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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000102_pilon:349896..356640+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_036124 ID=XLOC_036124|Name=XLOC_036124|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6745bp|location=Sequence derived from alignment at sc0000102_pilon:349896..356640+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCCGGAGATGGAAATGAATACAAAGATTCTTTTATGAAGATGGCCAG
CTCAGCCTTTACTGCAAGCAAGACTGGTTGGACAAGAGCAAGACAggtat
aaaaattttttttttgtttttttttgcttggtggTTGTTGGGATCCATAT
GTTACTACTCTACTTTACCTGAATTTCATAGAAAATATATAGGAGAAGAA
catgttgaaatttattagcttttttaagatttgatattttgcttttcCAC
TAAACAAAAAGCGGTTGATTTCCATCCATTTTTCCCTTcccttatttatt
tattattccaTTCTCTCATATCCTCCAAAAATGTCTCacagttttttatg
aaaacaatGATTAATTGTAGATGACTGATGGACAGATAATTTCCTCTTCA
GTCCTTAAAACATAACACTATTTAGAGAGTTTATCCAACAAAGAAGGTTG
GTGATTTAGACATAATAGCTAGATATCCAAAGTTTTAAGCAGTACAacaa
tctttttgaaaacaaagtcaAAGGAAAGGAAGGCTACATTAGAGTGAGAT
GGCAAAAGCAATGCTaaaagctggaaaaactggCCTAACAAGGGCTAAGC
AGGTAGGTATTTCATTCTGAATGCACATTTTTGTATaagccagacccgat
caatcgaacttgtcgaaccaatcgaacaatcgaactaatcgaactccatc
gaacgattaaagttcgattaaataaattaatcgaactctaagatttttta
aaagattgtgagtgttcgattaaaaGAAGTTCGATCAATGATGGGTTTGG
GTTCGATCAGTTTTGtttgacaagtttgtgctgctccgccaccgtatatt
agcttctttttgAAGCCAAATTCGTAATGTGAATcaggaaattacttccg
ataacggattacacacttttcctgtatccttttagcgccagaagaagcgg
tttgttggggcgggCGTAGTATTTCACCACTCGGCCCcgcgcgaaatcgc
aacagaggggctacagACTTTTTtcccggatagacaaatatcagggtaca
ataaacatcaagcttttaagtccgggaactgtcgaaattggcaatcgcat
gacaggacaaagtttttgcaagcgagggaagatatgaggattttaatatc
atcgaactaatcgaactttttactgaccgaacttcGATGGAGTTCAATTT
TGCCCACTAACAGCTTTTCTCCTTCAttgctttttttattgtttgattgC
ATCATTTACGATGATGGAATtgcaaaaaattctcgaaaaaaagcaaaaat
tataattatataCCTGGATAAGTAAGGCATGGCTTCACACTCTAAAAGGT
CTAAAAGGTTTTGTGACAACTGGAACCTTAAAATGGCCTTAGGTTCGTGG
CCAACTTCCTAACTAGGGTTCaccaaattttattcaaatctaACTGGGGG
CTTTATTCTGATAAAGTGCATTTTTAAAAACTCACCCATCATTTTGGAGG
CCAGATCCATATAAATAAATGCATAAAATAACATAATTCACattaccggg
tgacccacgaaaaagtataagagtttggagggtacctgtgtccgaaaaaa
tgtgaattttaactaaatcttttttcatggCAAAGAGGAATagggcggtc
atcgaaaaaatgctctgttcgcgtcgcaacgggtgttaaaaatgcatgcg
ggcgatcaaaaacattcccgggtttttttaatcacgccagtaactcaggg
gcgggtggtaacgcgagcaaaacaatttttcgatggtcgtcagagcaatt
gagaaaaaagctatattttaaaagaacaaattgcttttcccagatttttt
tccgcatcttcgcaccggaaaatcagcggaaaatttgatgcgggcgggtg
acgcgaatagaacaattttgcGATGACTGCCTaggtaaacttaaattttg
