCTTTTTCCGGTTAGCCATTTC
GTATAAAAAGTCACTAAAATTTCGAGTAAACAAACCATCTCATATTGGCT
AAAAAGCAAAAACATAAACGAGACAATGTCCAGAGTAAGAGCACAAAAAG
CACATTTTTCTCTACTCTGCACTGTACTTTTCAATTTGTTTACTCGAAAT
TTTGGTGACTTTTTATACGAAACGGCTAACCAGAAAAAGGTGTATTTTGA
TGTCAACTCTTGAAATGTACGTCAGAAATATTTTGAATTATCGCGCCAAC
TAGGCAGGCGTAAATTTGCATATTTTTGATTAGTAAAACTTGTCATTCAT
ACATTGTATTTCGTATAAAGTTTTTCGTTAATTTCTATGCCCTCTCCCTA
TTAAATACGGTAATCAGAAGGGTGTTTTACTAAGAATACTGATTTTCAAA
GATGTAATGTAGAAAATTGAAAATTAAATGGTGATAACTTTCAATATATT
TCGGATCCCAAAATCGTTCAAAATAAAAGTTGTTTTTTTATTTTTCCGTA
AAATTCTCAGAAGAGTTTTGGATATTTTTGACAGTGGAATTTTCTTCTTT
GCCTGTCTTATTTCTTTCTTTAACCTTCATTGTTTAATTTAGAGCCAAAT
GGGATGAAAAGAAAATTTATGAGATAGTGTTCAAGGGTAAAACGCTGACG
Coding sequence (CDS) from alignment at sc0000055_pilon:1064654..1071603- >XLOC_036263 ID=XLOC_036263|Name=XLOC_036263|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1968bp|location=Sequence derived from alignment at sc0000055_pilon:1064654..1071603- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCAGCTTCTCGTGATTATGACCACAATAACACCAATGGTTACTCCTC
ATCATCAAGCAACGAAGACGAATACGCTGGATATCCGTTCGACTTTTTGG
AGACCGATTTCCAGTGTATAATTTGTACGATGGTAATAAGAGGGTTCACA
GAGCTGCCATGCGGACATGCAGGGTGCAAATTCTGCATTGAAAAATGGGA
AAAACAGAAAGTATGGCAGCTTCTCGTGATTATGACCACAATAACACCAA
TGGTTACTCCTCATCATCAAGCAACGAAGACGAATACGCTGGATATCCGT
TCGACTTTTTGGAGACCGATTTCCAGTGTATAATTTGTACGATGGTAATA
AGAGGGTTCACAGAGCTGCCATGCGGACATGCAGGGTGCAAATTCTGCAT
TGAAAAATGGGAAAAACAGAAAGTAGCCTGCTGTGAATGTCAGGAATCTT
ACGACAAAACCAAGAGCCTGCTGTGAATGTCAGGAATCTTACGACAAAAC
CAAGAAGCAGGAAAGTCGGTACAATGACCGAAAAATCAAACATGAAAGAC
AAGCTCGCTGCAAGCAACACGAACAAGGCTGCACTTGGCAAGGCTCCATT
GCCGATTACAAAGATCAGAAGCAGGAAAGTCGGTACAATGACCGAAAAAT
CAAACATGAAAGACAAGCTCGCTGCAAGCAACACGAACAAGGCTGCACTT
GGCAAGGCTCCATTGCCGATTACAAAGATCAGCATCGTAAACGCTGTGGC
TTCAGAAACGTCAGATGTCGTCTGTGTAATCAAAAAGTCGCTCATCAAGA
AAAGGAGGGACACAAGTTGACGTGTACACATCGTTTGGTTAATTGTACAA
CATGTGGTGCCCAGTACAGCTTCATCAACAAAAAGCATCGTAAACGCTGT
GGCTTCAGAAACGTCAGATGTCGTCTGTGTAATCAAAAAGTCGCTCATCA
AGAAAAGGAGGGACACAAGTTGACGTGTACACATCGTTTGGTTAATTGTA
CAACATGTGGTGCCCAGTACAGCTTCATCAACAAAAAGAAACACGAAGAC
GAAGAATGCAAGTTACCTTGTGATTATTATCAATATGGTTGCCATGAAAA
GAAACACGAAGACGAAGAATGCAAGTTACCTTGTGATTATTATCAATATG
GTTGCCATGAAAAGGTATACAAACCACACATGGAACGTCACCTCGCCAAT
TTAGCAAGACGTCATATCGAACTTGTTAAATCTCATTATGACAGAATTGT
CACAGAACTTGTTTCTGAGAAGGATAAGAAGATCACAGAACTTAACACGA
CAGTCAACTTGCAGAGTGAACACATTGCAGAACTAACAACGCAGCTCGAA
GTAAATAAAATACCCATGGCAACCAGTTCAAGGTATACAAACCACACATG
GAACGTCACCTCGCCAATTTAGCAAGACGTCATATCGAACTTGTTAAATC
TCATTATGACAGAATTGTCACAGAACTTGTTTCTGAGAAGGATAAGAAGA
TCACAGAACTTAACACGACAGTCAACTTGCAGAGTGAACACATTGCAGAA
CTAACAACGCAGCTCGAAGTAAATAAAATACCCATGGCAACCAGTTCAAG
TATTAGCTCACCAACAGTGAAACCGGCAGTTAAAACGAAATCTTTTCTGA
GAACCCCAATTGGACTTTTCAAAAAGAAAGAGGACAAGCAACAACAACAA
GCAACAAATTCCCTTCAAACAACTTCTATTAGCTCACCAACAGTGAAACC
GGCAGTTAAAACGAAATCTTTTCTGAGAACCCCAATTGGACTTTTCAAAA
AGAAAGAGGACAAGCAACAACAACAAGCAACAAATTCCCTTCAAACAACT
TCAGCCAAATGGGATGAAAAGAAAATTTATGAGATAGTGTTCAAGGGTAA
AACGCTGACGAGCCAAATGGGATGAAAAGAAAATTTATGAGATAGTGTTC
AAGGGTAAAACGCTGACG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000055_pilon | genome | sc0000055_pilon:1064654..1071603 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 916-972:58 |
| Aaloc | 790-912:2311 |
| Aaloc | 664-786:3383 |
| Aaloc | 583-663:3476 |
| Aaloc | 520-582:4943 |
| Aaloc | 367-519:5325 |
| Aaloc | 253-366:5548 |
| Aaloc | 214-252:6500 |
| Aaloc | 1-210:6951 |
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