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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000055_pilon:1126002..1132239+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_036252 ID=XLOC_036252|Name=XLOC_036252|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6238bp|location=Sequence derived from alignment at sc0000055_pilon:1126002..1132239+ (Clytia hemisphaerica_ch_hm2_pilon)
aataagaaaaaacaacaacataatATGACACGCCATGGTAAAAATTGTAC
GGCAGGTGCTGTGTACACATATCATGAAAAGCAGAAAGACACCAAACAAT
CAGGATGGGGTTCGCAACAAGCTCGATACAGTAAAGACTCCATCAAAGAT
TTTGACTGCTGCTCATTGACTCTTCAGCCCTGCAAGGACCCAGTAGTGAC
AAAGGAAGGCCACCTGTATGAGAGAGAAGTCATACTGGAGTACATTCTTC
ACCAAAAACAAGCCaacaacaagaaaatgaaagcCTATGAAAAACAGGTA
CTTTAATAGTTTTCTCTTGGGTCAGTCCCCCAGAAATTCTAGACGACCCG
GTTGTCAAATCCCacccctgaaaatgaaaaaaaatcgttttcacACGCCT
TTTGTGTTTTCCCTCCCAGAAATGTTGAAATcccccccccTTTTCGGCCC
AGGTCCAGGGGACCGTTCGGGGACCCCCGTTCGGTGTCCGGGAGGCCCCG
AAATCGGTCCACGGAGCGAGCCAGAAcgatttttgccggcttttgacgat
actttgaggaactttgaccCCCCTCTTCACGACCTGGATCCGGGCAATTA
ATTTTTATGCAACTTATATTTTAAATTGCACACTAAAatgtagttttgaa
aaaatttcaccacaagagaaaaaaaattagattgcCAATGTCTAAATAAa
atgctttttggacctacctccgggtgccccggtggaggtcctataaatta
acccatgtccgttcgttcgttcgttcgtctgtccgtctgttaccagcttt
tctcaggattggctcattagttttttctgattttttgcacaatgatgcaa
aatggcaatgcccagaacgtgacggagcccgatttttgagaaaaaattta
tttgggcaaatttgggccaaaaactacctaaaaatagggttttttggact
ttgtgcaaaatcctgtcattactttttcctgattttttgtacaaagatgg
agggcaagattctctaaagaatggctgaagtggtttttccggaaaattct
tattcgcctttaaaaaacggattttcgtattttggggggaaattcccttt
aaccaaataagaaaaatatagcttttaacaatgttgactcgttatttttt
tctgattttttgcgcaatgatgcaaaatggcaatgcctaaaatgtcggag
cccgattttcgaaaaaaaatttatttgggctaatttggccaaaaactgcc
taaaaatagggttttttggactttgtgcaaaatcctgtcattactttttt
ctgattttttgtacaaagatggagggcaagattctctaaagaatggctga
agtggttttcccggaaaattctttttcgccttaaaaacggattttcgtat
tttggggaaattccctttaaccaaataagaaaatatagcttttctcaaag
ttgactcattatttttttctgattttttgcacaatgatgcaaaatggtta
tgcctaaaatgtgacggagccagactttcgaaaaaaaatatatttgggca
aatttgggccaaaaactgcctaaaatagggttttttggactttgtgcaaa
atcctgtcattactttttcctgattttttgtacaaagatggagggcaaga
ttctctaaagaatggctgaagtggtttttcccggaaaattcttattcgcc
ttaaaaaacggattttcgtattttgggggaaattccctttaaccaaataa
gaaaatatagcttttaacaatgttgactcgttatttcttTctgatttttt
gcgcaatgatgcaaaatggcaatgcctaaaatgtgtcggagcccgatttt
cgaaaaaaaatttatttgggctaatttgggccaaaaactgcctaaaaata
