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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000377_pilon:96508..99457- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_036251 ID=XLOC_036251|Name=XLOC_036251|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2950bp|location=Sequence derived from alignment at sc0000377_pilon:96508..99457- (Clytia hemisphaerica_ch_hm2_pilon)
ATATACGGATCGGTCTTAGACGCAGAGATTATTTACAATGAACGTGGAAG
CAAAGGTTTTGGTTTTGTTACCATGGAAACAAGCGAGGATGCTTCAAAAG
CGAAAGAAGCTCTACACGGAAAAGAAATTGACGGGCGAAAAATTGAGGTG
AGAAAATGTTGTATTTTGTCCATTCTTTTAATGGAAATTTTTTCCTGGAC
AGTTTTACGTCATCTTCTTTTTAAACATTTTTGACATAACTGGCGTTTGA
AAAGTGCCCTCAACTTTGCGCCTACTCTTACACTTAGAATAGGCAGGGCG
AAAAGTGAGCCGTCTAAACTAGAGCTAAGATGAGGGAGTGACCTTAAGCG
CTAGTTTAGATGGCCACCTTTCTACCCTACCTAATATGGTTTTTAGAGTA
GGCAGAAAGTGGGCACAAAGTTGATAGTTAAAATCTTTGCTTGGAAAATA
TAAAAAAAAGTCATTGCATTGGCGTCAAACGAGGGCAATGCATTGACTTT
AGACAGCCCACTTTATGCCCACCTTAATTCACAATTAGAAAAGGCAGGGC
GAAAAGTGGTCCGTCTAAACTAGAGCTTAGAGATATTGGAAGATTCGAAA
ATTCTGACGAAAGATTCCAGTAACTGTTATTAATCAGTATTTTCTTATCT
TTTACTCAGGTCAACAAAGCAACTCCTAGGACTAACACTTCGAAAGGTAA
TGTTTGCTCATGTAGGTTAAAATGTATCGAAAACGAACCGTCCATTATTT
GTGCATTTAAACAATCTATAATATACTGTCTGTCGGCTTTAAAGAAGAAG
TCTGTAAAATACTTGACCGATGATTGCGACTAAAGACTACATTTCATTTA
AAGTTACAATACACTTTTATTTTATGAGAATATAAAGCTTTGGTTATAGA
ATAAATTTACACCTATTCTTGCCACAAATTCCAGAAACTACTAAGAAAAT
ACTACGGTTTCGATTTCATTTCTGAAAATGAAACAAAACAAAGAACGTCG
AGGCCTTGATTTTATTAGTAAAATAAGTACAATAATCTTGTTCAGAATTT
ACAGGCTGGCACACAAAAAGCCTTTATTTCTCGTATTTCATTACATACTG
ATTTATATTTCTTTTGAACAGTAACCCCCCGATTGCGAAACAAGTCGCCG
ATCGCTGCAACCACAGCCACCCCTGGTCTTCTCCAACCCACCGGTGCTGG
TCATCTAAACGGTGTCATTCGTCCGATTACCATGGCAACTCAGGCAGCTG
CCTACCCTGCAGCCTGGAATCCAGCGTAAGTAGTTTTTTTCTTGCTTGAC
TACAAGTTTAAGTACTGTCATATTTTTTAAATCTAAAATAATAAGTTTTG
TAAATTAATAGGAATGAAGTTTTTAAATTTGGCTGAGTTGTTTTTTCTGA
GAAAAATAAATTTCAAACAGCCAAATGCGAAATTATGGGACAAAAGCAAT
AGCTTGAAACCCCCTTGTCAAGAAATATTTCACTTGAAAACTATTTACAC
TTTAATCTTTTTTTTCTGTTTTTAGTTCGTTGACCGCCCTTTCTACACCC
TCCATACCGACTACCTTTCAACTACCGCCCTCTCCTCACCAACTTCTTTC
ATCCGCTATTTCAACCGGAACAATGCCGGGTACTGCAAATCCAATGTTTT
CGAGGTAAGAAATCCATTTTTGGTGTATACTCTCTTTCTGCTAAATCAAT
GTGTCTGCATAACTTTGGGGCAAACACCCCTGTCTCAGTGTCCCGGTGGA
ACATTTTCCCACATTTAGGATAAAAGTTTTTTTCCGAAATCTCACTGTAG
TAGAGGGCATTTTGTACCTAACTCGAGATATTGAGCTTCAAAAAGCGCAA
AATTTGGACAAAATAGCTGTTTCTGGCTAAAAAACACGGTTTTCAAGGGT
TAATATCTCGAGTTAGGTACAGAAATCACCTATACTTGCAATATATCTCT
AATCTTAATTTTTTGAGAGCTTTCCAAAAATATACAATAGGTCTCCGTTT
TCTCGAGCTAAAATTTTCATTAATTTTTAACCCTATGATTTTTGCCTGAG
ACCGTCATATTTGTCCGAAAATCACACCAAAGTGTCCGAATAAAAATTGG
AAACATCGTAATTTCGATTCCCCTACCCCTTAGCTTTCCAAAAATATATA
ACAAGTGCTTCTAACAAAACAATCGAGCGATTCCAAAAAATCGAACAAAA
