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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000038_pilon:1787089..1790961- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_036128 ID=XLOC_036128|Name=XLOC_036128|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3873bp|location=Sequence derived from alignment at sc0000038_pilon:1787089..1790961- (Clytia hemisphaerica_ch_hm2_pilon)
CAGCAATACAAAAGGTTAGCACGACAATATCATCCAGACAAAGCTGGGGC
TGAGTTTGAAGATAAGGTATGGCTAATGTTTACTTTAGGAGCTAAGATTT
TTCTACCATTCTAATAATTTTAAAGAATATGTTGCTTTGTATTCGGTCAT
GTAAGTGCAGTTTAAAGACCAATTATTTTTTAAACTCTACTCAGTGCAGC
TCAGTGACCCATTTTTAAATGATATTCCTTCAAATTTCCATTTCAGTTCA
AAGAAATTTCAGTTGCCCATGAAGTTTTGACCGATCAGAAAAAACGTGAC
TTGTATGACAGATATGGAGAGAAGGGCCTTCAAGAAGGTGGAGGTATGGG
AGCAGGTGAGAAAGATGATTTTTCTTTCCATAGCTTGAAGTAACAATGTT
CCTGAACTCTGCTTAAAATTTAGAATGTTCAATAACAATTTGTTACTCAT
ATGACTGAAGTTGTGTCAAGATATTTCATGTCTATTTGGTTGATTACTAA
ACTGTGCTAAATTAAATGCAATTGATTCCCCAATATTATATTGCTCGCTC
TATATAATGATGACTTAATATTGATAAACATTGTCGTACATTAATCCTTC
CATTTCACTTTTTATTCAGGAATGGAAGATATCTTGAACCACATATTTGG
AGGCGGTGGTGGCGGCGGCGGCGGAATGGGTGGAATGGGCGGAATGGGCG
GCTTTGATAGCATGTTTGGTAAGAAGGAATTAATGTTTTGTCAGTTTCTC
TGAAGTTGTATTTTTAGTGACGACATTGAAATATTTTCCAAATTTTATTG
CTCATAGACATTTTATTTATGACTTAATTTATTAGGTTTCAGTCCATTTG
GAGGTATGGGCGGTATGGGTGGAGGCCGAAGGAGACATCAACGAAGACGT
GGTGAAGACACAGTGCATCCATTAAGAGTGAAACTAGAGGATCTTTACAT
GGGGAAAGTTTCCAAATTGAAGCTTCGAAAGAAAATCATCTGCGCATCAT
GTGATGGGTAAGTAGCTATTATCGTTTCTGCTCTTGCTACTGCTATTATT
GTCATCTCTTTGTTTTCTATGTCTCTATGTTGGTTTTTATGCATGGTGTT
TGATATTAAAATTCAGTATGAAATCATAAGTTTACCTTTGATTACCTTAA
CATTAGAACTGGAGGTAAAGGAAATGCAGTTCAAACGTGTTATTCGTGTC
ATGGAAATGGCGTCAAAATCAGTATACAATCCATTGGTCCTGGTATGGTT
CAACAAGTCCAACGTGTGTGTCCAGACTGTCAAGGAGATGGTATGCTGAT
TTCATTTTCTTCTAATTCCATTTCAATATTCAAATCAATCATCTCAAATA
GCTGCTCCTAAGGTTTTTTTACAGACACCTATGATGCATCTAACAACTTC
TGATACCCTTATTAGAGTAAAAAATTAGTCTGGTTGTGAATTTTCTGTTT
TTTTTCTGTTTGTTTTTTTAGTGTTATATCGCCCACAAAATTTCTTCCGT
TATCCGTCTCAGCAAAGTATATAACAAGGCTTTTCCGTTCCAAAATTGTG
CATAAATCACCAAAATTCATAGAATATGTGCTAATTTGCTGTGTGGAATC
CATATACCAGCTCTTTCGAAAAAAATCTACTTTGACCACTGATTTAAATG
TTTCTTACTTCTTGGTTTATTGAAGTACTCGTCAATTTAACTAAATTCTC
TTTGTTTCCAGGCGAAGTAATTGACCCTAAAAACAGATGTAAGAAATGTC
TCGGAAAGAAAGTCAGTGAAGAAACTAAAATACTGGAGGTACTTACGACT
TAATCACAAAAGAATAAGTGAATAAGAGTATGGAAATAATAAACTTTGTC
AAATCCCTAACAGTGGGTTGTAGCTAAAAACCATGCAATTGAACCATATA
TCGAAGATTGATATTGAACACATTCTCATATATTTCTCACATTTTTCTTG
GCGAGCTATTCTCCTATCGAGGGGACAAGAAATTTGTAAGACTATTTACA
TTTTTCCCTAATGTAGGTTCGCGTCAACAAAGGAATGATGGACGGTCAAA
AAATCACTTTCAGAGGAGAAGGAGATCAACAGGTTTGATACATCCTTCCT
