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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000038_pilon:1772894..1777323- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_036129 ID=XLOC_036129|Name=XLOC_036129|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4430bp|location=Sequence derived from alignment at sc0000038_pilon:1772894..1777323- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAGAAGTTTTCAAATCGTTTTGTTCTTTTGGAGCCGGAAAAGATGG
AGCAGCTCTCATGGATAATTCCAAATTTGCAAAACTTGCACGAGATTTAA
AACTTTTGGATAAAAAGCTCACTGCAACAGATGTTGATATTATTTTCAAT
CGAACTGAAGTTAAACCGTATGTATTTACAGTCAGGCACATCCTGGCAAA
TGAACGGGGTATTTTTCACTTGCGACCATTGGCAAATGAACGGGGTCGAA
AACAAAAGTGACGTAATAGCGCCGAATACCCAGTTTAATTGAACCAGGTT
GGAAATATTTTGCTTCATTTCAAAGAACTGCATAGATGAAATTTTTTTTC
CATGGGTCAATTTTGTCTTTGAAGATTGAAGAAACTTTTAACGAAAAAAT
AAAGTTCCCAGTTTTCTTCCTTTTTTCCCTTTTTCAGTTTGAAGTTCATT
TTTATTCATTTTCACGCTTTTAGCCTGAGACGTCCTATCTCATTTACACT
GGGTGACAAATACCCCATGCAAATGCTCACCCTGTTCATTTGCCAGGATG
TGCCTGACTGATTTAGTATACTTTTTCTTACTCGATAATTTTTTTTCTGC
CAGTGTTCCAACAGAAACGTTTTTCCACAACATACACATTTTAACAAAAG
ACAGATTGAATTTTGGTTCTGTCATCATTTGTGGTTTTTACATCCAACTT
GTATTCTAACACAACTAATCCTTTATTTTGGAAAGTTACTTATCACTCTA
CTAACCTATTTTAGAAAAACTGAGCGCAAAATAAACTTCAAGCAATTCAA
AGCTGCTGTCAAATTATTGGCAGAGAAGAAATATCCTGGAGATGCTGACG
GTGCATCAAAACTTGAAGAACTGATTGCTGCAGGCAAACCAACTGCTAAA
GGAGCAACTGTGAGTAAACATCATCCTGTTTGTCTATCTATCTATCTATT
TAATTAAGTAGCATTAGGCGTGAGCCCATATTCGCCACATATAAAATCTA
AAGTTTAAAATAAATATTATTGTTATAATGTACGAGTTTTATTAAAATTA
AGGGGAAGAATATAAATACTAGAGCAAGAGTTAAACAAAGTTAACTAAGG
CTAAGACTAAGGCTATAGTACTTAATAAGAAAAGTGATATGAAAAATGAA
TTAATGTGCTAAGTAAAAAATTTTATTGATATACAAAATAAAATAAAATA
AAATAAAATAAAATAAAACTCCTTCCTAGTATTGAGTAAACCTCAGAAAT
AATGCAAGAGATTAGTAGATGCTAAGCAGGAATGAATGAATTAATGGCAC
AAAGATTGTTCTAGAAGAAGGTGCTAAGACTTGGCACAAAGATTGTTCTA
GGGTAAGGTGCTAAGACTTGAAAGTGGAAGTAAAGATTCATTGTAAGGCT
ATAGCTGTAAAAATATATAGTTAGGATAAATGAGATTTAAATATGTTTTA
GAAGTTCGTCAGAAAATGTTGTTAAGTTATCATTCATGGTCACTTCATTT
GGAAGTTCGTTCCACCAGTCAATGGTGGAAGGGATAAAAGAGTTGGAATA
TGCCAGGACTCTACCACGCACTTGTTGGAACTTGTTGCTTATTCTTGCTC
GTTTGGGCAAGAAGTCTTTTGGTAGGAAAATCTTTTCATTAACAATTTTG
TGAAGCATGAGCAAATTGTTTTTCTTACGACCGAATTCAAGGGATTCCCA
GCCAAGATCGTTGATCATAGTTGTGGGGCTGGATTTCCAGGACCAGTTGG
