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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000011_pilon:1520058..1522292+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_036101 ID=XLOC_036101|Name=XLOC_036101|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2235bp|location=Sequence derived from alignment at sc0000011_pilon:1520058..1522292+ (Clytia hemisphaerica_ch_hm2_pilon)
AAGACATTGATCATCTTCACCATCATCTTTGGACATCATGTGATCACATC
CTTTTCATGTCCTATAGAATGTACTTGTGATCAAACCACAAAGACAGTCA
CTTGTATTGGGAAAGAAAAGCCACTCAATTCCATTCCAAAAGACATCCCA
AGGGACACCGAAGAGTTATATCTAAACAATAACAATATACAGCAAATCTC
CAGAGCTGACTTGGCTGGACTCAACAATCTACGTAAATTGTACCTACACA
AAAACCATATAGCTCATATAGATGAGTATGCATTCACAGACCTGCATAAT
TTGATAGAACTGAATCTGAGTAAGAATTATCTATCATATATCACTCAATA
CACCTTCGTTGGATTATGGAGATTAAAAAGTCTCTGGTTATCTGAAATTC
ATTCACACATTGTGCCATGTATTGACGATTTTGTTTTTACTCAAACACCA
TCTTTGGAAGATCTTTTCTTAACCAAAAATTACTTCCATTTCATATCCAA
TAATCTTTTCTCCGGGTTATCAAAACTGAAGTATCTAACAATCTCattga
atcaaatcaataaaatcaacAGCCTAGCGTTCTCACATTTTTCAAAGGAT
GTTGATGTACATTTAGGTCGTAGCTATTTATGTTGCTGTTCGACTGCAGC
TGCAATTGAGTCATTGATGATTAAGCCTTCGGTTAAATGTACCATCAAGG
ACTGTTATAATGCTGAAGGTATCTGTAACCGTCCATATGACACCACGTGT
CTTAGGAAACTTACACCACCAACAACGTCTATCCCGGACAATCCAGAATC
CGACATTTCCAAACCCACAGATGCTGTAGTTCAAACAACACCAATTACAA
CAACTCCTTCAGAACCAGAGCCTGTTCGACCAGCAACTCCAAGAAAAAGC
AGTATCTGTCCCGAAGAATGCAAATGTTATAATGACTTTAAAGATGTACt
ttgtcatcaaaattttttatctgcAGTACCGGGTAATATACCAAATGAAA
CTGAGAAACTTATACTGAATGATAATCTGATTACTCGAATCAGAAAATAT
GATTTCTACGATTTGCCATATTTGAAGGAACTATATTTGCATAACAATAA
CATTGAAAGACTCGATGATGGATGCTTCGAGGAGTTGGGGAATTTGACTT
CACTCTTTCTGTTGAACAATCACATCGATCACATAAGTCCACATACCTTT
CAAGGACTTGAGAATTTAAATCATCTCTCACTTTCAAATCTTAATACGAA
AAGGACACTTATCAATATTGAGCATGGATCTTTTCAAATGCTTGGAGAAC
TCGAGAGTCTGCAGTTGAATGGCAACAGATTTAGGTGCCTGTCCCAACAG
ACCCTGATCGGCCTTGGTAGTCTAGAGACATTAACCGTATCCCTGCACCT
AATTGAAGTGTTACGCTCGGATGTATTTGATGGTCTACCGGCAGACGTAA
CAATACAAACTGACATGTATGATATGGCAATATGTTGTTGCACAACTGCC
TTAGCAATCCATAAAACTAAATCTCTGGCAAAATATAACACTCAATGCAA
TCTGGAAACATGTTCTAATGATAAAGATCCGGTCTGTAAAATGTCCTTTT
CATCAACCACCGAAGTAATTACAAGCGATAAATCTACTGCTATAAATCTT
GAATCTACATTTGAGAGCACTATTCGAACAACAGAGCGATCAACAATCGA
TTATCTCCAAAGATCCTTATTCaaaagtaaagataccaaagaagaggaag
aaaaagacaatgaggagaaggaagaagaagaagatgcaGATGCTGACGTA
GCCGGTTCTGACAAAAAGGAGCCCATTTCATCTGATGATAGCTCACCCAT
CCAACCATCCAGCCCATTAATCACACCTCAAACAATTGATTCAACCACGA
ACCTTAACGATTACATTCAAAGATCTGTACGCTTCCTATCATCCCAATCA
TCTTATTTTCAATCGTCGCCATCATTGTCATCTATGTTCTACGACGATCT
CCACACTCAAACACCATCAAGGAGCACTACAAAAGTTTCCACAAATCAAT
ATCTGAATTCAACAATAAATTCTACATCATTGAAGAATTTCAATGCATCC
GACAATCTGAATCCAACAATCAATTCTACGTCATTGAACATTAGTTTCAA
