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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000102_pilon:576536..583570- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_036148 ID=XLOC_036148|Name=XLOC_036148|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7035bp|location=Sequence derived from alignment at sc0000102_pilon:576536..583570- (Clytia hemisphaerica_ch_hm2_pilon)
TCGACAAGCAACCCTGTAATGAACGGCCAACCACCACCGCCGCAAATGCC
GGATGATGAAAACACTGAGATGAGGAAACAAGAAATTGGTGATATTTTAC
ACCAAATCATGAATATCACGGACCAATCACTGGACGAAGCTCAAGCCAGG
TAAGAGGGGGACATTGAATTTATACATTAAGGGTTCTTGTTGTTACTTTT
TAGTTGGATTTTGCAAGGGTTGTAAATTTTTTTGGAATTATATTCAAGCT
TTGATATACCTACCGAAATAGAACTGGTTCCAGTATCATTCTCGCTTAGA
AATGAATTTCAGATGCCTCTCTTTAATTCGATCTTCAAGGCACTAAGAAA
TTTCTTTGAATAAGATAAAATTTAAATTATATGTAGAGTATTTTGACCTA
CTTCCCAGCTGAGGGGACCAATGTTTTAGTTCGAATTATAGAAGTTCGAA
TTAGAAAGAGTTGACTGTAACCATTTAAACAAAATTAAAGAAATGCTATC
GAAATCCAATTTGGCTGTAAAAGACCAAAGACGACCTTTATTACCAGTAC
TATTTTTTGTATTTTTGGTTTTGCAGGAAACAAGCTTTGAATTGCCACCG
CTTGAAGCCTGCATTGTTCACAGTGTTGTGTGAAATTAAAGAAAAGACAG
GTAAGATGTTAGCCTGGGCTCATTTATAATCCATGTAATACACCTTTTCG
ACCGTAGTCGTGTGGTCTGGCGCGTGCCACTTGATTATTTAATTATCCCA
CTAAACTCGATCCAATGCTTTTTAGGATAAAGCGGACAAAAAAATGCCCG
CGCGGCAATTGCCGGCTACGGTCGAAAAGGTGTATACAGTAGCATGGGTA
TTATATGATAACACGATGATTGTTTGTGTAAACTACAATTTGTCTATTCC
ATTATTTTATGCTTATTTTCTACCATGTCTGAATTAGTCTGAATTAGCAT
ACTTGACTAGCAAGAGGCTATTATAGTTTTTTTCCTCATGAGGGAATGGT
TCGGTTTCCGTTAAAGGACTTTGTTCAAAAGATCATATTATTGTGCTCAG
AAAAAATTATTTATAGAAGGGCAAGGTTTTCTCATGTTACTGGTTTAAAG
TGCCAATTCGAAAAATGATCAACAACTCTTGATATGATATTTGTGTAGAA
AGGTGCGAGCCGAATTTCGCATATTTTGTCTTAAATCACCAAATCTTCCA
AGTCTACCAATCACTAAATTAAGCCCACGCCTAAGTCAATCTATTTTTTA
GGGTAGCCTTTACAATCTTTGTCCGTTTCTCATTTAGTTTTAAACATGCG
CAGCCAAGTGGAAGATGAGCCACCAGATCCACAATTAATGCGATTGGATA
ACATGTTACTTGCCGAAGGCGTCGCAGGAAGTGATAAGAGCGGAAGTACG
GCCGCTGCGGCTGCAGCTGTTCACGATTCGCAAATCGAGAATGTGGATTA
CAAAATGAAGCTCTCGCAAATCCGACAAATTTACCACACCGAGCTCGAGA
AATATGAACAGGTACTTATAGGTTGAAGTCACTGATCTTTATTGGACCTA
CCTCCGGGTACCCCGGTGGAGGTTCTATAAATTAACCCATGTCCGTTCGT
CTGTTCTTTCGTCTGTTCGTCTGTCCGTCCGTCTGTTACCAGCTTTTCTC
AGGATTGGCTCATTAGTTTTTTCTGATTTTTTGCACAATGATGCAAAATC
GCAATGCCCAGAACGTGACGGAGCCCGATTTTTGAGAAAAAAATTATTTG
