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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000011_pilon:1508497..1513642+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_036035 ID=XLOC_036035|Name=XLOC_036035|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5146bp|location=Sequence derived from alignment at sc0000011_pilon:1508497..1513642+ (Clytia hemisphaerica_ch_hm2_pilon)
ATgtttcaaacatcaaaacagtttatcacagttttctttttcattcattg
tTTTGCCACcgcattttctcaaaattctgGTCCCTTCGATCAGTGTTATG
GAGATAAAGAATTGATAAATGGCTGTAGTGTGCCCTGGGGCTTTAACTTT
CCTTATAAAGGCTTGTTTACACTCGCATGTGATTATCATGATGTCTGTTA
CTCTTGCGTAAGTAGCACATTAATAAACTTCATTACATTACTGACAACGC
TTGCcttgttttgaaacttttactaAGAGCTAATTTACATTTCAGACTTT
CAGTTACAATTTAATGAATATATATCACTAATTAAAAGAAAGTCATACTT
CTAAATTAGTTGGTTTAGCATGTCGGACCATTGTCATTAGCATGTTATGT
GGTGCTGTAAATCCGTTTTTGAAGAAGTAGCCGCCAATTACCATGCGAGC
ATTTTtctgtccgttttaccaccataaaaccgtcccagtttttttCCCGc
ctaaaaacaatagaaaaaagtttaaaaaaggattggatcgagtttaggtt
ggtaaaataaataaaaaagtggcACGCGTTTGACCgcacgactacggtcg
aaaagacaTGTTGAAAGAAACGGCGCCCACGAAGGTGTATTATTACAACA
AAATATTCGACTATATTGCTATGTCTCTGGCCCTTCATGCCGCTTCGGCG
CTTGTTGTTGTTAGTAAAATgtgaataacttttgatagagctTTAACTAG
ATCACGTGTAATCATCATGTAAatgttttgaattattttttttctatttt
catcttcattttggatttttcttttctaaatatTTGTTACCCATTAGGAT
GTGAAGAAGGACGTGAAAGAAATCCCACTGGGAAATCACCCGCGGAAAGG
GAAATCCTTCTTTAGCCTTCGCATTTTCTCTCAATCTTCCGACGCCAACC
TTCGAGTAAATTATCCTTTTTCCTCCGTCTTAACTTTATACTACGTCTAA
TAACACtttttactctatttctttgtttaaggccggtctccactttcaca
CCAAATGGGCGatagttttttcttaaccttttttgtctgaagaaaagatt
tcgtaatgaaaaaagtttcgcgcaaacaaaaaaaaaatgaaggaagttct
acttttttcatgcgttacgtcaatttcgaccaatggaattgcttcatttt
tcaaccgaccaatgaatGACCTTACAAagacgtcaaaaagttttcgctca
tgtcgcgcgaaagtggagacctgcctttatttaaaaacaaatttgttttt
acacgtttttttaataagaacatccaaaatttttgaagccttcggatgtt
tttgatttttttaacttttaagccTAGAAACgatcttaacatgttcttat
tttcaccattttctgagtatttttttccattttcctaagaaattggctgt
tttagggtccgcaaagccttaaaatattcttaaattgttcttaatatttt
agccattgaagccttatgttccttatatagtttgttcttatattaaaaaa
aagtgtgtatttgACAGGCtagttaaaaacaaatttgtttttattcgaaa
GGTTAAAAGATTCACATTGGGCGATGTGAGAAAAGCGTTGGCTGTGAGAG
ATTGACTGATAGCCAACAAAATGATCTTCTGTTTCAACTGTATAGATTAC
TACTCATAAAAAGTTATTCGTTTTTGAATAACACTTACTAAAGTCCATGG
CGAAtttagtctgattcgcagacctatacttcctataagataagaaactt
ttttcgctagaggatgagcgtAAGGCCTAGGGCAAATTCTTCCGAGTGCT
AGGAAGAGGTTTCTCAACTAAGGAATAACTTCTTTTTTAGGAACTTCTTC
TGACTCATCCGCTTTCGCTTGCACTTCAATCTCCAAAGCAAAAATGAATG
TCTCTCATCTTAAGTCCATTCGTTTTaagcaataaaaatatttctcacaA
GTTATATGcctgtgaaaaagtgaaaaaaggtaTTTCCAACGAGCTACCTC
CTAGAGGCTGTAACCTAAATGGGCTAAAACAGATTATTAAACTccggtta
aggagtttcttaaaatcagtgttttatTTGTAATTGTGTGTAAATTCTTT
TGCGTTTGATTTCCTGAtctttccggtttgatttcccgatttggtttgcg
tttgcgctcgcacttactaggatatactcttttaattttcatgttagata
tattaagaaaggctgaACACGATAAAGATGTTTGCATAATGGttcgctat
tcaaaaatgacaattaccGGAGTGAGTCATTATACGGCTGTTTTATAGTA
CACTTAAATTGAATGGACTGTAATACCTATACCAAATTTCCAGAAGCGAT
