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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000038_pilon:1638172..1644241+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_036159 ID=XLOC_036159|Name=XLOC_036159|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6070bp|location=Sequence derived from alignment at sc0000038_pilon:1638172..1644241+ (Clytia hemisphaerica_ch_hm2_pilon)
atgtcttcctcccaaagaagaaaaatttctaaagtaaagaaaaCAAGTGG
CGAGCATCATcaagaagaatcaaatattgtTGCAAATAGATACTCTGTCA
CCAAGAAACTTGGTAGTGGCAGCTATGGCACTGTTTTTGTTGTTTCAGAT
TTGAAAACTTCTGAGGCTGAGTAAGCTATTATGAGattcaataaagaaaa
tatttttgcttcaaAGATCTTTAAATTACAGTATCTTTTGATTTCTCCCT
ATTTTAGAATATTTCAGCACTTTCCGGGTTTATCAAGATTGATTCTTTCT
AAAGGCTCGAAATTTCTACtactttttgataaatgatatttttaagCAGA
GAAATTTGGGGAGCAAAGGAGCTGTGCATACCCTTACTAAAGAAACTGGA
GGCTTTGGGTCTCTTCTGGCTGCTAGCATTATAATGTTAATATAAcatgt
tttcttctttctttctcatcgttaacttttttgtttttttagaaaagttt
tgAAGAAGATCCACATTGGTGATTTGGAGCCCAATGAGACGATCAGTGCA
GTCAGTGAAGCACGTTTGCTTTCTAAGGTATGTTGAGATATTTTAGATGA
TATGAAGGGTGTAAGCGGTTTTAGTCACTCCagcaggctgcatcatttga
aaattccaggcgtgtggtcaatTACACTTCTAAAGCCTTAATTTTAGTGT
AGGTGTACGTGATAAGCAGTGCTATGCACAACTTTCAGTTGTGAAAGTAA
CTTTATGGGGTATGATTGATCACACTCCTCGTATACATTGCATTGCACAT
TTACTTACTTTAGGTGAGTGTGGAGGTGTGCGTGTGCTATCGCCCGCCTC
GAAAGATGCAGCCTGCTCCAGCTAGAAAGCTaaaatatgatgaaaaaaaa
caaatcttgaaagtaaaagctttttgtaATTGTAAATATTACGTTATTTT
CTTCTCAGCTTGACCATCCTGGTGTTGTAAAATTTCATGATAGTTTCATT
GACCGAGAATTCTTCTGTATCATCACAGAATTTTGTGAAGTGAGTGTCTA
CATTATGACTGGCAGCTGATTCAGCATGACTAAACTATGACCAATATTCC
CAACgacagttgagctagaatccgAGAATGTTTGTCCAAAAAGCGTTATA
TATCCTACTACTAAGGGTTGCTCTCCTTACGAAAGAAATATTTGTCTTGT
ACCTTCCCAGTGCTCTTTGCCTGTAACCAAGTCTAAAATTTATTCTCTAC
TATTTCTTAGGGTGGTGATTTGGATGTCAAACTTCATTCATGGAAGAAAT
CAGGGAAATCAGTAGACAGGACACTGGTCTTGACATGGTTCGTCCAGTTG
ATTGTGGCAGTGCAATATATTCACCAACGTCGCATCTTGCACAGAGATTT
GAAGACACGAAACATCTTCTTAAAAAACAACATTGTGAAAATTGGTAAAA
GACTTTCTtaaacaaaaatgaattttgaaataagagaaaTTGAGACTTAT