AGTAGACGAAACGCGCAGCTTTTCGTTGGACTTGCTCCAGTTGTTTAGTG
AGGCTTTCGTTGTTGACTGGATTCCAGACGGAGGATGCATAATTAAGAAT
GGGTTTCACGTAGATCTTGTATGCCTGGGATTTGATTGTTCTGTTGCAGC
CTCGGAGGTTTCTCTGTAGGAAGTTGATGATTTGGTTCGATTTTTTACAT
ATGTTAGCCACATGAATATTCCATTTTAGTTTTTTATGGATTTCGACTCC
AAGGTATTTTGCAGAGTCAACTTTATCGAGGGTTTCATTGTGAATACTGT
ATGATGTTTTCAAGGGTTTCGTTTTGTTTGTAATTGTCAAGACCTTGCAT
TTTTTGGGGTGAAATTCCATGTTGAAATCTTTTTCCCATGCTTGGAGACT
GTTAAGATCTTGCTGAAGGATGAGGGCATCGTAAATTGATTTGATAATTC
GATATAGGTAGGCGTCGTCTGCGAATAGTCGAAGCAAGGAGAGAACAGCT
GATGGCATGTCGTTAATATAGACTAGGAACAATAGAGGTCCTAAGACGGT
TCCTTGTGGGACTCCTGAGGTAACATTTGATTTCTCTGAAGATTTGCCAT
TCAAGATTACTTGTTGAGTTCGTCCTGATAGAAATGATTGGATCCAATCG
AGGGATTTACCCTTGATACCGTAGTGGGCGAGTTTGAGGCAAAGTTTTCG
ATGATCAACTTTGTCAAAAGCTTTGCTGAAATCTAGCAATATGGTGTCCA
TCTGATCCCCGTTGTTGAGAGCTTTGGCAAAATCATTGACAGCGATAAGC
AGTTGCGATTCGCATGACCTTTTCTCTCTAAAACCGTGTTGGACCTCAGT
GATGGCATTGTGTTTGTTAAGATGTTTAATGATGTTGCTATATATAATGT
GTTCTAATGTTTTACATGAAATGCTCGTTAGTGAGACTGGTCGGTAGTTC
TCTGGCGAGCAGCGGTCTTTGTTTCCACCTTTGTAGATTGGTGATACGTG
GGCATGAAGCCAGTCTTTTGGAAGTTCTCCTTTTTCGAGTGAAGTTGAGA
ATATGAGTTCTAAAGCAGGTGTAAGTTCCTCAGCAAACTCTTTCATGAAT
CGTGAAGAAATGTTGTCTGGACCAGGGGCTTTATTTGGTTGAAGTTTATT
TAGAAGGGATTTGATGCCATTAGAAGAAATCGTTATGTCGCGCATTGTAT
CTTTGATCTCTGGTGTTTCAATTTTTGGGTTGTTATTGTCGGGTACTGAG
AATACACTACAGTATTGCTGATTGAGGACATTAGCTTTTCCTGAATCGTC
AATAATAAAGACCCCCTTGTTGTCCTTTAGTGCTGATATTGAAATGCTGT
CTTGACGTTTGCTTTTTATGTATGAGTAAAACTTTTTAGGGTTAGAATCA
TCATCAAATACTTTTTCTTGTAAGAATTTGTCATGAGCAGCCTTGCATTC
TTTCTTGTAGTCTTTAAAGGCTGTTTTGTATTTGTCCCAATCAGTGCACA
TTCGAGTTCGTTTGGCTCTCCTGTAAAGTCTCTTTGTTCTTTTTAGTAAA
CGGTTGCAAGTCCTGTTGAACCAAGGTTGGTTGAAACGTGGTGAGCTTAG
TTTTGATGGGATATCATTCATAGTTGATTCTACGATACCTTTGAAGTCTG
ACCATTGGTTTTCAACTGTGTCGTTTTTGAAGTTTTCACAGAAGAAGTTT
ACTTTTGTAACAAGTGTTTCTTTTAGATGTTGAATGTTGGCTCTCCCCCA
TAAGTAGATGGTTCTAGGTGTTGGTTTAATACGACGGGGGTGACACAGTA
TGTCAATTGATGGGATGCTTGTGTGGTCGCTGATCCCTGGAAGGTCTTCA
ATGCAGGTTACCAAAGACGGATTGTTTGTTAGGATAAGGTCAAGACAATT
TTCATTTCGTGTAGGGAAGTTGACGAGTTGTTCAAGGTTGAGGTTGTTCA
TTAATTCAAGGAAAGTTTCATTGATAATTTTAGCATTTTGGTAGGTAGTT
ATCAAATTCATGTCCCAGTCGATATCTGGTAGGTTAAAATCTCCACCAAA
CCAGAGAGAGTTTTTCTTGTACTTGGACGAGATAGTTTTGAAGTCTTCTC
