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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000743_pilon:16056..17788- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_036152 ID=XLOC_036152|Name=XLOC_036152|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1733bp|location=Sequence derived from alignment at sc0000743_pilon:16056..17788- (Clytia hemisphaerica_ch_hm2_pilon)
CAGCAATCAGAACAAAAGAAAGATCTAAAAGAAGTCGAAGACAAACTCGG
GGACGTTCGATTGAAAACACCTGACGATAAAAACAACAACACCCCCGGTG
GTAACCAGGGCAACAAGAAAACCATGGAAACAGAAAATGGCGACGACAAC
AAGTACAACTGTCTCGGAAACTTCGAAATCCAAAAACGTATAGGAAAAGG
TCAATTTTCAGAAGTCTTTCGTGCACGCTGCTTGATCGATAACAGTATTG
TAGCGCTGAAGAAGGTGCAAATCTTTGAAATGATGGATCTAAAGGCGAGG
AATGATTGCATCAAAGAAATTGATTTGCTCAAATCCTTAAATCATCCCAA
CGTTATTAAATATTTGGCCTCATTTGTGGAAAACAACGAACTGAACATTG
TGTTAGAATTAGCCGATGCTGGCGATCTATCCAAAATGATTAAACACTTT
AAAAAACAGAAACGTTTGATCCCAGAGAAAACCATCTGGAAATATTTCGT
CCAGATCACAGCAGCTCTCCAGCACATGCACATCAAAAGAATCATGCATC
GAGATATTAAGCCTGCCAATGTCTTTATAACTGCTAGCGGTATTGTCAAG
TTGGGTGATTTGGGTCTTGGACGTTATTTCAGCTCACAAACGATAGCTGC
ACATTCTTTAGTCGGTAAGAATCAGCCTTTTTCACGTAAACATGATCTTA
TATCACCTATGAACATTACAAAACATATTTTATGGGGCATGGGGGGAAAT
CTTTTATAGAGATACGCTTGGGGATCGACGAGCCTTTTCGATATTAGCTC
TCTAGTACTATCGAACCCTGAAGCAAATTTCATACAAACAATTTAATCTT
CTCCCATAATCGGAAAAAAATGTTTAGGCTTTTGAAAACCCCCCAACAAA
ATGAATTAAATGATAAATAGCAGCTCGACGCTAAATTCTTTTTTTGTCGG
TTATAATTTCATCTGTAAAGATTTGTTAAGTGGGCCGTAAACTGTAAGCT
GTCTATGATTTCCTCATTCATTTATCGGAAATGTAGTGTATTCATGTTAC
ATTTTGATGTAACAGATCTACATGACGTGTTGATTGATTTGTTACATCGT
GAAAAGCGTAAAAACTTAAACGTAAAACTTGGATCATCTTTTAAGATAAT
TTCCTGATACGATTTTTGGGTTTATTTTTCCAATGACGCATTATCTCATC
CCTATCTCGTCATACTAAAGGGTTAACGAGTTCCTTGGCAGTCAGTAATA
TCCCTGCCCATGGTCCAGGCTGTTTTTAATGCCGACCTTTACAAAAAAGA
CCCGGTGACGAAACCTATATATTCCAGTGGCTGCAAACAAACGTTTTTTT
AAGCTCTAACTCGTGTGAGTTTAAAATCTCAAATTGCTTTCTTGAACACC
ATCATTTCAGGAACTCCTTACTACATGTCACCGGAAAGGATCCACGAAAA
CGGATACAATTTCCGTTCCGATATTTGGTCCCTTGGATGTCTCTTGTTCG
AGATGGCTGCCCTGCAATCACCGTTTTATGGAGATAAGATGAATCTATAT
TCTTTATGCAAGAAAATTGAGCAGTGTGATTACCCACCGTTACCTTCAGA
ATATTACACAGACGACTTGCGTAGCCTGGTGGATTTATGCATCAACCCTG
ACCCGGAACAGAGGCCAGATATCGATTACATTCACCAAGTAGCTGAGAAG
ATGTACGCTTTCAAGTTAACAAAGGAACGATAA Coding sequence (CDS) from alignment at sc0000743_pilon:16056..17788- >XLOC_036152 ID=XLOC_036152|Name=XLOC_036152|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1974bp|location=Sequence derived from alignment at sc0000743_pilon:16056..17788- (Clytia hemisphaerica_ch_hm2_pilon)