TAAAGCCAGGAAATTGTGTTTGATCTTTCACCTACAAGTAAAGTTTTGTA
CTACAAAGTCGTTGGTTTCTTAACTTCATTTGTGATCACTGAATTAAAAA
GTGGATCTTTGACCACTATTTTGTTAtcattgttttctctttttcattta
ttttaccAAGTTTACCCTTAACTTGATTATTTTCAGGTGATTTTGGAATA
TCACGTATATTGGAGGGTTCAACGGACATAGCGACTACATTTACTGGGAC
GCCATATTTCATGGCTCCTGAAATTCTAAAACATGAAGGTTATAACTCAA
AGTCGGACATATGGTTAGCCTGGTTTTTATTCCTCTTTTAAGTGGACTAT
ATAATATCTCAAGTTTCCTTTGGGATGATTAATAGCATAGCAGCTTTGTC
ATAGCGTACTTTATTGTTACGATGACACTTAATGATATTTATTTAGTCAG
TGACTTAATTGGAGCAATACTGATTGCAAGAATTTTATGTTTACTTTGAC
ATGAAAACCGTCATCAATCTTGAAATTATTTTAGCTTTCTCATGATTCTT
TTTGAAGGTCACTTGGTGTCATTTTGTACGAGATGTGCACGTTGAAGAAA
GCTTTCCAAGGGAATGTAAGTACAACAAAATTATTCATTAAATTTCTACT
AGAAAGATACTTGGTCTAACTGTGGCCACTTTAATTTCAAAAAGCTCTCC
CAAATCTTCTCAAAAAGTATACACGTTACTACCAAAGAGGGTTTATCGGA
ATATTCGTCAATAATGCTacgatttcaaaagatttgtagTGTAAATGAGG
CTCGTACAACCTATTTGATATTTtaacatttattttgttgaaattatAGA
ATCTGATGGCAGTGATGAAAAACATCGTCCATGGTGATATCCCGAAACTT
CCCTCCAAATTCAATGCTGACTTACATCTCATCTATGAAAGGTACCAAAT
GCAGTTTTCATAGCTCCATGTATTACAATTTCCAATTCTGAAATTTCCCA
AAAGAAGATGACTCGTTACCTTTAAGGACCTGATTTTGGCGagaaaaatt
caccaaaattaaaatttgcctTGCCAACAGTTGCCAAAAGCATAGTAtaa
actttttcacaaaattcccAAATAAATTGCCCCTAATTTCGCCAAATTTG
AGAAATTGTCATAAGTCGAAAAAATAAGTGCTCGTCAGAGCAGCAGTATC
GCTTTTTTATTTGAAGGGAGAAAGAGTGCCTATTTTCGGGTAaaaagcta
tcgaaagaggagccttccgCTCGCCTCCGACTACAAACTtacttaatttt
caaagactAGTTTTCACTTTCCTGAAAGACACTAGAAGTGAAGAAAGTGT
GTTTTTTCTGTAATACCCCTCTAACACCTTTTGTTTCTTCGTAGCATGTT
GTGCAGAGATTCCGGTAAACGTTCTTCAGCAACTGAAATCCTCAAAAAAC
CTTACATTATGCAGTATTTGGAGGTAAAGTGAAAAAAGAAagttctgtaa
ttcgaactgaaaCAGCATCACATTAGAAAGAATACTGCGTCTTATCCCCG
CCCTCATTCTCCGTGTTAAATAGAGAACTGTTGAGCAATGAAACAGATTG
GTGTATGGAGGTCATCTTTTTGAAGATTATCATAGTGGGTAGATTTGATT
CATTATTCATTTGAAtcaaggaattttttttgaatcgaTTTTTCTTTAGT
TATTCACGTTAATTTCGattaaaaaatatcatactAATTTAGATCGTGGC
TAAAAGAGTTAGTTTCTCAAATGTTAAATGATAGATATTAtaagatgttt
ttttcttttcatactaACTTATCTATTACTGAATCTTTTGTTATTGATTT
GCATGAAATTTCCCAAtctcttcattttcagaaaCTGAAGTTGAAGTTAA