gggttttttggattttgtgcaaaatcctgtcattacttttttctgatttt
ttgtacaaagatggagggcaagattctctaaagaatggctgaattggttt
ttcccggaaaattctttttcgccttaaaaaacggattttcgtattttggg
gaaattccctttaaccaaataagaaaatatagcttttctcaaagttgact
cattatttttttctgattttttgcacaatgatgcaaaatggttatgccta
aaatgtgacggagccagactttcgaaaaaaatatattgggcaaatttggg
ccaaaaactgcctaaaatagggtttttggactttgtgcaaaatcctgtca
ttacttttttctgatttttgtacaaagatggagggcaagattctctaaag
aatggccgaagtggtttttcccggaaattcttttcgccttaaaaaaacgg
attttcgtattttggggaaattccctttaaccaaataagaaaatatagct
tttctcaaagttgactcattatttttttctgattttttgcacaatgatgc
aaaatggcaatgcccaaaatgtgacgaagccagatttttaaggaaaatta
ttttgggcaaatttgggcaaaaaacagcttaaaagtttttttgggcctga
atggttcaagtgattttcgtattttgggaaattcctttttaccattttac
attattcaacacacaagctttatttttccattctgaattgttgtacaatt
attgtcacttttttcttattttcatctgatgttaatcattaggtaggtcc
attcagcatgttgcttgttttgaattttatttacaagaaaTAGAGAATGT
AATGATATACTGTTTTCTGATTTCtgttaaaagttgaaaagttttttccc
CAGAAAGATTTTGTTGCACCTttttaaaccccccctggacttCCATTTTT
ccttttgcccccccccccccttttggaatttttttgaaaaaatccccCCA
gcaaaaaggggggggggagaaaaCTAAGcttttccttttcaaattttctt
aactgCTGAtgtgactttgaaaaaaaaagccatgttcttttattatttgc
agggtgtctacgggaccttgaaaaccttgaaaatgaaccacccaaccttg
aaaaccttgaaaactatcaattttctgggaaaaaacCTCTTCCTCTTCAT
ACTTTTTATCATACATACATGTAGGTTTTTCTCTAGAATTGCAAATTGAG
GTATCTTGCCGGACATCCCTCTACCATGATTTTTCCGATTTAGAGtaatc
tgaaaaattaagaacgcatttaagaacatttcaggctgaaaaatgctaag
gaaataagcacatccaggctcagcaaagttttaactgttttaataaaaaa
aacgtgtacttcatTAAATCATGTAACAATATCTCTATAAAATTGCCTTT
TGATTGATGGGTTGAAGCCATTGCATAAGGGTGACCGGACTGAATTTTCT
AtagaatttcctaaggggggtctgaattttcaaatgtatttTCTAAGGGG
TTACCACCTAGGGATTCTCCCAATGTATTACAAGGTTTTCAGTACAACTA
ACCAAAGACAAAATGGAATTTTTAATACACTAATTTTGCACTAATTTTTT
GCCTGACCACTTTTTCTGTCCACCCTGTATGGCTCATATGGCTAAAGGAT
ATAAAAGTTATTTCTTATATCTATTAGCCTTTGAATATTTGTTTTTCACG
ATGTCTGCTAGTTGTATCTTACAAACCTATCTGAGAGCCATGtcaactga
gtatcaaaaaaccttgaaaaatgtcaccatttttgccaaaaagacttgaa
aaaccacttaaaaatgatcaaaacaaccttgaaaaccttgaaaatcccga
aagaaaatctatacttttttaaacattgatcCTGAGGAGGGAAATATAAT
TAGAAAATACCTCGTTGGATGAATAattggaaaatgaagatgaaaaatga
gcatgaaagaaaatcttttccgAAGACCCTTTTTACTTTGGCTATAAATA
AACCATCTGAGCCAAACAAATTCtttcaaagatgtttttcttcATTCAAA
TAAGGTTatcaaagttgaaataatcaaataaatgtaccgggtgacccaga
AATAATTCAGAATTTTGTTGGCTAGATCAGGCAGAAATTAACTTTTTATA
ACGCAATGGTgaaatgttaaaggttttgtttttaaataagagtgatatcg