atgtattattttttaattttggaaaagtagttatcgagatatatggaggt
ataaagtcaaaagtcattataaaaacagtCAAGTTTacattcaaaaattg
tttttcagtTCACTGAAGAAAGGATTGGCAGTGCTGAAAAGACAGTCTAC
GATGCTCAATTTGAGAACCTCAATCTTCGCGCTGATCGAACCAAAAACAT
CACTGAGAAACTTCTACGTCAGGGAGAGGCCATGGTTCAACCCAATCCGA
GTAAGAGTTTTAGTTCACTTTGAgtttgaaaaaaggaaataagTTCTTCG
CacaatttaaatttcattttcacacaTTACATAACTCAAATTATTGTTGA
CGAgatcttttttggaaaaggtGACCTCCCTcagtttccaaaaaaaagtt
cgGGACCCCCTTGgattattttttcatgtttttttaccACCGTGGATCTT
TTTATTAAATTCCAGACCACCCTAGACATCATACCTCCCGAACAAAGGGg
atacagactatttctggaatagcccaataataCTAATGGAGTTTTTTCAT
AGCTTTCAAGTTTCAAAAAAGGTttagaaagtgaaagtaaaccTGCGAAT
GctaaaatacaaagaaatcttTGTTTAAAATCTCAACATCCGTTTAGGTG
TAAGGATAGAAGAATATATGTATGAGAAATTGGATAAGAAGAATCCTCCA
CGCCCAACCAATGCTTTCATACTGGGTCAAACGATGCAAGATGCAAGTCA
AGATATCGGCCCCGGTACAGCTTATGGTAAGATGCTTTGATCAATgcctt
attcatgatatgcaccattgcaatgccttctgtttgtttttttcacccaa
tacgtcactttttctattatttaagtgacgtattgggtggaaaaatttaa
aagttctctgaagactctccagtggtgcatatcatttATTGAAGGATGCT
GTTACGTCATAAATAGATTTCATTCATTATATCtttaagtggattaaatt
ttgcgaattttagccatttacttgaaatttatgAATCATCCAGGACTGAG
AATTTTAAGGattaaaatgatagaaattagttaaaaaggatttgccaaat
ttggttcacgcgaaaatttgaaatcttcaatTTGCGAAAAAGTCCACGCA
AAAATGTAGCCCCCATGAAGCCACTCGAATTATTTTGGAAACAACACAAT
GTGTTCGCCTTGTGCATTTGAATGCACGGTATATGGAATGGACCAtgatg
tttttgattttatagtttaaatataaaaaaaagatcCCCTTTTCTTCCGT
TCACAAACTTCTTGAATTTGCTTGAACTCTCCCTCAGACTCGCTGTATAT
TCATGCATAAGCAATTTCgacattgtttttattttcggaTATTTCAGGTT
CAGCTCTGTCACAATGTGGAGGTACAATGAAGAAGATGGGAAATGCTGAA
AAAGATTTTATGCAGAAGTCCATGTCTCACTTCTTACACCCTCTCAAAAG
CTTCTTGGATAATGAAATGAAAACCATTATGGTGAGATATCTTTTCTTTT
CCCATTAATTTGTTGATTTGGTATCAGTCTTAAATAATTTGCTATTATCT
ATGAATTCATTACTGTGTAAATTTGTATTGCATTTTTGATGTCAGTTGTC
TTTTATTGACTCTTTTGTTTTCCACAGTGTTGACCTTAAAATGTCACAAA
AGCCTGTGTATCGTCAGAAGTTTTAATCGAAGGGTTCCTTTAAAATGTGa
cattttcaaactgttttacAGCACGTTCACGTTTTGAATAACCTTTAGTT
TCTAACGAGcctttagaccatgttcagacgttacggttccatttcgctcc
gaaacgaaacggttccgaaacaagtgtgaacgtcaaaattcaaaacgcca
aaaaagaagacgttacacagTAAGAAAATATCGCGAAACGGTtttgctcc
acttttttcatcggaatggaactgctccgttttcttgcactgaaacgttc
cgaaactaatatgaacactctcgatccgtaacgaaaatcacaccgaagcg
aaacggaaccgtaacgtctgaacatgatcTTAGTTTCTAACGAACCTTGA
TTCGTTGCCTTTTTATACAAATTCTCCCcttttacagaaagaaaaacgag
caCTGGAAGTGAAGCGACTTGATTTAGATGCGTGTAAAAACAAAGTCAAG
AAATCTCAAACCCCTGAAAAAATGCGACAGGTAAGAAATAAacttaatat
ttttaaagacttcTCTCCAGCTAAACTGATTCTCAAAAAGTACTctgctt
cttcatttttcattcttccATTCTTCGTTTCAACCTTCCTAAGGCCAACT
TTTTGggtaaaattgataaatttgacGGAAGTCTTTTATGTCATATGGAT