GTGGAAACCGCACCATTGATCGTAAGATCGCTAAGCGTGAGGCCATGGAA
ATAGCGGACGCGTTATCATCAGGTGAGAAATGCAGTAAATCAAATGTAAA
AAGACGAGGAGATAGACTTTTACCTGGGTTGAATAATAACCAACGACCGT
TGACGCCCAAAGAATTAATGAAAATACGGAAACAGCAGCGCGCTGACGaa
gaattagaaaaattaaagaaactgACTGTGAAAACTTACGCGGAGAGTAG
AAGGGAATGCACTGATATCAAAAATCGTCTTGAACACGCTTCTGCTGAGA
ATGAGAAAGATGAAAATGTACACAGCTCTCCAAGAGAAAATAATCGAGAC
GTTGATAAACTTTGTAACATCGAAATGAATATAATTGAAGCTACAGAGGA
CGAGAGAAGGAGAAATTTACCTTTCAAAAGAGATGACAGTTTAGAAGTCT
GCGAGCTTCCAGCTGATGATGTATTCGAGTGTGGTGGTGGTGATGAGCGG
GCGAAATTAGATCGCGCGCATATTTACACGCATTGTTTTGgtgaagagga
agaagaaacTCAGCATCACGTAAGGAAAAAATTTTTAGCGTCATAAcacc
ccccttctcacagacccggtgggattttatctttaagtgaatgaaaaaat
aaccaacCACAAGTCGATGGGTATTAATATTCCCAtttttttattgctgg
ggatttgaattacaTTGTTTTATAGCCAGGAAATTCAGTgtggatggaaa
aaatagcacaatatattgcagtgaggatttgctcaTCTGATTATTTTGAG
CGGAAACAAAACTTAGAGAGTATAATTTTCAACCGGGaacgatattttga
ccaatttttccagtggaagaGTTTCTAATAGTTTGGGGGAAGGGGTGTGT
TATAGTCATTCCTAGTTCTTATATTTGAGCATACCCTTGTTGAAATAATC
CTAGTTTAAcagtaaaggccggtctccacttgctcGAGCTTCAATCACAC
TCTTTCGAGCAAATCTttcacgctattggtcaaaagaaaaatgaagtaac
tccattggcgcgatcttacgtaacggttgaaaaagttgaaatgtattcaa
cttttttttcgagcgtgCGCTacgtttttatgacgtaatcttttttccaa
gccaaaagaattgaagccaaaagttgcgatcgcagcgcgcgcaaatggag
accggccttaagactATCTTAACATATTGTTATCCTCCAGTATGATTACT
TATAATCGACTACACACCAGTTTTGATTGAATATAACGGCAATATTAATC
AAAACGTAAggattttttgtctgttttttttctcagatgAGAAAATACAC
TCATTGTTTTGGTGCAAGTAGCTCTGAAGATGAACAAGATTGTATTTCGA
ACACATTGGTGGTGGACCAAAGCGAAGATGGAGTGTTTAGTGGAGAAGAA
GACGAAGATGTTGGTGATGGTAAGATATCTTCTAGCTGCCAAATAGTTct
ctcattggttgattttccACTAAAAGGTCCTCAATATGAGAAATTCCTTG
GTATTTTTCCCCAGGGaaatctcattttcattttcagacgACTAGGGACA
CTGTCTTATTTGTATCTCCTGGATCCCTCCGCCGCCGCTTaaaattatat
gattttttGGGTAGCAGAAAGCCTAAGATATCACATGATGATTTTATCAT
GAGCTGGTGATGAAATTTAGAGAAATATATCGTACCTTCTCTTTGCAGAT
ACGAACGACCTAACAAACGTCAGCTCCATACCCGAAAGCGCCGACCTTGC
CGACACGTATTACTCAAATTATGACGATTTCGAATCCGATGTCAGCAGTG
ACGATGATGATGAGGAACTCTCTGCCTCTGACGAAAGCGACGCTGACGGG