TTCCATTTCCAAGTTTAATCAAACCTTTTTGTTGACGTTGTAGCCCTGAA
AACTGACCAAACCAAGGGTTTCAGTTAATTTTTGAAAATATTAGCATATA
GCAAGACTGAGGTTAGGTGCTACTCATTTGGAGGCAATCTGAGTCAGCTA
GATAAGATGGATTTCCTCACCACATCGTATTGTACCCAGTTTTAGAGAAT
CAATTGTCAATATTAGATTGCGTGACATCATCTAACCTAAGCCTTTCATA
CAAAGAGCCCTTTTGGGTGGTTAACTCTACGAAAAAATGATGTCTCTGAT
GACTCTGATCAAACGAGGTTACTTAGAAATAATATATTTAACTTTGAATT
TTATTTGGCAGCCTGGCGTTGAAACTGGTGACGTGGTGATTGTCGTCCAA
CAACTTCCTCACGAACAATACACACGTAAAGGTGACAACCTCATGATGAA
ACTCAACATTGGACTAACGGAAGCGCTCTGCGGCTTCAAAATCCCCATCA
AACATTTAGACGGACGTGAATTGATCATCTCACACCCGCAAGGGAAAATC
ATCGAACCAGGTGAGAGCTTTGACTGTCAGAAAAAGAGAATCTGCTGAGA
AACACTGACCTCATATTCTTCTTTTTCTTACCAAGGTTCTGGACGAAGGT
AACTTTAATACTCCATTTTAAATTTAGTATGGTTGTTTCAGGTTGTTTAA
ATACTCTTTTGTAGAAGTGGATTTTTACTTTAAATTCAAATACATCCGAA
TTTAGAATAAACGTTTGTGATAATTAAAATACGGAATGCTGATCCTATTG
ATTCTTCCTTTAAAAATTTCGAAAAGCAAATAGCAAACAGCAAACATTAT
CATATTATATCTTATTCGGTTTCTTATCTGATTCTTTTTTCCTCAGGAAG
CACAAAATTCATCATGAACGAAGGAATGCCAAGACACCGAGATCCATCAG
ATCGTGGCAACCTCTTCATCGACTTTGACGTGGTTTTCCCTGAAAAAGAT
TTCCTTGCTCACGAAAAACTACCAGTAAGATGGTTTGTATGTGTTTTCAG
AATAGAAATAGGCAGGAAATGCTGATTTGAAAAAGATCAGAGACTCCTTG
CTAGAATCAGTTGGTTACTTTATGTTTTAAATTCCTTTTGAATTCAATTT
ATTCAACGATCAATAATAGCAGAACTAACAGCCATTAGAACAACCAGTAG
TTACCATTATCATTTTTAAAAGCGTTCGACATATTGATTGTGGTGTCAAA
GACTGAATGGTTGTTGTGGTTTTTGTATTGTACGTAATATAAGTACTAAA
TGAATTTTCTTTTGAAGGAGTTGATCAAACTGTTGCCGCCACGCCAAGAG
ATAATGGATATCCCTGATGGTGAGAATGGTGAAGAAATTGAAGAATGTCA
CCTCGTCGAACTGGACCAAAGTGAAGCAGGTACGTCTTCTACTCTAGTCT
TTTATTTGATTAAGAACTTCAATTGAAAAATAGCTTGCTTTTTAGTTTAA
ATAGGAATTTAGCAGTCATCTTCATTTTAGCTTTCGCTGTAGAAACAGAA
AAGCTTTCATAAAGATTTCATACTTATATAGGTACTTTACCTGAATGATA
TCGAGTACTCACTTCTCTTTGATTCGGTTGAGGAGTTAATTCAACGTAAT
TTATCTGTATGTTTTCCATCAGGTCCTGGTGCATCACATGCTACGTACGC
TGATGACTCTGATGACGAAGAAGGCCATCGGGGTCATCCCGGTGGCCCTG
GTGTGCAATGCGCTACACAGTAA Coding sequence (CDS) from alignment at sc0000038_pilon:1787089..1790961- >XLOC_036128 ID=XLOC_036128|Name=XLOC_036128|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2526bp|location=Sequence derived from alignment at sc0000038_pilon:1787089..1790961- (Clytia hemisphaerica_ch_hm2_pilon)
CAGCAATACAAAAGGTTAGCACGACAATATCATCCAGACAAAGCTGGGGC
TGAGTTTGAAGATAAGCAGCAATACAAAAGGTTAGCACGACAATATCATC
CAGACAAAGCTGGGGCTGAGTTTGAAGATAAGTTCAAAGAAATTTCAGTT
GCCCATGAAGTTTTGACCGATCAGAAAAAACGTGACTTGTATGACAGATA
TGGAGAGAAGGGCCTTCAAGAAGGTGGAGGTATGGGAGCAGTTCAAAGAA
ATTTCAGTTGCCCATGAAGTTTTGACCGATCAGAAAAAACGTGACTTGTA
TGACAGATATGGAGAGAAGGGCCTTCAAGAAGGTGGAGGTATGGGAGCAG
GAATGGAAGATATCTTGAACCACATATTTGGAGGCGGTGGTGGCGGCGGC
GGCGGAATGGGTGGAATGGGCGGAATGGGCGGCTTTGATAGCATGTTTGG
AATGGAAGATATCTTGAACCACATATTTGGAGGCGGTGGTGGCGGCGGCG
