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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000094_pilon:1068638..1071813+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_036220 ID=XLOC_036220|Name=XLOC_036220|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3176bp|location=Sequence derived from alignment at sc0000094_pilon:1068638..1071813+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCAATCTGGTCATTTGTCCCCTCGAACCCATggaataataaataattt
tccAGTTGAACTCGAATATATTCGTTTTCCAGAAAAGTTATTTAAGACAC
AGGTATGTACAAGACTTTTATTTTACcacattttatttgaatttgacTTT
GTCTTAAATTAAACGTGACAAGAATAGTTTAAGATTCACTACGATTGGGT
ATTTAGCTGAGTTGGACAAGGTTGCTGGTTCAATTTTTACTTGGGATTTT
ACCAATGATTTGAAAGTAGCCTCTTTACTATGATAAAGCCGATAAAGGGT
TATAAAGATAATGTTGAataatccagggagaaagagtagtgaaatcttat
gtttttttttaatgcaaGCTTCTGCctcttggtcaggctcgtgtatgctt
aagttctcagagcatccaggcatagcctatgcttatcatatgcttatgaa
tcatgcttatgattcaccccgagccaagatttgtaaaaatttgcTCAGAT
ATTTTGGAGCAGTGGAATCTAGCTAGCCGTgtaatgtcaattttttgctt
gacctctaacaaacctttttaaacaaataaaaaatgacttgaaaaatatt
tcaggctgacatattTATgctatgttatgcttaggaattctgcaaatcgg
agccttcatatgcttgtAAGTGTTATGCTCATAAAGCATGTATTCACTGA
TTAATAGCATTCATTCActtccatttttttttctttttcatagaaaagaa
tcaGAGGAAAATCTGAACAAAGAATCCAGAAAAGCATTTTGGAATTTGCT
CTGGACTTTCTGGATCCTGTCACATTAAACCTGGTTGTCGTCCATAGTAT
ACAAGTTTACATAAAACGAtctaaagaattgaaaaatacaCCAAAATATG
TTGGAGCTATCCAATTACAACCTAAATCTATAACTCCTGTTGATGGAACA
TTTAAAGTACGTTTACTTTTCATTTAATTTGGTATTAGGATTGTTGGATT
AAGGCTtggggagaattttttttcgtgttggtgcaatgcaacatgctcca
tccctccaacacaagaaaaaaaagtgtGCGTGTCTCATGATTTCTTTgat
tgtttcatgggacaaaaagtgagggaaatacccaaaagacacgcgctgat
tttgtccctgggacaaaagtgaaagacgcacaaatgttattaaaagtgtt
gtcgatttcacttttatttttcttatttaaagaaaaatggggtgggcACA
TACGagaaacttctcgtgtccccaagcctttagtcTTTGAAcataagaat
aatttaagaacaatactAAACTTGAATATTAAGCACACCTAAAGGACCAC
ATCCCCTTTGATAGGTTTTTATATAAGGGGTGCGTATCATGTATCAAATT
cctgtccgagagttaccccaaattgaattgaaagaaagaaagaatttttt
ttcgcctgcaTTAAGGAAAGGATACAGAAACATAGAATATGGGAATAAAA
TAAATAAGGCCAGGAAATTACCATCCAATAGATGCAAGCATCTAACCTAT
GTGATGGCAACCTGCTGGACTGATGAATATTAAGATGTTAAAATTGATAA
AGTATGGAAATACCTAATCATAAATATGTATAAacagttttaaaaacttt
taaaaactaaaTTCGGGGTAGCCTATTTCAATTTTCTGcttaaaaaagtt
tagaaattcaatgattgtattaacctcctgccattcaaaaattttatgac
atttaaagatctctcataaaaaaaCTCTACTGatcaagctaatcaagttt
ttaaaactcaaaaacacaaagacgggggtaactctcggacgggaattttt
ttggaCATCCCCTatttcaaaacatatcagaggggatgcgtgcagcctac
taCAGTAATAGGAACAGCCAGAATATTCTtgacattcttagcttttttgg
tctaaatagtaaaaaaaaatcgcTTACTGATGTTCATTCTTGTCTAAATC
GTAATGGATTTGACATAATTTCCAACTTCACATGGCTATTTCTCTTTGTG
TGTTTAAGTACAAGACTTGTAGTATACTTTTTAAGCTCAAAATTTCATCC
TCCATTCGATGATAATAACCATTTTTATAGtatgttctttataaaaaatc
tATACAGGGGTGGTGGACGAACCTTTGcaagtcaaaacaaatttttggac
gaactaaaatcagtcatacaccccctggaaattttagaataactttctat