GGCAAATTTGGGCCAAAAACTGCCTAAAAATAGGGTTTTTTGGACTTTGT
GCAAAATCCTGTCATTACTTTTTTCTGATTTTTTTGTACAAAGATGGAGG
GCAAGATTCTCTAAAGAATGGCTGAAGTGGTTTTTCCTGGAAAATTCTTG
TTCGCCTTAAAAGATGGATTTTCGTATTTGGGGAAATTCCCTTTAACCAA
ATAAGAAAATATAGCTTTTCTCAATGTTGACTCGTTATTTTTTTCTGATT
TTTTGCACAATGATGCAAAATGGCAATGCCCAAAATGTGAAGGAGCCAGA
TTTTTAAGGAAAATCCTTTTGGGCAAATTTGGGCCAAAAACAGCTTAAAA
GGTTTTTTGGGCCTGAATGGTTTAAGTGATTTTCGTATTTGGGGAAATTC
CTTTTTACCATTTTACATTATTCAACACACAAGCTTTATTTTTCCATTCT
GAATTTTGGTACAATTATTGTCATTTTTTTCTTATTTTCATCTGATGTTA
ATCATTAGGTAGGTCCATTCAGCATGTTGCTTGTTAACCCTGAACTAAGC
TTTTTCCAACATCTATGATCTGAGTTCTTAGAAATGGTGCCTACTAGTTG
CAATACTCAATTTGGGTCAGTTTAGATTTAAAGAAATTTTCCGTTTTGTT
TTCACTCGCACTTTCGAAAAACTCCAGTAAAAGATTTTGTTTGCTGGGAT
CGAGAAACTGTGTCAAGAGTATATAGAAGTCAGTGGTTGAGGTCGATTCT
CATCCATAAACATCAACTATGTGGATACAGGCAGCGTTTTTCTTTTTGAA
AAATTCAGGAACTCTGTCTAGTCGTCCATATTCGCACTCACGTTTAATGA
TTTCCGACTATGTAAATAATGTGTCTAAGCTTGTCTATCAACGACCCCCG
TTTCCTTTTGATATTGGTCATTCGTGCAAAAGAAGTAATACATGTACTTA
TTTATTTGAGCATAATTCAAAACGTTCCGAAACAATGTTCCTTTGAGATA
CCTTAATCATTCTTATATTGCTCGGGAAATTCTTTCTTACAATCCAGTCA
TAAATATGAAGCCTGATAAAAGAACTGCCTTGTCAAGAATTCGGTATACA
GCCCGTGGAACTCATGAAACTTTTATAATATTATCACTTAGGCTTGTTCC
GAATTCACTACTCACGTGATGAACTTGTTACGTGAGCAGTCACGTACGCG
ACCCGTCTCCAAGAACGAGATCGAACGTATGGTGAACGTCATCCATTGGA
AGTTCAACTCCATTCAAATGCAACTGAAGCAAAGCACCTGTGAGGCTGTC
ATGATTTTGAGATCTAGGTTCCTTGATGCAAGGTGAGAATGATTTTATAC
CGAAATCCCACGGTCATTACCAGAGCACGGTGGTCCTGATTACCCATAAT
TCTTTTCGACCCTTGAAATGGCCTATAATATGCATCTTTATAAAATTATA
TTCATGACAATTATAGCAAAAAGTATCTATTCGCAGACACGTATTCCGTC
CTTCCCAGGACTCATCAGTGCGGCTCGGGTAAGCGAGCATAGACTGCTGT
TGTCACCAGAGTGCTCAATACACTAAGTGTTGAGCTTCGCATAATCGCTT
GTGGTGAACGGAGAAGCAGATCTTGCTCCTCAACAGAGTCTATAGAGTGC
TCAAATAACCGAAATTCTGAGCGTAATACATAACAAAAAGTATCAATACA
TAGGTAATAGTTATCGGACAGTTGCGAGTACAATATGAGAAATATTTTAC
GAGTTCCGAGATCTTTCCGTAGGCGAGGAAAATATACGGAAAATCCGGAA
CGAGTGAAATATTTCCATATTGTACGAGCAAACGTCTGATAACTAGTTTA
TCGGTGACCCAAAAAATGCACTTTTTGTGTTGGAGGACACTTTTGTAGCA
AAGTGACGTTAGATTGCTTCTACCGCTACAATGCAACAACATCTTTTCGT
CAATTTATATTTTTACATGTAAAATACAAGACATATTGTACTCTTTTTAA
CCAATCAGATTGCAGATATTTTTTGGATCGCCGATAGCAAAAAGTATAAA
TTAGATCTGTTAAAATATTAAATGTTTGTTCTCTCTACCAGACGGAAAAG
ACGTAACTTCAGCAAGCAGTCGACAGAGATTTTGAACGAATATTTTTATT
CGCATTTGAGCAACCCTTATCCGAGTGAAGAAGCCAAAGAGGAGTTGGCT