TACATCTGAGAACACGACATCGTCTCATAGCATCAACACAAGTTCCACCA
TAAATTCATCATGGAGTCAGCAAGGAAATGATACA Coding sequence (CDS) from alignment at sc0000011_pilon:1520058..1522292+ >XLOC_036101 ID=XLOC_036101|Name=XLOC_036101|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4470bp|location=Sequence derived from alignment at sc0000011_pilon:1520058..1522292+ (Clytia hemisphaerica_ch_hm2_pilon)
AAGACATTGATCATCTTCACCATCATCTTTGGACATCATGTGATCACATC
CTTTTCATGTCCTATAGAATGTACTTGTGATCAAACCACAAAGACAGTCA
CTTGTATTGGGAAAGAAAAGCCACTCAATTCCATTCCAAAAGACATCCCA
AGGGACACCGAAGAGTTATATCTAAACAATAACAATATACAGCAAATCTC
CAGAGCTGACTTGGCTGGACTCAACAATCTACGTAAATTGTACCTACACA
AAAACCATATAGCTCATATAGATGAGTATGCATTCACAGACCTGCATAAT
TTGATAGAACTGAATCTGAGTAAGAATTATCTATCATATATCACTCAATA
CACCTTCGTTGGATTATGGAGATTAAAAAGTCTCTGGTTATCTGAAATTC
ATTCACACATTGTGCCATGTATTGACGATTTTGTTTTTACTCAAACACCA
TCTTTGGAAGATCTTTTCTTAACCAAAAATTACTTCCATTTCATATCCAA
TAATCTTTTCTCCGGGTTATCAAAACTGAAGTATCTAACAATCTCattga
atcaaatcaataaaatcaacAGCCTAGCGTTCTCACATTTTTCAAAGGAT
GTTGATGTACATTTAGGTCGTAGCTATTTATGTTGCTGTTCGACTGCAGC
TGCAATTGAGTCATTGATGATTAAGCCTTCGGTTAAATGTACCATCAAGG
ACTGTTATAATGCTGAAGGTATCTGTAACCGTCCATATGACACCACGTGT
CTTAGGAAACTTACACCACCAACAACGTCTATCCCGGACAATCCAGAATC
CGACATTTCCAAACCCACAGATGCTGTAGTTCAAACAACACCAATTACAA
CAACTCCTTCAGAACCAGAGCCTGTTCGACCAGCAACTCCAAGAAAAAGC
AGTATCTGTCCCGAAGAATGCAAATGTTATAATGACTTTAAAGATGTACt
ttgtcatcaaaattttttatctgcAGTACCGGGTAATATACCAAATGAAA
CTGAGAAACTTATACTGAATGATAATCTGATTACTCGAATCAGAAAATAT
GATTTCTACGATTTGCCATATTTGAAGGAACTATATTTGCATAACAATAA
CATTGAAAGACTCGATGATGGATGCTTCGAGGAGTTGGGGAATTTGACTT
CACTCTTTCTGTTGAACAATCACATCGATCACATAAGTCCACATACCTTT
CAAGGACTTGAGAATTTAAATCATCTCTCACTTTCAAATCTTAATACGAA
AAGGACACTTATCAATATTGAGCATGGATCTTTTCAAATGCTTGGAGAAC
TCGAGAGTCTGCAGTTGAATGGCAACAGATTTAGGTGCCTGTCCCAACAG
ACCCTGATCGGCCTTGGTAGTCTAGAGACATTAACCGTATCCCTGCACCT
AATTGAAGTGTTACGCTCGGATGTATTTGATGGTCTACCGGCAGACGTAA
CAATACAAACTGACATGTATGATATGGCAATATGTTGTTGCACAACTGCC
TTAGCAATCCATAAAACTAAATCTCTGGCAAAATATAACACTCAATGCAA
TCTGGAAACATGTTCTAATGATAAAGATCCGGTCTGTAAAATGTCCTTTT
CATCAACCACCGAAGTAATTACAAGCGATAAATCTACTGCTATAAATCTT
GAATCTACATTTGAGAGCACTATTCGAACAACAGAGCGATCAACAATCGA
TTATCTCCAAAGATCCTTATTCaaaagtaaagataccaaagaagaggaag
aaaaagacaatgaggagaaggaagaagaagaagatgcaGATGCTGACGTA
GCCGGTTCTGACAAAAAGGAGCCCATTTCATCTGATGATAGCTCACCCAT
CCAACCATCCAGCCCATTAATCACACCTCAAACAATTGATTCAACCACGA
ACCTTAACGATTACATTCAAAGATCTGTACGCTTCCTATCATCCCAATCA
TCTTATTTTCAATCGTCGCCATCATTGTCATCTATGTTCTACGACGATCT
CCACACTCAAACACCATCAAGGAGCACTACAAAAGTTTCCACAAATCAAT
ATCTGAATTCAACAATAAATTCTACATCATTGAAGAATTTCAATGCATCC
GACAATCTGAATCCAACAATCAATTCTACGTCATTGAACATTAGTTTCAA
