|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000218_pilon:589202..592482- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_036259 ID=XLOC_036259|Name=XLOC_036259|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3281bp|location=Sequence derived from alignment at sc0000218_pilon:589202..592482- (Clytia hemisphaerica_ch_hm2_pilon)
CTTTTTCAAGACGAAATCTTCTTCTTTTCAAACTATCTTAGAATATGTAA
TTGGCGCAGAAAAAAGGATATGTTTTTTTTTCGAGAAAGAAAATTACAAC
ATTTTTTATTGTTAATGCTGGTCGTTGCATCCACAACCACTTCAAAATGC
AGGAAAAAGGTAAGTTACCTTACAGAGTGTGAACAAGGAAGACTCAAAAA
AAATGAAAATCACCCATTGACGAAAGTTTCTTATTTTAATAGTAGAGTCA
ACCAATACCAAACAGTGGAAGTTTATTTTTCTAGTAAAATCTTAGACCAT
AATGAGATAAATTCTTTCGTTTAAAAGCAAAAATGATGTGCAAAGAGTTT
TGAATTTCTTTCAGATTCCAGTGAATGATCATGGTATTCAACCAACCACC
ATAATCAGTGAAGGCATGTATTCCTGTTATTTTAAAAGTCTAAATCTAAA
ATTTTCCGCTTTTATTCGGGAGACACTGTATACTTTAGGAGTACAAACTT
TGGCAAGCAGAAATTTTCGCGATTTTCGCGAATTTTCAGGAAAGTAAATG
TCATTGAAAATTCTTAACAAGGATATTCGCAAAGGTTTATTTTCATTTTT
ATCCTACGATTCACGAAAGTTTAAAGTGTTTTTTTCCTCAAATTTGCAAA
AGTAAAATTTTGTAGATTTCACAATTTTATGATCGCGAAAGTTATTTCTG
CTTGCGAGAGTTTGTGCGATCTCTAATAAGTTTTCAAGAAATTTTTTTTG
ATTTGAAAAGGTTTGTCTACTCCCCTGTAAGAAAATTTAATGGAATTGCC
CAGTAGAAGCCATAACAAGTGACACATTCTATTATCAAATTTTGCCTGAA
TAACACCAGCAGGCACACAACGCTGTTTCGACGTTTATCTAATGTTACCA
ACGTCCATATAACGTTAGTTGAACGTGATGAAACAACGTTGTGTGCCAGC
TGGGACTCTCCTTATTTGAGGGGGTTTATCTAAAGAATCCTGCATTACTA
AAAATAGACAAAAAGAACGACAAATTTCATAAAAGATGACATATTTCGCC
GTTCACAACCCGACCGAAAGTGACTGTACAACCCCTAGCGATTCATTCCC
TTTCGTTTATCACGGGAATTAACTACATGTGGTCTAAAAGAACGACGAAT
TACGCATGCGTGTTACAATGCAGGATCCTTCAGAGGAACAGACTGTTTAC
ATGATACTTTCAATATATCTTTCAGCCAAAGAATTACATGCGAACAATTT
ACTTCTTTTTATTCCCATTCTTTCCACTGAATGGAGTGTACAATTACAGT
TTAAACTTCTTTCTGAGCATGCTGATGGAAGATGGTGTAATATTATGCAT
GTTACAAAGGGACAGAATAGGGATGTTTACGGAGATCGGGTACCAGCCAT
TTTCTTTGATAAGGTAAGCTTTTCATTTAGCATTTTAGTATACTTAAAAA
CTTATACCTTAATATAAATGGAATTCGCACCCTCACTAAAATTAAGTTTC
TTCAGGATTACCTTATTTTCTCTCAAGCTTTAATTTTTAGACAAAAAAGA
ACCCATTCAACCTAATAAGTAGGTCAATGAGATTTTAAGCTCGATTTTTT
GTTAGAAAATTGCAGTTAAAACAAAAGAAAATAGTTAAAGATCAAAGAAA
TTTACCGTTAACTTCGATCGGAATTGATAGCAAGTTGTGAGGCCTAAGTT
TGCTGATACAAATGACAGCTTTCTAAATCATGGTACCATTTTCAACTTTC
TCCCCATTTGCCCAACTCGAAAAAAAAGAAGAAGAAACCGGCAGCATCAC
GGTGGAGCGCATGACGTCAGCTGCGCGGAAATTAACACGCTTGTAATTTG
TTCATTATAGTAGGGCCGTGGGCGGTTTTTTTGACAGGCGCCTTCTAATT
CTCCAATCGCCGTCGGCCATTTTGAAGTAAAACAAAAAAATTAAAAAATA
GCACGCTAAAAGCGAATTTTCATTTGTTATTGTCTCCTGGCCAAACTTAA
TGTTAAATTAAGTGGGTATCAATTCTGCTCGTCAAATTAGTTATCACTTT
AATTAGGTACTTTATTCATAAGATATTCTCTATCCTTATTTACTCTTGAC
AGACTGTATTTTTCATATAACCGTATAAGCTCGAAACCAGATTTATGCCG
GCATTCTTACGCCGTCTTTAGCGCTTTAGATAGCACGATTAAAAGAGCGA
AAAACGTTTAAATTTTAAACAAAGTGAACAAAATAATTTGAAAATGTGAT
TTTTTTGGTGCCTACTCTCAGGTTCCAAATAAATGCCCCTCCCCCGCTTG
TTAATCTTTTGAAAATTTGCCAACCCCCCCCCCCCCCGGACCTTATAAGG
ACCCCCCCCCCCCGTTTATTAATTTTAAAGAATGTTTTCAGCTTTCAAAA
