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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000011_pilon:1697880..1701873+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_036043 ID=XLOC_036043|Name=XLOC_036043|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3994bp|location=Sequence derived from alignment at sc0000011_pilon:1697880..1701873+ (Clytia hemisphaerica_ch_hm2_pilon)
CCACAAGATGGTCACTGGGGACGATGGTCTTCCTGGGGTGAATGTTCACA
CCAATGTGGAGAGGGAAAAGAAAAGCGAACACGAAAATGTGATGATCCTG
AAACAAAGAATGGAGGAAAGAATTGTCCGGGTGAATCTGTTCAATCAAAA
GATTGTTACATTAAACCATGCGCATTGGGTATGATATATTCGATGATACT
GTCAGGtttttttATGATATCGTAGATTTTTTGTGcattagctctagttt
agacggtcgactttctgccctgtATATTCAATCGTTGAAGTGTGCTAAAG
ATACgctgcgacttgacagacgcAAGCTTCCAAGCCCTGGCGTATAACAT
GACACctgaacgacactgggagagcgatgtTCACGTGAGGCCAAACCTAA
TGAGTGCCATGGCACGTCATTATGCCAGCCACACTCTTGGGCAAAAAGCG
GGCAAAAAGTTGGCAgttatttgcttgaaaaagattgaaagaagacattg
cacattgacgtcaaaagatggAAATGCATGTACTTTAAACAGCCAATATT
CTGCCCGCTTtcattcacaattagaatagggaGGACGAAAAGTGGGCCGT
TTATACTGGAACTTAGAACTTCAACCAGCTTAAAAGTCAAGCACAGTGGA
AAAGTCACTTTAACGACGAGAGTTTCCTCTAGAAAAACAACCTTTTTAAA
AGGATATTAGAACCATCCCCAAGATTTGTTCAAATATGTCTAACACCATT
TCAAAAACCATGTGATAAAACCATATGATACGGTGGAGTCTCTTGAACTa
gaatctctataactcgaacaagttttatggtctcttcagttaacaatggg
cttttccagaaaaaaattgaatatggggggggggtggaggatggaGGATA
ACAATTTTCAGTAATTTACCCCCcagacaaagtgacttttgaccccccgg
acaacgggttttaccccctggacaagcatcagttgacccccggacaaccc
aaaattacccctggacagagcaaatttaccccccggacaatatatcctcc
acccccatgtacggacattttctggaagagcccaatgcctTTTAAAAACG
TTactccataattcgaaattcctttaattcgaacaaatttgcgttccccT
GTCCGTGTTATTgagattttgataaattttggaGGTCATCTTCGCTATAA
CTCGTAACTGGCCACTTAGCTTGTTGGATTCATTCATTTATTAACGAAGA
TGTCgacaatatttgaaatttttagaaccGGATGATTGTTTATTCGACGG
GCAAGGAATGTGTTTTTGGCAAGACAAATCATATGATAAATCATACATGT
GGAAAAGAGTTACCGGTGGAACACCGACTCCTTCCACTGGCCCTGATTCT
GATCATACAACACAGAACACTACTAAAAACGGTAAGAAGATTATATTTCA
ACTgatatattcacttttttttgaacGATACTTCGATGATTGCATGAGAA
CGTGAGATTCCTGAGATGTGACGAAAACTTGAAAACTGATTCAGAACAAT
CTTAACCTTTTGTTTTGGAAACATTTCAATGTAGATAAGATCTTTTAGCC
CCTATATCATCTCATGCTCAAGGGTTTCAAGAATATAATTATTCAAATCT
GtaaatttcggaaaaaaatgAGAACCGCTGAGctccagtcaaaatttact
gtttaatatatagttgacgctctctaattcgacgttctactattcgatag
gctcccttattcgatgagaatccaattccccttgaagatcgaattagaga
gtgccAACTGTGTGTTCCAAATGATTCTTTCAGGTCACTACATGCTTGCT
GAATCATCATCACCCGCCAGACTTGGAATGAAAGCTTCTCTGGTCAGTAA