tttgcttactcatcaattttaatcacAACTGTTTCACATTGGATAGGGAG
CAGGATTGGTCAgaaattggaaaagaaaaacatttttttgcttatatcag
cataatataacaataggcagatacagtcctggtatgaaatatgtgtctta
TATAAAACGGGatcacttatgtaaaaacaaaacctttaaacactggtcac
tttaaaaatattaaaaatattaaaagactTTAGCCTAGGTCATATAATTT
TTCAGTTGAAtccttttttctaattcagttGAAAAAAGACGAGAAAACAC
AAACAGAAGAGAAAGAGATCGCCAAGGGAGAAGTTGTCACCAAATTTCTC
ACAACAGAAAAagccatcaaaacaaaacgCGAAAATCCATTCAAAAGTGA
GAAAAGTGAAGACCAAGCTGGCCCTTCATGcaacaagaaaaacaaagaag
aggAAATCAAAACCATGAATATCAATACGAGTGAGTAAAGTTTCCTTTTG
GTTCGAAAGTTGATTCAAACCCTGCAAttatacgctttttataagaatag
tgtaatTTGCCTGAGggtaagcattattcttatctttctattgttctaaa
caataggcctatttttctaactctgaaatctcacccttttattcttatag
aagttattcttatatgTAGGTATTTGGTAGTGGGGTTAATTAGTATAAGA
AAACTGCAAATGGTTTTTTGACTCAATTTTGCACACTAACATTATATCAA
ATGTAATAACTTTTGGCCGAGAGAGGCAAAATTTATAGGGCCTTCATTAC
CCTTGGAAACCGAAATAACGGTTGTTCGAGTTTCCTTAGTAACGGGAAAC
TTTTtcgttaaaaaatgaaaatttgttcgTGCCAATCGAAAGAAcacaaa
tttttgataaattagttaccttatcggccctttttacgctggcCCTTTTT
GGCGTTATACTTGGGCTCGTGTCGtgataagggccggcgtaaaaggggcc
ggcgtaaaaagggccgataaggtatattaaACATGCTCGAATGTTTTGAC
TGTTTAAATTTTGTCTATGATGTCATTATTTAGTCCACTGCAATTTAAGG
CATATTTCAAAATGCCATggcttttctcaaaatttgcaaaagtgttctat
gatgaatttaaaaacttttggtCGAGAGGGGTAAAGTTTTGAAGTCCTAA
GTTACCCGTGGCAACGGTTTTGGCATTTGTAGTTTTCTAACAATCCAACA
TCGAGGAGGGTTGTCAAGCAACTTGGAAATCCTTTtgagaacttttgcaa
aattatGATACCtgtaatatttccttttggTTCGAGGGTCGATTCATATT
CATTAGAGAAATTATAAGTGAAAGTTCTCGTGCCACAAGTCTAGCCTCTT
CgtcagaattttcaaagaacCTTTTTATCCTTGATTAACATTACTTCGAG
TgagtagattttattttttagttccAGAGACTACGTTGTGGGCAGAGGGA
TCAAATAAagttggatatccagggggttcgatgattcaaaaaatcaatat
cctcaacagtggaagtaaaatctttttctggaaaagcacaTTATAACATT
TGTTTATTTCTATTAATCTTTCAGACGCACAGGAGAAGAAGAATCTTCCA
AGTTTTTGGATTCCCTCCCTCACACCACAAGCCAGCCAGTCACGAGTAGA
GAAGCCAGACAGTAAAGTGTACTGTCCCATGAGTGGCAAACCTATCAAAC
TAAAAGACTTAATTTCCGTAAAATTCACTCTGGCGCCTGCTGACGAATCA
GATAAGCAGAAATCGATTGTCGCTAGGAAACAGCGTTATATTTGTCCGGT
TACTAGGGACGTGTTAAGTAACACTGTCCGATCGGCGGTGCTGAAACCGT
CCGGTAATGTAGTTTCGATGGAATGCGTTGAGAAGTTTATAAAGAAAGAC
TGGGTATGTCCGATCACTGGacagaaattgaaagaaaaggaTGTCATCGA
GCTAAAACGTGGTGGAACAGGTTACTCGTCCGTTGGTAAAGACTCTCTTG
AAGGCAAAGCGTATGGGCCAACCATGATGGTCAGCTAG Coding sequence (CDS) from alignment at sc0000055_pilon:1126002..1132239+ >XLOC_036252 ID=XLOC_036252|Name=XLOC_036252|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1926bp|location=Sequence derived from alignment at sc0000055_pilon:1126002..1132239+ (Clytia hemisphaerica_ch_hm2_pilon)