CAGCAATCAGAACAAAAGAAAGATCTAAAAGAAGTCGAAGACAAACTCGG
GGACGTTCGATTGAAAACACCTGACGATAAAAACAACAACACCCCCGGTG
GTAACCAGGGCAACAAGAAAACCATGGAAACAGAAAATGGCGACGACAAC
AAGTACAACTGTCTCGGAAACTTCGAAATCCAAAAACGTATAGGAAAAGG
TCAATTTTCAGAAGTCTTTCGTGCACGCTGCTTGATCGATAACAGTATTG
TAGCGCTGAAGAAGGTGCAAATCTTTGAAATGATGGATCTAAAGGCGAGG
AATGATTGCATCAAAGAAATTGATTTGCTCAAATCCTTAAATCATCCCAA
CGTTATTAAATATTTGGCCTCATTTGTGGAAAACAACGAACTGAACATTG
TGTTAGAATTAGCCGATGCTGGCGATCTATCCAAAATGATTAAACACTTT
AAAAAACAGAAACGTTTGATCCCAGAGAAAACCATCTGGAAATATTTCGT
CCAGATCACAGCAGCTCTCCAGCACATGCACATCAAAAGAATCATGCATC
GAGATATTAAGCCTGCCAATGTCTTTATAACTGCTAGCGGTATTGTCAAG
TTGGGTGATTTGGGTCTTGGACGTTATTTCAGCTCACAAACGATAGCTGC
ACATTCTTTAGTCGCAGCAATCAGAACAAAAGAAAGATCTAAAAGAAGTC
GAAGACAAACTCGGGGACGTTCGATTGAAAACACCTGACGATAAAAACAA
CAACACCCCCGGTGGTAACCAGGGCAACAAGAAAACCATGGAAACAGAAA
ATGGCGACGACAACAAGTACAACTGTCTCGGAAACTTCGAAATCCAAAAA
CGTATAGGAAAAGGTCAATTTTCAGAAGTCTTTCGTGCACGCTGCTTGAT
CGATAACAGTATTGTAGCGCTGAAGAAGGTGCAAATCTTTGAAATGATGG
ATCTAAAGGCGAGGAATGATTGCATCAAAGAAATTGATTTGCTCAAATCC
TTAAATCATCCCAACGTTATTAAATATTTGGCCTCATTTGTGGAAAACAA
CGAACTGAACATTGTGTTAGAATTAGCCGATGCTGGCGATCTATCCAAAA
TGATTAAACACTTTAAAAAACAGAAACGTTTGATCCCAGAGAAAACCATC
TGGAAATATTTCGTCCAGATCACAGCAGCTCTCCAGCACATGCACATCAA
AAGAATCATGCATCGAGATATTAAGCCTGCCAATGTCTTTATAACTGCTA
GCGGTATTGTCAAGTTGGGTGATTTGGGTCTTGGACGTTATTTCAGCTCA
CAAACGATAGCTGCACATTCTTTAGTCGGAACTCCTTACTACATGTCACC
GGAAAGGATCCACGAAAACGGATACAATTTCCGTTCCGATATTTGGTCCC
TTGGATGTCTCTTGTTCGAGATGGCTGCCCTGCAATCACCGTTTTATGGA
GATAAGATGAATCTATATTCTTTATGCAAGAAAATTGAGCAGTGTGATTA
CCCACCGTTACCTTCAGAATATTACACAGACGACTTGCGTAGCCTGGTGG
ATTTATGCATCAACCCTGACCCGGAACAGAGGCCAGATATCGATTACATT
CACCAAGTAGCTGAGAAGATGTACGCTTTCAAGTTAACAAAGGAACGATA
AGAACTCCTTACTACATGTCACCGGAAAGGATCCACGAAAACGGATACAA
TTTCCGTTCCGATATTTGGTCCCTTGGATGTCTCTTGTTCGAGATGGCTG
CCCTGCAATCACCGTTTTATGGAGATAAGATGAATCTATATTCTTTATGC
AAGAAAATTGAGCAGTGTGATTACCCACCGTTACCTTCAGAATATTACAC
AGACGACTTGCGTAGCCTGGTGGATTTATGCATCAACCCTGACCCGGAAC
AGAGGCCAGATATCGATTACATTCACCAAGTAGCTGAGAAGATGTACGCT
TTCAAGTTAACAAAGGAACGATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000743_pilon | genome | sc0000743_pilon:16056..17788 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 676-996:322 |
| Aaloc | 10-672:1734 |
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