AGTGTTCAAATCAACAACATCGGTCAAATGTTTAACATTCTTCTATAGCA
TGCATGGAATGGGGATTGGAGTTCTCCGTGTTTTTGTCAAGTTTCCGTAT
TCAGGTACTGTTGAAATTTAGCTACACTGAAACGCCAGTCGGGCTAGACC
gatatcacgcgggaaaagtgaacGTAGGAGTTAGGTgtgcgtaggaagaa
attttgtcggcggggCAGATTCTAGCCACATACTAAATTTGTAGGTCTTC
GGCCACTGGAAAACCGTAAGTTAAAGTTTTGAAGGTCTTCGGCCGCTAGC
GTAGGTCTTCGTCCGTTGACGGaaaaaaaTCTGCGTCGGCGGGAAGGAGT
GAAAGTTAATTAGCACCCTCTCACCAACTTccgctcgttctcctacgcag
cttcTATTTCAACAATCACCCAGCCGCACGCGCTCGTGTTTTTGCTCTCT
GAATGaataattaacagactagtttacTATTTTGGCCATAACTCACGGAT
GGGGTTAGTACTCTTGATGACAGATGAGGATAACCCCTAGATTTGAAATA
AATAAGCTCAGCCAGATATCAAtttatattttcgaaaaaattagaCCCTA
CTAGaaaaaaaGAACCTGAAAGATAATATTGGTATGTGATAAATTTAGTa
gattttgattaaattttgcgacAAACTCAGACACTGAAAAGAGGGATCCT
AACAAAAGGGGCATATCCCATACCCATCTTCGCCTTAGTGAATCCACAAC
TCGGCCAAATCCTCAGAACTAAATTATTATTAATGGGattttccagaaag
aaattgaatatgggggtggaggatataacccTTATTGGAGATTTACCCAC
Ggatattgtgacttttgacccccggacagcaggtctagccccctggacaa
gcatcagttgaccccatgAACATTCAAAAGTTTCCCTCAAATTGAGCAAA
ATTagccccaaacagagcaagtttaccccccccccccggacaaggcaaat
tttgtagatttttcactacccccggccCCCGggcactatatcctccacct
cccccccccatgaacggacattttctggaagaacccAATGACATATTTTA
AAATTAAGAAATGGGATTCTTCAATGGTCTATCATATTGGAGTcttgaca
tcaattttttcaacatccaTTCGTTTtaggaaaagaaaataaagtttgGG
AAATGATAGGTCCACAAGGTCCAGGATGGAAAGTAGCTGAAGTAGACATC
CCTGAAAAACCTGATAATTACAATGAAAGGAATTCTTATATCTTTCTTGA
CTACAAGGTATATTCTTTTAAGGTCTTTATCTAATTTTATGTCCTTTATG
TCctattttcgcgatttttttaattttgattgcGTACAAAAGTCGCTGAG
CACAAAGCAGACAGAGATTAAGTACACAAACATTTTTGCGTTCTTGGTAA
GACCCGACCAATTGAACCGCCGACCTTTTAAATcatatgttgaacggtga
aaaagaatgctgCTATTATAtacatgtttcggactcggtccgCTCTCAAG
GGAATGAAGATAGATATCCTATAGATTACAGTCACTATAATTACCTTCCa
ttagttccatttatacttagacggaaaaatcgtctgagacgagAAGTTTa
taaaatgtgatctgtggaggatatcctatttattgaaacaagtacactcc
tccataatgctcattttctaaattgctcgtctcagacaaattaatcgttt
cagtataaatagaacCATTCTCTTTAAAGATACGTTTCGAAGCAGAGCGT
GGACACAGTTTTCAAGGAGACATTGCATTGGATGATATTTTTATTGTTAA
CTCGCTATGTTCCAAGaaaaaaaCACTTGTTCCGATACTGAGcaccaccc
caacgaccaccactactacaacaacgaccaccactactacagcaacgacc
accccaaCTACAGcaacgaccaccccaactacaacaacgaccactccaac
tacaacaacgaccactccaacgactacaacgaccaccccaacaactACCA
CGTCCACCCCAACCACTACTACCGGTATGTCTGATACTCTTTAG Coding sequence (CDS) from alignment at sc0000011_pilon:1697880..1701873+ >XLOC_036043 ID=XLOC_036043|Name=XLOC_036043|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1896bp|location=Sequence derived from alignment at sc0000011_pilon:1697880..1701873+ (Clytia hemisphaerica_ch_hm2_pilon)