AAAACGTCAGGTGATTATGATGCCCTTGTCGGTTGTATGGAAAACGCTTT
AGATCTTTCAGAGGAAGATGTACAATCCACATTCGGTGACAGTTTCCCGT
CGCTAAATGCGACATCCAATGGATTACCCATTCGTCAACAGAAAATACTA
AAGTTGAGAAAGTAAGTAATCATTGAGTGATTCGTCGTTAAAAGGAGGTT
AACCCTGCACAATAATGCAATAATGTTTCTACTGTATATAACTTCCAAAT
GACTTGAAATGGAATTTTAATGTTTAACGTGTTGACCATGATACCCCTGT
CTCAGCTGCCCTCGGCTGTCCTCAGTGACCCTTAAGGAATTCTTTGCTCA
GTGAGAGTATGCTAatgaaaacagctattttggGGGGATTTTAGATTCTA
TTGTTTACAGTCCTTAGATTTAGTGGATCTTTAAGTTAGTGGATGAAATT
CAAGGGATGAATCGATATATATTTTCCGAAAGAGGTTTGAAATGGGGATG
TCTAAAGGAACGTCATGTCATTAACGCTTTATGTTTTCATCTGAACTAAA
TTTCATTTCCAGGGAATGTATTGGTTTACTCGGCGAGGAAGGCTTTCACA
AAGTGTACGAATATCTGGACAAAGTTCGTTTCTCAGGGCAACGCACTGTC
AGTGAGGATACCATTATGAAAAGATTGCGTAAGCTTGTCGGTTCGTCACG
TGATTGCTTTTTGGTCGACCAGTTGTTGTTTTTAGAgaaacaaaatgaaa
tcttCGGCGAAACGTTTTAA Coding sequence (CDS) from alignment at sc0000038_pilon:1638172..1644241+ >XLOC_036159 ID=XLOC_036159|Name=XLOC_036159|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4236bp|location=Sequence derived from alignment at sc0000038_pilon:1638172..1644241+ (Clytia hemisphaerica_ch_hm2_pilon)
atgtcttcctcccaaagaagaaaaatttctaaagtaaagaaaaCAAGTGG
CGAGCATCATcaagaagaatcaaatattgtTGCAAATAGATACTCTGTCA
CCAAGAAACTTGGTAGTGGCAGCTATGGCACTGTTTTTGTTGTTTCAGAT
TTGAAAACTTCTGAGGCTGAatgtcttcctcccaaagaagaaaaatttct
aaagtaaagaaaaCAAGTGGCGAGCATCATcaagaagaatcaaatattgt
TGCAAATAGATACTCTGTCACCAAGAAACTTGGTAGTGGCAGCTATGGCA
CTGTTTTTGTTGTTTCAGATTTGAAAACTTCTGAGGCTGAaaaagttttg
AAGAAGATCCACATTGGTGATTTGGAGCCCAATGAGACGATCAGTGCAGT
CAGTGAAGCACGTTTGCTTTCTAAGaaaagttttgAAGAAGATCCACATT
GGTGATTTGGAGCCCAATGAGACGATCAGTGCAGTCAGTGAAGCACGTTT
GCTTTCTAAGCTTGACCATCCTGGTGTTGTAAAATTTCATGATAGTTTCA
TTGACCGAGAATTCTTCTGTATCATCACAGAATTTTGTGAACTTGACCAT
CCTGGTGTTGTAAAATTTCATGATAGTTTCATTGACCGAGAATTCTTCTG
TATCATCACAGAATTTTGTGAAGGTGGTGATTTGGATGTCAAACTTCATT
CATGGAAGAAATCAGGGAAATCAGTAGACAGGACACTGGTCTTGACATGG
TTCGTCCAGTTGATTGTGGCAGTGCAATATATTCACCAACGTCGCATCTT
GCACAGAGATTTGAAGACACGAAACATCTTCTTAAAAAACAACATTGTGA