GTAATAGTAATATGGATAGACAAGTTCGCAGACCAATCTGTAAGCACATT
GGCCTTCTCTATGAACCGCACTTAtcgtttacaatttttttaaagtagaG
TATTTTTCTTTGGCTCCATCTGACTTTCAATTTGAAATTCTTATCCTTGA
TTTTTTCGTTCATTTCGTTGGCTTCTTGGCACAGTTCCTTAATTATTTAT
CATTCATTTTAGGTGAGATCTTCTATCATTCGGTATTGCTGAAAACCGTT
TCGTTCGGTGATGGGTTTcagcaaagtttttttttgtcttcCTCATTTGC
TCATTTActtaactctttttttttcaggctgAATCCGAATTACGAGCTGC
TCAATCAGATTTCGACCGACAACAAGAAATTACGAGGTTGCTTTTAGAAG
GCGTCTCCACTGCACATGTGagtatcattttcactgaaaccAAAATTCAT
TTGTAGATCTGAGTTACGGAGGGAAAAGAAGACCCGAAGGCACTAAGACA
AGCGGGCAGAAATGGGCACCAATAGAATTGATTTCTGAAATTGCATCTTT
ACTTTACATTGCAGTTGAGAATTCGGTGGGGTTCATATCTTCCCTATTCT
AAAATGGAAGTTGTGAGTGAAGAAAAATTTTGCGATTCGCATTATTTTAT
TCTTCCTCTTTAGAAAATATTTCACTCAGCAAATCTTTTCATAATCGAAA
AATGTTTGCTCACATCTTTTGCTTGTTGTTTAGGGCAACCATTTAACAGC
TTTACATAGTTACGTTGAAGCCTTAGGAACCTACCATCAACAATGCCAAT
CGTATATCAATGAACTTCAACAGACGTTAGAAAAGTAAGAGATCTCTTAT
TTCGTTTTATTTTTTGGATGAATAAAATTCATTAAATGTCCTTTTTTAAG
GTTTTAGGAAAAAAACATGCTAGGGTTAAACAAAGAAAACTACTTGCTAG
TTCCCTTGTTTTTTGAGGTATCAATATCAACCGCTTGACAATCTGCTata
gtccggcggcgaaaagggcttttttgcatcaaaactgattgtgccatcag
atagagcttgaagagcagatctccaaaatggggtcatttgtctcatttgg
cggacttagtcccccggaattggctgatacgtgataaaatattgcatttt
tgaagacgtatcagccaattccgggggactaagtcagccaaatgagacaa
atgaccccattttggagatctactcttcaagctctatctgatggtaCAAT
CAGTTCTGATGgtacaatcagttttagctaaatgagaacttcaaaaatcg
actttctaaggacccccaggctaaaatgaccctacccccttcaagccccc
ataaaaaaatttccccgcctttgccagcttggcaaaaaccggttttgggg
tcccaagggaccatataatgagaaaataaaataaaaacccatatttacta
cttgtaagGGTAATTCtggatcgccgccggactaCTATCCTTTAAGCGGT
TCTGCTTAAGTTATTGAGCACAAGCTTCTTGCATCATTGTAAAGTGTATA
GGAAAATATTTGCAAGTATGCTAGTCTGCGTATAGTCACTTCTTTTTCTC
CTCTTGATTATACGAACCTTGGAGAGTCAGGTATTCgagcatgaaggtaa
taaagatagatggagagtcaatgccttttgttctattctgatttatcatc
ggaagcaaacagctgtttggttgctttgggaataagatgattaattttgg
gtatactcgtgggaatatttaagttcataaaaaactgaataaaaagatgt
tggatttttaacaactctattgtgagataataattttgttgatcaaaata
agaaaaaggttgccgtaacaagcacagaatcctatatttctaagggtccc
ctctcataaaatcatcgataaatttcaaaaagaattctatattacgatta
ggtaaccttttaattaatcatccatcagaatttgaaaaccccctcccttt
tagacgtaaaggtttttaatgaagaaattttcaaggaaaatgtgctaAAA
CTCTCAAAATTGTTCGCCCAAAAATAtcgatatgaaatcatagaactttg
agaaaattatttttgtatcgcgtttgaacaagagctttttgcataataag
tttatttcaatcaggataacattctcacttctgttcttataaatttacat
ttcggatttttttgcttccaatgatggtacataaaaaaaaagccgctttg
aatagatttataaaagatttcaacgatcatttaggtcattaccgagacgt
tttctctccatctatatctttattaccttcatgattcgaggtgtcaaaat