aataagaaaaaacaacaacataatATGACACGCCATGGTAAAAATTGTAC
GGCAGGTGCTGTGTACACATATCATGAAAAGCAGAAAGACACCAAACAAT
CAGGATGGGGTTCGCAACAAGCTCGATACAGTAAAGACTCCATCAAAGAT
TTTGACTGCTGCTCATTGACTCTTCAGCCCTGCAAGGACCCAGTAGTGAC
AAAGGAAGGCCACCTGTATGAGAGAGAAGTCATACTGGAGTACATTCTTC
ACCAAAAACAAGCCaacaacaagaaaatgaaagcCTATGAAAAACAGaat
aagaaaaaacaacaacataatATGACACGCCATGGTAAAAATTGTACGGC
AGGTGCTGTGTACACATATCATGAAAAGCAGAAAGACACCAAACAATCAG
GATGGGGTTCGCAACAAGCTCGATACAGTAAAGACTCCATCAAAGATTTT
GACTGCTGCTCATTGACTCTTCAGCCCTGCAAGGACCCAGTAGTGACAAA
GGAAGGCCACCTGTATGAGAGAGAAGTCATACTGGAGTACATTCTTCACC
AAAAACAAGCCaacaacaagaaaatgaaagcCTATGAAAAACAGttGAAA
AAAGACGAGAAAACACAAACAGAAGAGAAAGAGATCGCCAAGGGAGAAGT
TGTCACCAAATTTCTCACAACAGAAAAagccatcaaaacaaaacgCGAAA
ATCCATTCAAAAGTGAGAAAAGTGAAGACCAAGCTGGCCCTTCATGcaac
aagaaaaacaaagaagaggAAATCAAAACCATGAATATCAATACGAttGA
AAAAAGACGAGAAAACACAAACAGAAGAGAAAGAGATCGCCAAGGGAGAA
GTTGTCACCAAATTTCTCACAACAGAAAAagccatcaaaacaaaacgCGA
AAATCCATTCAAAAGTGAGAAAAGTGAAGACCAAGCTGGCCCTTCATGca
acaagaaaaacaaagaagaggAAATCAAAACCATGAATATCAATACGAAC
GCACAGGAGAAGAAGAATCTTCCAAGTTTTTGGATTCCCTCCCTCACACC
ACAAGCCAGCCAGTCACGAGTAGAGAAGCCAGACAGTAAAGTGTACTGTC
CCATGAGTGGCAAACCTATCAAACTAAAAGACTTAATTTCCGTAAAATTC
ACTCTGGCGCCTGCTGACGAATCAGATAAGCAGAAATCGATTGTCGCTAG
GAAACAGCGTTATATTTGTCCGGTTACTAGGGACGTGTTAAGTAACACTG
TCCGATCGGCGGTGCTGAAACCGTCCGGTAATGTAGTTTCGATGGAATGC
GTTGAGAAGTTTATAAAGAAAGACTGGGTATGTCCGATCACTGGacagaa
attgaaagaaaaggaTGTCATCGAGCTAAAACGTGGTGGAACAGGTTACT
CGTCCGTTGGTAAAGACTCTCTTGAAGGCAAAGCGTATGGGCCAACCATG
ATGGTCAGCTAGACGCACAGGAGAAGAAGAATCTTCCAAGTTTTTGGATT
CCCTCCCTCACACCACAAGCCAGCCAGTCACGAGTAGAGAAGCCAGACAG
TAAAGTGTACTGTCCCATGAGTGGCAAACCTATCAAACTAAAAGACTTAA
TTTCCGTAAAATTCACTCTGGCGCCTGCTGACGAATCAGATAAGCAGAAA
TCGATTGTCGCTAGGAAACAGCGTTATATTTGTCCGGTTACTAGGGACGT
GTTAAGTAACACTGTCCGATCGGCGGTGCTGAAACCGTCCGGTAATGTAG
TTTCGATGGAATGCGTTGAGAAGTTTATAAAGAAAGACTGGGTATGTCCG
ATCACTGGacagaaattgaaagaaaaggaTGTCATCGAGCTAAAACGTGG
TGGAACAGGTTACTCGTCCGTTGGTAAAGACTCTCTTGAAGGCAAAGCGT
ATGGGCCAACCATGATGGTCAGCTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000055_pilon | genome | sc0000055_pilon:1126002..1132239 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 502-963:5777 |
| Aaloc | 298-498:4429 |
| Aaloc | 1-297:1 |
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