AAATTGGGTGGTGATTTGGATGTCAAACTTCATTCATGGAAGAAATCAGG
GAAATCAGTAGACAGGACACTGGTCTTGACATGGTTCGTCCAGTTGATTG
TGGCAGTGCAATATATTCACCAACGTCGCATCTTGCACAGAGATTTGAAG
ACACGAAACATCTTCTTAAAAAACAACATTGTGAAAATTGGTGATTTTGG
AATATCACGTATATTGGAGGGTTCAACGGACATAGCGACTACATTTACTG
GGACGCCATATTTCATGGCTCCTGAAATTCTAAAACATGAAGGTTATAAC
TCAAAGTCGGACATATGGTGATTTTGGAATATCACGTATATTGGAGGGTT
CAACGGACATAGCGACTACATTTACTGGGACGCCATATTTCATGGCTCCT
GAAATTCTAAAACATGAAGGTTATAACTCAAAGTCGGACATATGGTCACT
TGGTGTCATTTTGTACGAGATGTGCACGTTGAAGAAAGCTTTCCAAGGGA
ATGTCACTTGGTGTCATTTTGTACGAGATGTGCACGTTGAAGAAAGCTTT
CCAAGGGAATAATCTGATGGCAGTGATGAAAAACATCGTCCATGGTGATA
TCCCGAAACTTCCCTCCAAATTCAATGCTGACTTACATCTCATCTATGAA
AGAATCTGATGGCAGTGATGAAAAACATCGTCCATGGTGATATCCCGAAA
CTTCCCTCCAAATTCAATGCTGACTTACATCTCATCTATGAAAGCATGTT
GTGCAGAGATTCCGGTAAACGTTCTTCAGCAACTGAAATCCTCAAAAAAC
CTTACATTATGCAGTATTTGGAGCATGTTGTGCAGAGATTCCGGTAAACG
TTCTTCAGCAACTGAAATCCTCAAAAAACCTTACATTATGCAGTATTTGG
AGaaaCTGAAGTTGAAGTTAAGTGGAAACCGCACCATTGATCGTAAGATC
GCTAAGCGTGAGGCCATGGAAATAGCGGACGCGTTATCATCAGGTGAGAA
ATGCAGTAAATCAAATGTAAAAAGACGAGGAGATAGACTTTTACCTGGGT
TGAATAATAACCAACGACCGTTGACGCCCAAAGAATTAATGAAAATACGG
AAACAGCAGCGCGCTGACGaagaattagaaaaattaaagaaactgACTGT
GAAAACTTACGCGGAGAGTAGAAGGGAATGCACTGATATCAAAAATCGTC
TTGAACACGCTTCTGCTGAGAATGAGAAAGATGAAAATGTACACAGCTCT
CCAAGAGAAAATAATCGAGACGTTGATAAACTTTGTAACATCGAAATGAA
TATAATTGAAGCTACAGAGGACGAGAGAAGGAGAAATTTACCTTTCAAAA
GAGATGACAGTTTAGAAGTCTGCGAGCTTCCAGCTGATGATGTATTCGAG
TGTGGTGGTGGTGATGAGCGGGCGAAATTAGATCGCGCGCATATTTACAC
GCATTGTTTTGgtgaagaggaagaagaaacTCAGCATCACaaaCTGAAGT
TGAAGTTAAGTGGAAACCGCACCATTGATCGTAAGATCGCTAAGCGTGAG
GCCATGGAAATAGCGGACGCGTTATCATCAGGTGAGAAATGCAGTAAATC
AAATGTAAAAAGACGAGGAGATAGACTTTTACCTGGGTTGAATAATAACC
AACGACCGTTGACGCCCAAAGAATTAATGAAAATACGGAAACAGCAGCGC
GCTGACGaagaattagaaaaattaaagaaactgACTGTGAAAACTTACGC
GGAGAGTAGAAGGGAATGCACTGATATCAAAAATCGTCTTGAACACGCTT
CTGCTGAGAATGAGAAAGATGAAAATGTACACAGCTCTCCAAGAGAAAAT
AATCGAGACGTTGATAAACTTTGTAACATCGAAATGAATATAATTGAAGC