CGAAAGTGTGGTATCAGTGTTTCACAAGTAAGGAGCTACACGTTAAAAGT
TTTATTTTTACACAGTTCCCTGTTTCATATCAGACACATTTTTAGGTCTG
CCTTTTGTTATACGGTATTATGCTGATATAAGCATAAAAATATTTTTCTT
TTCCTCTTTCCGACCAATCTTGCTCCACATCCATGTCAATCCAATGTGAA
AAAGCTAAGATTACAAACGATATCACTCTTAGTCTTATTTAAAAACAAAA
CCTTTTAAAGGCAATGTACTACTATTACTATTGGTCATTGGTTGCTGCAC
AAGCGACGAGGTTTGGTTCAAGTGAACGAACCTTAGCCTGGGTCAGCCCA
TTCCATATGAGGGGAATTAAGTAGTCGCTCTAAGGTGTGAAGGGAATCAG
GTAGTCGGTCTCCGCTGCTAACGAGGTGCTCATTGAAAGCGACTATAGTT
GCGAAAATAGGCCTTGGAGCATCCTGCAACTCAACCAAATAAAAACAAAT
GGAAATAGTCATTCTTCCTTTTGTAAGCAACCGTAAGGCTCAAGCTCTGA
AATCAGCCTAAAAAATTCGTCCTGTAATGTTCTCAAGGTCAAGATAAAAA
TATTATTATGGGAGGTCCTACAAAGTTTTAAACTCCAGCCCTGAGTCTAA
AATCTGTGTTGCTTAGATAATGTTTCGATACCTGAACCTGTTTCCATACA
AATCAAGACCACAGAGTTTTGTAATTAACTCTTCTACAAGAGAAAAAAAA
AAGTATGCGCCTCTAGTTCCAATTCCCATCCCGTCATTAGGTTTCAAATT
GGCTTGGGGAACAAGCGAACTTCATAGATGATAGTCTAGCTAGCCAGCTG
GCCGTGGACCCCGTGGAAATAATCGAAGCCCTGTATTACTAGGCTATTCA
CGTAAAATAACGACTCTATCGATCTAGCCATATTGAACAATTTTCACACT
AACTCAAAAAAATTCCCTTCCAATCATTAGGTTTCGAATTGGTTTGGAAA
CAAGAGAAGTTCATTGAAAAGCTGAGCTAGTCATGCTATGGGACCCGTAG
AAAAAATCGAAAGACAGTCTTAAAATCCTAGATTACTGGGTTATTAACGT
AAAATATCAACTCTGAAAGTTTCTTTCCCATCATTAGGTTTCGAATTGGT
TTGGAAACAAGCGAATTCGGTACAAGAAGAACATAGGGAAAGCGCAAGAG
GAGGCCAATATGTATGCAGCCAAAGCACAACAGAATCAACATCAATCTAC
AGCTGGTGGAGGTGCCGGTGAAGGTGGAAGCTCGACAAGCACTATTGCTT
CCAATCATATTGCTGAACAAGTTTCCCCCAGAGGTACAGAATTTACTTAA
AAGACGTCTTAGTAATTATTTTAAAACCTATCCTTTGTCGCTATAGTTTT
TTAGCACTTAGACCATGTTCGTACGTAACGGTCCAGTTTCGCTCCCAAAC
GAAATGAAGCCATTCTATTGGTTAGAATTGACGTAAATCTTGAATTTAAC
CAATAGAATGGCTTCATTTCACCGTAGTGTTTGAACATGGTCTTATTTGC
TCCGTTATTCAAAAACTCTTTTTAATGACCCAATGGAAAGTCACACCCAC
CGTAAGAGCCTGACTGGATGTTGCACACGGCCCAAAACCAAAAAAATCTA
TAATAAAAGTAATACGCTGAGAATGTTTTTCTTTATCCATTATTTTTACT
GAAACTCTCATTTCTTGTTTCGTTCATTTTTTAGAAGACCATCACCATGC
GCATGCGCACCATCATTCACCGACAGAACATCATCACCATAGTGACATGA
CGTCCCCTTATTCGACAGCACAGTCGTCTCATCACTCGCAGCAATCCCAA
TTGTCAAATGGACCTGATTGCGCTGTATGTTTTTAATTGTATTCTTTTTG
TTGTATCTTCATTTTTTTGCTACTGTAGTTCCGTAAGTAAGTAAGTAAGT
TTGCGACCGCAGTCGAGGGCGACCCGAAGGATGGGGAGTGCGCCACTCCT
AGTTCTGTATTTGAATCGTTCAAGCAGTTAAATGCTTTAGATACTAACCA
AAGTTGTCACTTCACTTTCATTGACCGCTCTACCTTTCCAAATCATCCTA
GATAACTCTGAAATATGGTTGCCAAATTTTCACATTTTTTGTAAATTTTA