CCACAAGATGGTCACTGGGGACGATGGTCTTCCTGGGGTGAATGTTCACA
CCAATGTGGAGAGGGAAAAGAAAAGCGAACACGAAAATGTGATGATCCTG
AAACAAAGAATGGAGGAAAGAATTGTCCGGGTGAATCTGTTCAATCAAAA
GATTGTTACATTAAACCATGCGCATTGGCCACAAGATGGTCACTGGGGAC
GATGGTCTTCCTGGGGTGAATGTTCACACCAATGTGGAGAGGGAAAAGAA
AAGCGAACACGAAAATGTGATGATCCTGAAACAAAGAATGGAGGAAAGAA
TTGTCCGGGTGAATCTGTTCAATCAAAAGATTGTTACATTAAACCATGCG
CATTGGaaccGGATGATTGTTTATTCGACGGGCAAGGAATGTGTTTTTGG
CAAGACAAATCATATGATAAATCATACATGTGGAAAAGAGTTACCGGTGG
AACACCGACTCCTTCCACTGGCCCTGATTCTGATCATACAACACAGAACA
CTACTAAAAACGaaccGGATGATTGTTTATTCGACGGGCAAGGAATGTGT
TTTTGGCAAGACAAATCATATGATAAATCATACATGTGGAAAAGAGTTAC
CGGTGGAACACCGACTCCTTCCACTGGCCCTGATTCTGATCATACAACAC
AGAACACTACTAAAAACGGTCACTACATGCTTGCTGAATCATCATCACCC
GCCAGACTTGGAATGAAAGCTTCTCTGGTCAGTAAAGTGTTCAAATCAAC
AACATCGGTCAAATGTTTAACATTCTTCTATAGCATGCATGGAATGGGGA
TTGGAGTTCTCCGTGTTTTTGTCAAGTTTCCGTATTCAGGTCACTACATG
CTTGCTGAATCATCATCACCCGCCAGACTTGGAATGAAAGCTTCTCTGGT
CAGTAAAGTGTTCAAATCAACAACATCGGTCAAATGTTTAACATTCTTCT
ATAGCATGCATGGAATGGGGATTGGAGTTCTCCGTGTTTTTGTCAAGTTT
CCGTATTCAGgaaaagaaaataaagtttgGGAAATGATAGGTCCACAAGG
TCCAGGATGGAAAGTAGCTGAAGTAGACATCCCTGAAAAACCTGATAATT
ACAATGAAAGGAATTCTTATATCTTTCTTGACTACAAGgaaaagaaaata
aagtttgGGAAATGATAGGTCCACAAGGTCCAGGATGGAAAGTAGCTGAA
GTAGACATCCCTGAAAAACCTGATAATTACAATGAAAGGAATTCTTATAT
CTTTCTTGACTACAAGATACGTTTCGAAGCAGAGCGTGGACACAGTTTTC
AAGGAGACATTGCATTGGATGATATTTTTATTGTTAACTCGCTATGTTCC
AAGaaaaaaaCACTTGTTCCGATACTGAGcaccaccccaacgaccaccac
tactacaacaacgaccaccactactacagcaacgaccaccccaaCTACAG
caacgaccaccccaactacaacaacgaccactccaactacaacaacgacc
actccaacgactacaacgaccaccccaacaactACCACGTCCACCCCAAC
CACTACTACCGGTATGTCTGATACTCTTTAGATACGTTTCGAAGCAGAGC
GTGGACACAGTTTTCAAGGAGACATTGCATTGGATGATATTTTTATTGTT
AACTCGCTATGTTCCAAGaaaaaaaCACTTGTTCCGATACTGAGcaccac
cccaacgaccaccactactacaacaacgaccaccactactacagcaacga
ccaccccaaCTACAGcaacgaccaccccaactacaacaacgaccactcca
actacaacaacgaccactccaacgactacaacgaccaccccaacaactAC
CACGTCCACCCCAACCACTACTACCGGTATGTCTGATACTCTTTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000011_pilon | genome | sc0000011_pilon:1697880..1701873 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 634-948:3680 |
| Aaloc | 508-633:3082 |
| Aaloc | 337-504:1836 |
| Aaloc | 181-333:1278 |
| Aaloc | 1-177:1 |
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