TACAGAGGACGAGAGAAGGAGAAATTTACCTTTCAAAAGAGATGACAGTT
TAGAAGTCTGCGAGCTTCCAGCTGATGATGTATTCGAGTGTGGTGGTGGT
GATGAGCGGGCGAAATTAGATCGCGCGCATATTTACACGCATTGTTTTGg
tgaagaggaagaagaaacTCAGCATCACatgAGAAAATACACTCATTGTT
TTGGTGCAAGTAGCTCTGAAGATGAACAAGATTGTATTTCGAACACATTG
GTGGTGGACCAAAGCGAAGATGGAGTGTTTAGTGGAGAAGAAGACGAAGA
TGTTGGTGATGatgAGAAAATACACTCATTGTTTTGGTGCAAGTAGCTCT
GAAGATGAACAAGATTGTATTTCGAACACATTGGTGGTGGACCAAAGCGA
AGATGGAGTGTTTAGTGGAGAAGAAGACGAAGATGTTGGTGATGATACGA
ACGACCTAACAAACGTCAGCTCCATACCCGAAAGCGCCGACCTTGCCGAC
ACGTATTACTCAAATTATGACGATTTCGAATCCGATGTCAGCAGTGACGA
TGATGATGAGGAACTCTCTGCCTCTGACGAAAGCGACGCTGACGGGAAAA
CGTCAGGTGATTATGATGCCCTTGTCGGTTGTATGGAAAACGCTTTAGAT
CTTTCAGAGGAAGATGTACAATCCACATTCGGTGACAGTTTCCCGTCGCT
AAATGCGACATCCAATGGATTACCCATTCGTCAACAGAAAATACTAAAGT
TGAGAAAATACGAACGACCTAACAAACGTCAGCTCCATACCCGAAAGCGC
CGACCTTGCCGACACGTATTACTCAAATTATGACGATTTCGAATCCGATG
TCAGCAGTGACGATGATGATGAGGAACTCTCTGCCTCTGACGAAAGCGAC
GCTGACGGGAAAACGTCAGGTGATTATGATGCCCTTGTCGGTTGTATGGA
AAACGCTTTAGATCTTTCAGAGGAAGATGTACAATCCACATTCGGTGACA
GTTTCCCGTCGCTAAATGCGACATCCAATGGATTACCCATTCGTCAACAG
AAAATACTAAAGTTGAGAAAGGAATGTATTGGTTTACTCGGCGAGGAAGG
CTTTCACAAAGTGTACGAATATCTGGACAAAGTTCGTTTCTCAGGGCAAC
GCACTGTCAGTGAGGATACCATTATGAAAAGATTGCGTAAGCTTGTCGGT
TCGTCACGTGATTGCTTTTTGGTCGACCAGTTGTTGTTTTTAGAgaaaca
aaatgaaatcttCGGCGAAACGTTTTAAGGAATGTATTGGTTTACTCGGC
GAGGAAGGCTTTCACAAAGTGTACGAATATCTGGACAAAGTTCGTTTCTC
AGGGCAACGCACTGTCAGTGAGGATACCATTATGAAAAGATTGCGTAAGC
TTGTCGGTTCGTCACGTGATTGCTTTTTGGTCGACCAGTTGTTGTTTTTA
GAgaaacaaaatgaaatcttCGGCGAAACGTTTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000038_pilon | genome | sc0000038_pilon:1638172..1644241 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1912-2118:5864 |
| Aaloc | 1600-1908:5151 |
| Aaloc | 1465-1596:4737 |
| Aaloc | 877-1464:3382 |
| Aaloc | 799-876:2896 |
| Aaloc | 706-795:2350 |
| Aaloc | 649-705:2059 |
| Aaloc | 523-645:1689 |
| Aaloc | 337-519:1261 |
| Aaloc | 256-336:959 |
| Aaloc | 172-255:494 |
| Aaloc | 1-168:1 |
|