ATCAATAATATGGTTGTGTGAAACCTGTTGAGTGGATTTGTTGTTGTTTA
GGGGTCTTAATTGTCGTTAATCTATACATTTTGACTGTCTTCACTTTTCT
TTCTAGGTGAGTAACTTGCATCACGTGGTATCGCAGGCCACCAGTGGATA
TAATACAAGCATCCAAAGTGCAGATTCTATGTCCATGGCTAACGGTGGTG
AAGGAGCTTCAGCTACCACTGAACCATCTGTAAGTTTTGTACAATGTGTT
GTCATGCTTTTCTATTCACCATCTTCAAGACGTTATGTTTTATACAGAAG
CACCATAAATAACCCCGGGCGTTTGCCACTGGTTTTATTGTTCGAAAATC
AAAACTAGTAGCAAACTCCCGGTCTTTTGGGGGTGTTTCTTTATCAAACA
TTAACAATATCCCGAATTTCGATATTAACTAAGGAAATTTAGTTGATTGA
TTGTTTTTCCTAAATTCTTGTCTTTCTGACAGTGTAGTAATGGTTTCTGA
TTGAACTTAGTCCGAAATTTTTTCGGCTTCTTGAAGAAGTAGACTTTGAA
ACCATGGTATAATTGCTTTTGATTGTTGATTTAACACTTTCTGAGCCATG
AATAGCTGTTTAAAATGTTCTTTCGTTAATTTGTGTAGGTCAGTAATTTC
AACACATTGTTGGACTCCATCAATAACAGCCCCTGGGGAAAGGTATGTTT
TTATTTTGTTGTTCCTTATTTCTTTGTCAGACTTCCATTTTTCCTGTTCC
CTCTGCAGAGAAGAATCGTACCTTCTCGAACGAAAAACCTTGTCTTTACC
AAGAAGTCGAGTTTTTGAAATTGTCAAAGTTTTTGGAACTTTTCCTTGCG
AAATAAATCAAGATGATTAACCTAGTATTTTTTCCTTCAGGTTGATTCCC
ATAACCACCATTCTAACACTGGAAGACATGGCTAA Coding sequence (CDS) from alignment at sc0000102_pilon:576536..583570- >XLOC_036148 ID=XLOC_036148|Name=XLOC_036148|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2664bp|location=Sequence derived from alignment at sc0000102_pilon:576536..583570- (Clytia hemisphaerica_ch_hm2_pilon)
TCGACAAGCAACCCTGTAATGAACGGCCAACCACCACCGCCGCAAATGCC
GGATGATGAAAACACTGAGATGAGGAAACAAGAAATTGGTGATATTTTAC
ACCAAATCATGAATATCACGGACCAATCACTGGACGAAGCTCAAGCCAGT
CGACAAGCAACCCTGTAATGAACGGCCAACCACCACCGCCGCAAATGCCG
GATGATGAAAACACTGAGATGAGGAAACAAGAAATTGGTGATATTTTACA
CCAAATCATGAATATCACGGACCAATCACTGGACGAAGCTCAAGCCAGGA
AACAAGCTTTGAATTGCCACCGCTTGAAGCCTGCATTGTTCACAGTGTTG
TGTGAAATTAAAGAAAAGACAGGAAACAAGCTTTGAATTGCCACCGCTTG
AAGCCTGCATTGTTCACAGTGTTGTGTGAAATTAAAGAAAAGACAGTTTT
AAACATGCGCAGCCAAGTGGAAGATGAGCCACCAGATCCACAATTAATGC
GATTGGATAACATGTTACTTGCCGAAGGCGTCGCAGGAAGTGATAAGAGC
GGAAGTACGGCCGCTGCGGCTGCAGCTGTTCACGATTCGCAAATCGAGAA
TGTGGATTACAAAATGAAGCTCTCGCAAATCCGACAAATTTACCACACCG
AGCTCGAGAAATATGAACAGTTTTAAACATGCGCAGCCAAGTGGAAGATG
AGCCACCAGATCCACAATTAATGCGATTGGATAACATGTTACTTGCCGAA
GGCGTCGCAGGAAGTGATAAGAGCGGAAGTACGGCCGCTGCGGCTGCAGC
TGTTCACGATTCGCAAATCGAGAATGTGGATTACAAAATGAAGCTCTCGC
AAATCCGACAAATTTACCACACCGAGCTCGAGAAATATGAACAGGCTTGT
TCCGAATTCACTACTCACGTGATGAACTTGTTACGTGAGCAGTCACGTAC