TACATCTGAGAACACGACATCGTCTCATAGCATCAACACAAGTTCCACCA
TAAATTCATCATGGAGTCAGCAAGGAAATGATACAAAGACATTGATCATC
TTCACCATCATCTTTGGACATCATGTGATCACATCCTTTTCATGTCCTAT
AGAATGTACTTGTGATCAAACCACAAAGACAGTCACTTGTATTGGGAAAG
AAAAGCCACTCAATTCCATTCCAAAAGACATCCCAAGGGACACCGAAGAG
TTATATCTAAACAATAACAATATACAGCAAATCTCCAGAGCTGACTTGGC
TGGACTCAACAATCTACGTAAATTGTACCTACACAAAAACCATATAGCTC
ATATAGATGAGTATGCATTCACAGACCTGCATAATTTGATAGAACTGAAT
CTGAGTAAGAATTATCTATCATATATCACTCAATACACCTTCGTTGGATT
ATGGAGATTAAAAAGTCTCTGGTTATCTGAAATTCATTCACACATTGTGC
CATGTATTGACGATTTTGTTTTTACTCAAACACCATCTTTGGAAGATCTT
TTCTTAACCAAAAATTACTTCCATTTCATATCCAATAATCTTTTCTCCGG
GTTATCAAAACTGAAGTATCTAACAATCTCattgaatcaaatcaataaaa
tcaacAGCCTAGCGTTCTCACATTTTTCAAAGGATGTTGATGTACATTTA
GGTCGTAGCTATTTATGTTGCTGTTCGACTGCAGCTGCAATTGAGTCATT
GATGATTAAGCCTTCGGTTAAATGTACCATCAAGGACTGTTATAATGCTG
AAGGTATCTGTAACCGTCCATATGACACCACGTGTCTTAGGAAACTTACA
CCACCAACAACGTCTATCCCGGACAATCCAGAATCCGACATTTCCAAACC
CACAGATGCTGTAGTTCAAACAACACCAATTACAACAACTCCTTCAGAAC
CAGAGCCTGTTCGACCAGCAACTCCAAGAAAAAGCAGTATCTGTCCCGAA
GAATGCAAATGTTATAATGACTTTAAAGATGTACtttgtcatcaaaattt
tttatctgcAGTACCGGGTAATATACCAAATGAAACTGAGAAACTTATAC
TGAATGATAATCTGATTACTCGAATCAGAAAATATGATTTCTACGATTTG
CCATATTTGAAGGAACTATATTTGCATAACAATAACATTGAAAGACTCGA
TGATGGATGCTTCGAGGAGTTGGGGAATTTGACTTCACTCTTTCTGTTGA
ACAATCACATCGATCACATAAGTCCACATACCTTTCAAGGACTTGAGAAT
TTAAATCATCTCTCACTTTCAAATCTTAATACGAAAAGGACACTTATCAA
TATTGAGCATGGATCTTTTCAAATGCTTGGAGAACTCGAGAGTCTGCAGT
TGAATGGCAACAGATTTAGGTGCCTGTCCCAACAGACCCTGATCGGCCTT
GGTAGTCTAGAGACATTAACCGTATCCCTGCACCTAATTGAAGTGTTACG
CTCGGATGTATTTGATGGTCTACCGGCAGACGTAACAATACAAACTGACA
TGTATGATATGGCAATATGTTGTTGCACAACTGCCTTAGCAATCCATAAA
ACTAAATCTCTGGCAAAATATAACACTCAATGCAATCTGGAAACATGTTC
TAATGATAAAGATCCGGTCTGTAAAATGTCCTTTTCATCAACCACCGAAG
TAATTACAAGCGATAAATCTACTGCTATAAATCTTGAATCTACATTTGAG
AGCACTATTCGAACAACAGAGCGATCAACAATCGATTATCTCCAAAGATC
CTTATTCaaaagtaaagataccaaagaagaggaagaaaaagacaatgagg
agaaggaagaagaagaagatgcaGATGCTGACGTAGCCGGTTCTGACAAA
AAGGAGCCCATTTCATCTGATGATAGCTCACCCATCCAACCATCCAGCCC
ATTAATCACACCTCAAACAATTGATTCAACCACGAACCTTAACGATTACA
TTCAAAGATCTGTACGCTTCCTATCATCCCAATCATCTTATTTTCAATCG
TCGCCATCATTGTCATCTATGTTCTACGACGATCTCCACACTCAAACACC
ATCAAGGAGCACTACAAAAGTTTCCACAAATCAATATCTGAATTCAACAA
TAAATTCTACATCATTGAAGAATTTCAATGCATCCGACAATCTGAATCCA
ACAATCAATTCTACGTCATTGAACATTAGTTTCAATACATCTGAGAACAC
GACATCGTCTCATAGCATCAACACAAGTTCCACCATAAATTCATCATGGA
GTCAGCAAGGAAATGATACA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000011_pilon | genome | sc0000011_pilon:1520058..1522292 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1-2235:1 |
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