ttcctggaaaaatgaaaaaagaacttCTTATTTAGACTCCCTGGAAATTC
TTTTCGGGCTATCCCCTGAGAatttcgtccacccccccctgCGTTGATGT
AAAATAGAATGGCCCATTGAATTCGACTTTGAAAGCCTGAACTAGTCTTG
AACTAGGTAACCACATGCGTTTGCATCGTAACAAAGATGCTACGCATTCT
AAAGGTTGGCTTATAAATAGTATTAAAGCAAATTTTAactatttgttgtt
tttcttctaGTATCTCATCAAAGTGGATTTAGACTCTGTCTATGAAGTTG
ATGGCAAGAAAGTATATCAATTACAAAAGACAGCAACCGAAGAACTGAAT
CTGTTTCATTTGGTGATACAAATATGTCTTGCCGATGGTCGTTCAACATG
CTTGCAAACTAAAGAGTTATTATTGGTCGGCaaaaaaaCAGCTGCTGCAG
GTTTGTCTATTAGAAAACgaaatcaaaattgataaaaacatcCCTGCAAG
TTTCTTATAATGTTCTTCCCTGCCCAATGATCTTCATACCCTGGACATTT
CTCGATGTCGTATGTCGATCTGAGCCAAGCAGAATCTTTGACTGGAGATT
TTTCAGGAGAGAGAGTGTTTACTCTAACGTGATGTGTgggtgaaaaaata
tttttcaaatgtttccttAATTCGAACCAAAAAATTGATCCGCTGAGTTG
GACTGTAAAGTAAGAATacgctctgtaattcgaatctatctgtaattcga
gaataattcctgaccccttgaagatcgaaatagagaagatcaactttagt
tttttttcctttacttttttgtttttattattgactttttttataGAAGC
GTCATGTTTTGTTCCTTCTCCACCAACCGGTCTTGCTGCTTTGGAGCAAA
GAAGAGACAGCTTTAGCTCAGGTATG Coding sequence (CDS) from alignment at sc0000094_pilon:1068638..1071813+ >XLOC_036220 ID=XLOC_036220|Name=XLOC_036220|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1170bp|location=Sequence derived from alignment at sc0000094_pilon:1068638..1071813+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCAATCTGGTCATTTGTCCCCTCGAACCCATggaataataaataattt
tccAGTTGAACTCGAATATATTCGTTTTCCAGAAAAGTTATTTAAGACAC
AGATGCAATCTGGTCATTTGTCCCCTCGAACCCATggaataataaataat
tttccAGTTGAACTCGAATATATTCGTTTTCCAGAAAAGTTATTTAAGAC
ACAGaaaagaatcaGAGGAAAATCTGAACAAAGAATCCAGAAAAGCATTT
TGGAATTTGCTCTGGACTTTCTGGATCCTGTCACATTAAACCTGGTTGTC
GTCCATAGTATACAAGTTTACATAAAACGAtctaaagaattgaaaaatac
aCCAAAATATGTTGGAGCTATCCAATTACAACCTAAATCTATAACTCCTG
TTGATGGAACATTTAAAaaaagaatcaGAGGAAAATCTGAACAAAGAATC
CAGAAAAGCATTTTGGAATTTGCTCTGGACTTTCTGGATCCTGTCACATT
AAACCTGGTTGTCGTCCATAGTATACAAGTTTACATAAAACGAtctaaag
aattgaaaaatacaCCAAAATATGTTGGAGCTATCCAATTACAACCTAAA
TCTATAACTCCTGTTGATGGAACATTTAAATATCTCATCAAAGTGGATTT
AGACTCTGTCTATGAAGTTGATGGCAAGAAAGTATATCAATTACAAAAGA
CAGCAACCGAAGAACTGAATCTGTTTCATTTGGTGATACAAATATGTCTT
GCCGATGGTCGTTCAACATGCTTGCAAACTAAAGAGTTATTATTGGTCGG
CaaaaaaaCAGCTGCTGCAGTATCTCATCAAAGTGGATTTAGACTCTGTC
TATGAAGTTGATGGCAAGAAAGTATATCAATTACAAAAGACAGCAACCGA
AGAACTGAATCTGTTTCATTTGGTGATACAAATATGTCTTGCCGATGGTC
GTTCAACATGCTTGCAAACTAAAGAGTTATTATTGGTCGGCaaaaaaaCA
GCTGCTGCAGAAGCGTCATGTTTTGTTCCTTCTCCACCAACCGGTCTTGC
TGCTTTGGAGCAAAGAAGAGACAGCTTTAGCTCAGGTATGAAGCGTCATG
TTTTGTTCCTTCTCCACCAACCGGTCTTGCTGCTTTGGAGCAAAGAAGAG
ACAGCTTTAGCTCAGGTATG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000094_pilon | genome | sc0000094_pilon:1068638..1071813 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 508-585:3099 |
| Aaloc | 316-504:2511 |
| Aaloc | 103-315:744 |
| Aaloc | 1-102:1 |
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