ttgaatcatGGTAAGAAATCCACAAAGGCGGTTTTTCGACGATAG Coding sequence (CDS) from alignment at sc0000102_pilon:349896..356640+ >XLOC_036124 ID=XLOC_036124|Name=XLOC_036124|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1626bp|location=Sequence derived from alignment at sc0000102_pilon:349896..356640+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCCGGAGATGGAAATGAATACAAAGATTCTTTTATGAAGATGGCCAG
CTCAGCCTTTACTGCAAGCAAGACTGGTTGGACAAGAGCAAGACAgATGG
CCGGAGATGGAAATGAATACAAAGATTCTTTTATGAAGATGGCCAGCTCA
GCCTTTACTGCAAGCAAGACTGGTTGGACAAGAGCAAGACAgtTCACTGA
AGAAAGGATTGGCAGTGCTGAAAAGACAGTCTACGATGCTCAATTTGAGA
ACCTCAATCTTCGCGCTGATCGAACCAAAAACATCACTGAGAAACTTCTA
CGTCAGGGAGAGGCCATGGTTCAACCCAATCCGAtTCACTGAAGAAAGGA
TTGGCAGTGCTGAAAAGACAGTCTACGATGCTCAATTTGAGAACCTCAAT
CTTCGCGCTGATCGAACCAAAAACATCACTGAGAAACTTCTACGTCAGGG
AGAGGCCATGGTTCAACCCAATCCGAGTGTAAGGATAGAAGAATATATGT
ATGAGAAATTGGATAAGAAGAATCCTCCACGCCCAACCAATGCTTTCATA
CTGGGTCAAACGATGCAAGATGCAAGTCAAGATATCGGCCCCGGTACAGC
TTATGGTGTAAGGATAGAAGAATATATGTATGAGAAATTGGATAAGAAGA
ATCCTCCACGCCCAACCAATGCTTTCATACTGGGTCAAACGATGCAAGAT
GCAAGTCAAGATATCGGCCCCGGTACAGCTTATGGTTCAGCTCTGTCACA
ATGTGGAGGTACAATGAAGAAGATGGGAAATGCTGAAAAAGATTTTATGC
AGAAGTCCATGTCTCACTTCTTACACCCTCTCAAAAGCTTCTTGGATAAT
GAAATGAAAACCATTATGGTTCAGCTCTGTCACAATGTGGAGGTACAATG
AAGAAGATGGGAAATGCTGAAAAAGATTTTATGCAGAAGTCCATGTCTCA
CTTCTTACACCCTCTCAAAAGCTTCTTGGATAATGAAATGAAAACCATTA
TGaaagaaaaacgagcaCTGGAAGTGAAGCGACTTGATTTAGATGCGTGT
AAAAACAAAGTCAAGAAATCTCAAACCCCTGAAAAAATGCGACAGaaaga
aaaacgagcaCTGGAAGTGAAGCGACTTGATTTAGATGCGTGTAAAAACA
AAGTCAAGAAATCTCAAACCCCTGAAAAAATGCGACAGgctgAATCCGAA
TTACGAGCTGCTCAATCAGATTTCGACCGACAACAAGAAATTACGAGGTT
GCTTTTAGAAGGCGTCTCCACTGCACATgctgAATCCGAATTACGAGCTG
CTCAATCAGATTTCGACCGACAACAAGAAATTACGAGGTTGCTTTTAGAA
GGCGTCTCCACTGCACATGGCAACCATTTAACAGCTTTACATAGTTACGT
TGAAGCCTTAGGAACCTACCATCAACAATGCCAATCGTATATGGCAACCA
TTTAACAGCTTTACATAGTTACGTTGAAGCCTTAGGAACCTACCATCAAC
AATGCCAATCGTATATgtgtcaaaatttgaatcatGGTAAGAAATCCACA
AAGGCGGTTTTTCGACGATAGgtgtcaaaatttgaatcatGGTAAGAAAT
CCACAAAGGCGGTTTTTCGACGATAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000102_pilon | genome | sc0000102_pilon:349896..356640 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 760-813:6692 |
| Aaloc | 685-756:5084 |
| Aaloc | 595-684:4678 |
| Aaloc | 502-594:4088 |
| Aaloc | 370-501:3350 |
| Aaloc | 241-366:2600 |
| Aaloc | 97-237:2059 |
| Aaloc | 1-96:1 |
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