GCGGAATGGGTGGAATGGGCGGAATGGGCGGCTTTGATAGCATGTTTGGT
TTCAGTCCATTTGGAGGTATGGGCGGTATGGGTGGAGGCCGAAGGAGACA
TCAACGAAGACGTGGTGAAGACACAGTGCATCCATTAAGAGTGAAACTAG
AGGATCTTTACATGGGGAAAGTTTCCAAATTGAAGCTTCGAAAGAAAATC
ATCTGCGCATCATGTGATGGGTTTCAGTCCATTTGGAGGTATGGGCGGTA
TGGGTGGAGGCCGAAGGAGACATCAACGAAGACGTGGTGAAGACACAGTG
CATCCATTAAGAGTGAAACTAGAGGATCTTTACATGGGGAAAGTTTCCAA
ATTGAAGCTTCGAAAGAAAATCATCTGCGCATCATGTGATGGAACTGGAG
GTAAAGGAAATGCAGTTCAAACGTGTTATTCGTGTCATGGAAATGGCGTC
AAAATCAGTATACAATCCATTGGTCCTGGTATGGTTCAACAAGTCCAACG
TGTGTGTCCAGACTGTCAAGGAGATGAACTGGAGGTAAAGGAAATGCAGT
TCAAACGTGTTATTCGTGTCATGGAAATGGCGTCAAAATCAGTATACAAT
CCATTGGTCCTGGTATGGTTCAACAAGTCCAACGTGTGTGTCCAGACTGT
CAAGGAGATGGCGAAGTAATTGACCCTAAAAACAGATGTAAGAAATGTCT
CGGAAAGAAAGTCAGTGAAGAAACTAAAATACTGGAGGCGAAGTAATTGA
CCCTAAAAACAGATGTAAGAAATGTCTCGGAAAGAAAGTCAGTGAAGAAA
CTAAAATACTGGAGGTTCGCGTCAACAAAGGAATGATGGACGGTCAAAAA
ATCACTTTCAGAGGAGAAGGAGATCAACAGGTTCGCGTCAACAAAGGAAT
GATGGACGGTCAAAAAATCACTTTCAGAGGAGAAGGAGATCAACAGCCTG
GCGTTGAAACTGGTGACGTGGTGATTGTCGTCCAACAACTTCCTCACGAA
CAATACACACGTAAAGGTGACAACCTCATGATGAAACTCAACATTGGACT
AACGGAAGCGCTCTGCGGCTTCAAAATCCCCATCAAACATTTAGACGGAC
GTGAATTGATCATCTCACACCCGCAAGGGAAAATCATCGAACCAGCCTGG
CGTTGAAACTGGTGACGTGGTGATTGTCGTCCAACAACTTCCTCACGAAC
AATACACACGTAAAGGTGACAACCTCATGATGAAACTCAACATTGGACTA
ACGGAAGCGCTCTGCGGCTTCAAAATCCCCATCAAACATTTAGACGGACG
TGAATTGATCATCTCACACCCGCAAGGGAAAATCATCGAACCAGGAAGCA
CAAAATTCATCATGAACGAAGGAATGCCAAGACACCGAGATCCATCAGAT
CGTGGCAACCTCTTCATCGACTTTGACGTGGTTTTCCCTGAAAAAGATTT
CCTTGCTCACGAAAAACTACCAGAAGCACAAAATTCATCATGAACGAAGG
AATGCCAAGACACCGAGATCCATCAGATCGTGGCAACCTCTTCATCGACT
TTGACGTGGTTTTCCCTGAAAAAGATTTCCTTGCTCACGAAAAACTACCA
GAGTTGATCAAACTGTTGCCGCCACGCCAAGAGATAATGGATATCCCTGA
TGGTGAGAATGGTGAAGAAATTGAAGAATGTCACCTCGTCGAACTGGACC
AAAGTGAAGCAGGAGTTGATCAAACTGTTGCCGCCACGCCAAGAGATAAT
GGATATCCCTGATGGTGAGAATGGTGAAGAAATTGAAGAATGTCACCTCG
TCGAACTGGACCAAAGTGAAGCAGGTCCTGGTGCATCACATGCTACGTAC
GCTGATGACTCTGATGACGAAGAAGGCCATCGGGGTCATCCCGGTGGCCC
TGGTGTGCAATGCGCTACACAGTAAGTCCTGGTGCATCACATGCTACGTA
CGCTGATGACTCTGATGACGAAGAAGGCCATCGGGGTCATCCCGGTGGCC
CTGGTGTGCAATGCGCTACACAGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000038_pilon | genome | sc0000038_pilon:1787089..1790961 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1234-1332:100 |
| Aaloc | 1120-1230:457 |
| Aaloc | 994-1119:876 |
| Aaloc | 793-990:1413 |
| Aaloc | 727-792:1858 |
| Aaloc | 652-726:2161 |
| Aaloc | 517-648:2717 |
| Aaloc | 346-513:3037 |
| Aaloc | 247-342:3253 |
| Aaloc | 136-243:3628 |
| Aaloc | 70-135:3874 |
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