TTCCCTCTACTACTGGGAATAGACAATTTTAAAGTACATTTTATTCCATT
GAACTTCGAATAGGGATGAAATCCCACCAGATCTTTGACACGGTGGTAAA
GGCATGGTATATCTCAAGACAAAACGGTCTTTTTCCATCAGAATGCCTTT
GTTTTAAACGATTCCTTTTCAATAAAAACTCAAGTATCAAATTGATAAGT
CTTCCAAATGGGTGAAAGAAGACGATTTTTCATGGATTTATCAACAAAAA
CATACCTAGACCTTGTGTAGTAAATCCCTATTGTTTGATTGAATTCTTTT
TGATTACTTTTCAGCTTCCCATCACCGTTTTACCCCACTCCCGTAAGTAT
TAATAAACATTTTATTGCATTTTAGAAAATATGAATCTATTTATATTCGA
ATTAAAATTTCGAAAAAATATACATATGATTGGTTTCGTAAGGAGCTTTT
ACTTTATACTACTTGTAGATAGAGTGTCCATTTTATGCTTTTCCCTGATG
CATAAATGGAATGTTAATTTCCCTATGTTTGCAAATTTTCTCGGAAATAC
ATCGTGTATTCCCTAGTACCGATGGAAAAAAACAAACTTATTTCTAACCC
TCCTTTTTCTTTTCACAGGAACAATACGCACAATATTACAACTATATCAC
AGGAGGTTCAAGTGTACCCGTCACACCCAACACAAATCAAACTGGTCCGA
TCCGAGCTGCCCCTAATACTAATATGTTCCATCGATTTCAACCATATTGA
Coding sequence (CDS) from alignment at sc0000377_pilon:96508..99457- >XLOC_036251 ID=XLOC_036251|Name=XLOC_036251|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1254bp|location=Sequence derived from alignment at sc0000377_pilon:96508..99457- (Clytia hemisphaerica_ch_hm2_pilon)
ATATACGGATCGGTCTTAGACGCAGAGATTATTTACAATGAACGTGGAAG
CAAAGGTTTTGGTTTTGTTACCATGGAAACAAGCGAGGATGCTTCAAAAG
CGAAAGAAGCTCTACACGGAAAAGAAATTGACGGGCGAAAAATTGAGATA
TACGGATCGGTCTTAGACGCAGAGATTATTTACAATGAACGTGGAAGCAA
AGGTTTTGGTTTTGTTACCATGGAAACAAGCGAGGATGCTTCAAAAGCGA
AAGAAGCTCTACACGGAAAAGAAATTGACGGGCGAAAAATTGAGGTCAAC
AAAGCAACTCCTAGGACTAACACTTCGAAAGGTCAACAAAGCAACTCCTA
GGACTAACACTTCGAAAGTAACCCCCCGATTGCGAAACAAGTCGCCGATC
GCTGCAACCACAGCCACCCCTGGTCTTCTCCAACCCACCGGTGCTGGTCA
TCTAAACGGTGTCATTCGTCCGATTACCATGGCAACTCAGGCAGCTGCCT
ACCCTGCAGCCTGGAATCCAGCTAACCCCCCGATTGCGAAACAAGTCGCC
GATCGCTGCAACCACAGCCACCCCTGGTCTTCTCCAACCCACCGGTGCTG
GTCATCTAAACGGTGTCATTCGTCCGATTACCATGGCAACTCAGGCAGCT
GCCTACCCTGCAGCCTGGAATCCAGCTTCGTTGACCGCCCTTTCTACACC
CTCCATACCGACTACCTTTCAACTACCGCCCTCTCCTCACCAACTTCTTT
CATCCGCTATTTCAACCGGAACAATGCCGGGTACTGCAAATCCAATGTTT
TCGAGTTCGTTGACCGCCCTTTCTACACCCTCCATACCGACTACCTTTCA
ACTACCGCCCTCTCCTCACCAACTTCTTTCATCCGCTATTTCAACCGGAA
CAATGCCGGGTACTGCAAATCCAATGTTTTCGAGCTTCCCATCACCGTTT
TACCCCACTCCCCTTCCCATCACCGTTTTACCCCACTCCCGAACAATACG
CACAATATTACAACTATATCACAGGAGGTTCAAGTGTACCCGTCACACCC
AACACAAATCAAACTGGTCCGATCCGAGCTGCCCCTAATACTAATATGTT
CCATCGATTTCAACCATATTGAGAACAATACGCACAATATTACAACTATA
TCACAGGAGGTTCAAGTGTACCCGTCACACCCAACACAAATCAAACTGGT
CCGATCCGAGCTGCCCCTAATACTAATATGTTCCATCGATTTCAACCATA
TTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000377_pilon | genome | sc0000377_pilon:96508..99457 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 496-627:133 |
| Aaloc | 469-495:436 |
| Aaloc | 340-465:1425 |
| Aaloc | 187-336:1828 |
| Aaloc | 148-183:2292 |
| Aaloc | 1-147:2951 |
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