CCATTTGTTGTAGGTACGATAGTTTAGTTTCGGGTGGTCGATAGGCTGCA
CATAGTATTATAGGCTTTCGGAAGGTTTCAACTTTTACTGCGATGAGTTC
TGTTGTTTTAGATTTATACACCTCTTCACAAATAAGATTGTTTTTATATA
TAATCATGACACCACCCCATCCGTCATCACGGTCATTTCGAAAGGATTCA
TAGCCTTTTGGAAGAAATTCGTTGTCTTTAAGGGCTGGATCTAGATGTGT
TTCAGTACAGAGAACTATATCAGTTTTTGAATCAAAAAGCACCTGTACTG
AGGCTTTATAAATATCAAATTCTATATACTGTCCTAGCCTTGAGAATCAC
ACACAAAAATAGTATTATCTCATCGTATCTTTAATTTTCAGAAAGCAGCA
AAAGGTGGAGCTGTTGATAGACTAACAGATACAAGCAAATACACAGGAAG
TCACAAAGAACGTTTCGATGAATCAGGAAAGGGCAAAGGCCTTGATGGGC
GTAGAGAAATGGATAAGAAAGCATCAGAGGGATATGTTGGTGGTTATCAA
GGAATGGATACCTATGATAAATCTCACTGA Coding sequence (CDS) from alignment at sc0000038_pilon:1772894..1777323- >XLOC_036129 ID=XLOC_036129|Name=XLOC_036129|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1002bp|location=Sequence derived from alignment at sc0000038_pilon:1772894..1777323- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAGAAGTTTTCAAATCGTTTTGTTCTTTTGGAGCCGGAAAAGATGG
AGCAGCTCTCATGGATAATTCCAAATTTGCAAAACTTGCACGAGATTTAA
AACTTTTGGATAAAAAGCTCACTGCAACAGATGTTGATATTATTTTCAAT
CGAACTGAAGTTAAACCATGGAAGAAGTTTTCAAATCGTTTTGTTCTTTT
GGAGCCGGAAAAGATGGAGCAGCTCTCATGGATAATTCCAAATTTGCAAA
ACTTGCACGAGATTTAAAACTTTTGGATAAAAAGCTCACTGCAACAGATG
TTGATATTATTTTCAATCGAACTGAAGTTAAACCAAAAACTGAGCGCAAA
ATAAACTTCAAGCAATTCAAAGCTGCTGTCAAATTATTGGCAGAGAAGAA
ATATCCTGGAGATGCTGACGGTGCATCAAAACTTGAAGAACTGATTGCTG
CAGGCAAACCAACTGCTAAAGGAGCAACTAAAAACTGAGCGCAAAATAAA
CTTCAAGCAATTCAAAGCTGCTGTCAAATTATTGGCAGAGAAGAAATATC
CTGGAGATGCTGACGGTGCATCAAAACTTGAAGAACTGATTGCTGCAGGC
AAACCAACTGCTAAAGGAGCAACTAAAGCAGCAAAAGGTGGAGCTGTTGA
TAGACTAACAGATACAAGCAAATACACAGGAAGTCACAAAGAACGTTTCG
ATGAATCAGGAAAGGGCAAAGGCCTTGATGGGCGTAGAGAAATGGATAAG
AAAGCATCAGAGGGATATGTTGGTGGTTATCAAGGAATGGATACCTATGA
TAAATCTCACTGAAAAGCAGCAAAAGGTGGAGCTGTTGATAGACTAACAG
ATACAAGCAAATACACAGGAAGTCACAAAGAACGTTTCGATGAATCAGGA
AAGGGCAAAGGCCTTGATGGGCGTAGAGAAATGGATAAGAAAGCATCAGA
GGGATATGTTGGTGGTTATCAAGGAATGGATACCTATGATAAATCTCACT
GA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000038_pilon | genome | sc0000038_pilon:1772894..1777323 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 313-501:190 |
| Aaloc | 169-312:3666 |
| Aaloc | 1-165:4431 |
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