ACAAGGTACTTTATTTCTCTTGAAATAGCCTGATTTTAGCATTACCTTAT
TTTTGAGTTTTCGTAATTACAATTTCCACCCCCCCCCCTGGTAATTAGGT
CCCTACCCCAGTCTAAAAAATTTTCCAAGCCCCCCCCCTGTTTATTTGAA
CCACCTTGTTTATTTGGAACTTAAGAGTAAGTGCCATCAGTCATTTCTAA
AAATTTTAAGAAAATCGCTCGTTCAAGCTTTAAAGGTTTAAGACTGCGCG
GGCCTGACTGAGTGATGGAAAAATGGAAAAATGCCCATTGGTAAAACTTC
AATTCAATTCCCAAAAAATAGTCAAAATCTCAAAAAAGTGGATATTTGTC
AAATTTTTGCATTTTTTTGACTTTTTTTCAAAAAATCTCGCTAGAAAGAC
TCAGTTTTAAATTCTTTTTGCTTGACTATGAAGCACAATCCAATTTCTAT
GACTTAGATAAAACTTTACGATTTCTAATTATCAAACTGGGCATTACAGG
AGAGCTTCGCCCTCCTATATAGCCCATGTGAAATACACTTGACATGTACA
CGGGAAGGGTTAAATTTCAAACAAAATATTGTTCTTTTTTCAATTTCAGT
TCAATATGATACTTTCAATACAATCAGCAGTGAATGGCATTATAAGTTAT
AATATTTTCCATACGATCCAATATAACACAGAATACAATGTGGAAATTCA
CCAGAGATACAAAAGTGGAGGTGTTTACAAATATTCCATCCTTTTCAATG
GGGAAGAAATCCACTCAACCAATAATACACAAGCTCGACAATTTTATGGC
GTGAAAGTTTACATTTCCGATCCTTGGTATAACGCATGCATTGGTTTGGT
TAAAAATGTCAAGATCACTAACTTTCTGTAA Coding sequence (CDS) from alignment at sc0000218_pilon:589202..592482- >XLOC_036259 ID=XLOC_036259|Name=XLOC_036259|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1356bp|location=Sequence derived from alignment at sc0000218_pilon:589202..592482- (Clytia hemisphaerica_ch_hm2_pilon)
CTTTTTCAAGACGAAATCTTCTTCTTTTCAAACTATCTTAGAATATGTAA
TTGGCGCAGAAAAAAGGATATGTTTTTTTTTCGAGAAAGAAAATTACAAC
ATTTTTTATTGTTAATGCTGGTCGTTGCATCCACAACCACTTCAAAATGC
AGGAAAAAGCTTTTTCAAGACGAAATCTTCTTCTTTTCAAACTATCTTAG
AATATGTAATTGGCGCAGAAAAAAGGATATGTTTTTTTTTCGAGAAAGAA
AATTACAACATTTTTTATTGTTAATGCTGGTCGTTGCATCCACAACCACT
TCAAAATGCAGGAAAAAGATTCCAGTGAATGATCATGGTATTCAACCAAC
CACCATAATCAGTGAAGATTCCAGTGAATGATCATGGTATTCAACCAACC
ACCATAATCAGTGAAGCCAAAGAATTACATGCGAACAATTTACTTCTTTT
TATTCCCATTCTTTCCACTGAATGGAGTGTACAATTACAGTTTAAACTTC
TTTCTGAGCATGCTGATGGAAGATGGTGTAATATTATGCATGTTACAAAG
GGACAGAATAGGGATGTTTACGGAGATCGGGTACCAGCCATTTTCTTTGA
TAAGCCAAAGAATTACATGCGAACAATTTACTTCTTTTTATTCCCATTCT
TTCCACTGAATGGAGTGTACAATTACAGTTTAAACTTCTTTCTGAGCATG
CTGATGGAAGATGGTGTAATATTATGCATGTTACAAAGGGACAGAATAGG
GATGTTTACGGAGATCGGGTACCAGCCATTTTCTTTGATAAGTTCAATAT
GATACTTTCAATACAATCAGCAGTGAATGGCATTATAAGTTATAATATTT
TCCATACGATCCAATATAACACAGAATACAATGTGGAAATTCACCAGAGA
TACAAAAGTGGAGGTGTTTACAAATATTCCATCCTTTTCAATGGGGAAGA
AATCCACTCAACCAATAATACACAAGCTCGACAATTTTATGGCGTGAAAG
TTTACATTTCCGATCCTTGGTATAACGCATGCATTGGTTTGGTTAAAAAT
GTCAAGATCACTAACTTTCTGTAATTCAATATGATACTTTCAATACAATC
AGCAGTGAATGGCATTATAAGTTATAATATTTTCCATACGATCCAATATA
ACACAGAATACAATGTGGAAATTCACCAGAGATACAAAAGTGGAGGTGTT
TACAAATATTCCATCCTTTTCAATGGGGAAGAAATCCACTCAACCAATAA
TACACAAGCTCGACAATTTTATGGCGTGAAAGTTTACATTTCCGATCCTT
GGTATAACGCATGCATTGGTTTGGTTAAAAATGTCAAGATCACTAACTTT
CTGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000218_pilon | genome | sc0000218_pilon:589202..592482 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 397-678:283 |
| Aaloc | 211-396:2055 |
| Aaloc | 160-207:2918 |
| Aaloc | 1-159:3282 |
|