GCGACCCGTCTCCAAGAACGAGATCGAACGTATGGTGAACGTCATCCATT
GGAAGTTCAACTCCATTCAAATGCAACTGAAGCAAAGCACCTGTGAGGCT
GTCATGATTTTGAGATCTAGGTTCCTTGATGCAAGGCTTGTTCCGAATTC
ACTACTCACGTGATGAACTTGTTACGTGAGCAGTCACGTACGCGACCCGT
CTCCAAGAACGAGATCGAACGTATGGTGAACGTCATCCATTGGAAGTTCA
ACTCCATTCAAATGCAACTGAAGCAAAGCACCTGTGAGGCTGTCATGATT
TTGAGATCTAGGTTCCTTGATGCAAGACGGAAAAGACGTAACTTCAGCAA
GCAGTCGACAGAGATTTTGAACGAATATTTTTATTCGCATTTGAGCAACC
CTTATCCGAGTGAAGAAGCCAAAGAGGAGTTGGCTCGAAAGTGTGGTATC
AGTGTTTCACAAACGGAAAAGACGTAACTTCAGCAAGCAGTCGACAGAGA
TTTTGAACGAATATTTTTATTCGCATTTGAGCAACCCTTATCCGAGTGAA
GAAGCCAAAGAGGAGTTGGCTCGAAAGTGTGGTATCAGTGTTTCACAAGT
TTCGAATTGGTTTGGAAACAAGCGAATTCGGTACAAGAAGAACATAGGGA
AAGCGCAAGAGGAGGCCAATATGTATGCAGCCAAAGCACAACAGAATCAA
CATCAATCTACAGCTGGTGGAGGTGCCGGTGAAGGTGGAAGCTCGACAAG
CACTATTGCTTCCAATCATATTGCTGAACAAGTTTCCCCCAGAGGTTTCG
AATTGGTTTGGAAACAAGCGAATTCGGTACAAGAAGAACATAGGGAAAGC
GCAAGAGGAGGCCAATATGTATGCAGCCAAAGCACAACAGAATCAACATC
AATCTACAGCTGGTGGAGGTGCCGGTGAAGGTGGAAGCTCGACAAGCACT
ATTGCTTCCAATCATATTGCTGAACAAGTTTCCCCCAGAGAAGACCATCA
CCATGCGCATGCGCACCATCATTCACCGACAGAACATCATCACCATAGTG
ACATGACGTCCCCTTATTCGACAGCACAGTCGTCTCATCACTCGCAGCAA
TCCCAATTGTCAAATGGACCTGATTGCGCTAAGACCATCACCATGCGCAT
GCGCACCATCATTCACCGACAGAACATCATCACCATAGTGACATGACGTC
CCCTTATTCGACAGCACAGTCGTCTCATCACTCGCAGCAATCCCAATTGT
CAAATGGACCTGATTGCGCTGTGAGTAACTTGCATCACGTGGTATCGCAG
GCCACCAGTGGATATAATACAAGCATCCAAAGTGCAGATTCTATGTCCAT
GGCTAACGGTGGTGAAGGAGCTTCAGCTACCACTGAACCATCTGTGAGTA
ACTTGCATCACGTGGTATCGCAGGCCACCAGTGGATATAATACAAGCATC
CAAAGTGCAGATTCTATGTCCATGGCTAACGGTGGTGAAGGAGCTTCAGC
TACCACTGAACCATCTGTCAGTAATTTCAACACATTGTTGGACTCCATCA
ATAACAGCCCCTGGGGAAAGGTCAGTAATTTCAACACATTGTTGGACTCC
ATCAATAACAGCCCCTGGGGAAAGGTTGATTCCCATAACCACCATTCTAA
CACTGGAAGACATGGCTAAGTTGATTCCCATAACCACCATTCTAACACTG
GAAGACATGGCTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000102_pilon | genome | sc0000102_pilon:576536..583570 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1519-1563:46 |
| Aaloc | 1465-1518:298 |
| Aaloc | 1342-1464:830 |
| Aaloc | 1204-1341:1350 |
| Aaloc | 1006-1200:1949 |
| Aaloc | 871-1005:3194 |
| Aaloc | 679-867:4145 |
| Aaloc | 457-678:5747 |
| Aaloc | 382-453:6459 |
| Aaloc | 232-378:7036 |
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