CGACGCTTTAATGTCCGTGACACATCGAGTAAAAATCCtataactagcca
taactttcattaaggtgccaccgcagcaaaacgaacacatagagttgaat
ttgcgtccaaaaggaatgatcttagccctacagtaatttttgttaagagt
gacctctcatctgagacaaaattttttcaaatgctaacaaatgtgtcaag
ggagtgatttacagtctacttagagtgacatccgtgccttgtcttacacg
ttttttataaaaacaatttcataataatACCATGAACAtttaaacgactg
gacatctatcttttattatctctttgaagcgagcttcgttgccgcctgta
tttcaaaattggtatgaaaaatccgacaatattccgtcataattttattt
ctttgaattatttaggtaaaaagattgatagagcttgaacattactccta
atgtacaaaaaacttattttcgaattttttttacaagtttgtaatatatt
ttatcaacattttcaactctgaaatgcagaatttcaactgcgtgtatact
tttgaatcccttttgtcactccaatattttttttatgacctgaaaaaaat
agcttgccaaagttgagagcctgtgtaataagaatatcgaaattagaatg
tgacactctctaaaattattagacacttttaagtcaaaatttagaaatat
tagtcggagttttgacaagctgacgatgattttgtcTCTGTTaactttgt
tatgatatagataaaaggcttgagaagagtagaacaacagagatttttgt
cgaagttttgacgttgttagcaaggtatccCCAAGTGGTATAATCATCag
aatctattgtttcattttatgcttttaacgaggcggcaacgaagctagct
gtgttatcttcaaaaagacaaaggatgtccagtcgtttatatgttcatga
taatacgaagctgaaatttggccaaaacctaagaacaaattaagaagaat
ctgaaactcagatttcagaaattactgagaagtacatgtttccgctttaa
ttaatattgacatttaaggctgaaaaactcatataaatttaagagcagtC
CAGTCAGAATCGTATGACTTACtgttttttcctataaaaagcgtatatat
atctgaagatactgctcttcatatgttatttagtaagtaagtaagtctgc
gaccgcagtcggaggcgaaccgaaggctcctctttcgatagctatctacc
cgaaggtaggggagggcgccactctttctccctggatttctccacttacc
cttgatccttctcttagttgctgagcatcaagcagagaggcatcaagtac
cattttgggaatctttggtatgacccggctgggggttgaacccacaacct
tgcgaaccgtagccggatgctctaccactgtactacggccGCTACGGCCG
TTATTTAACTAATgcacacgtttagcaacataactgttcgaatactttaa
gtagagtaatatttttaacctatgaagagcgcttaataactacttgtggt
atgaaaagggaatttccttagattcatttaactctccagggataagaaaa
agacaaactgacatttcaaaatgagtaatcagatcaaaataactccggaa
aagtctttttgctgatgataaaacaatagagagaccgtaagataagaatg
ctaccgttaagcggaactaaaatactgaaaaacgcgccgcaaaattatga
gatgtttgcccaacttccttatgcgtgaagctatgaatgccatcctcaga
agctttaggcttcctccggtggcaattACTATTgatttccagaatcttta
aaataaGCACTTCTTTCAAGGCATTTTAACTCATTCGGGTGACGTGTACA
CACGTtctaaattttacaatatACCGAATCTCAGACTTTCTCTCAGACCA
TTTGATTTAAAAGGTCGTAAACTGAATGTTTTTGGAAATAGTATGAAAAT
ACCTTTCTATTGGTAAAGAAACCATTATCTAGCTCTCAAGTTACAAGCGT
TTATACACCCCTGTTGCACATctccggtggaacttttttcccaagtcggg
ataaaaattcctattgaaatcccaatggggatggaaattatattgttcaa
aggttaaaaaatccagtggcTTTGgatggagtgcaatttttaaacatgaa
atCAAAGTCTATTTCCCTaaggggctgaaattcaagggtactttttccac
cggggacggaacttttgctaaatttcccagtggggctggggtcccagcgg
gtctgtgacacaagggtgtgTTTATGCCAGTttgaatttaagtttttttt
cttctccagGCTGCTGGGCTGGAATCAACACGCACCGATTGTGACAAAAC
ATTCCTTCAAAATATGCAATATTTATGCTACAAAACCTACCCAATAACAA
ATAAACCTATTTCTTCAAGAATCTCAAGACATAAACGATCCTTTACCGCC
TGGCAAAAATTCATAGAGGCTCTGAAAGGAAGTGCTGCTATTGGCCTTGA
TTTTTGGAAATGGTTTGGTGAAACTTGGTGGACTTTGGACCATTGTTTGA
CTGGAGCACATGTCTATTTCAACGCTGTTAAACATTTCTCAATGGACTTT
TTCCATGAGGAGCCTGAAACCAAGTGTCAAATGCCATGCGCGCAAATCAT
GGGAAACCCGCGGTTGACTTTGAACTCGACCGAttcgaaattttaa Coding sequence (CDS) from alignment at sc0000011_pilon:1508497..1513642+ >XLOC_036035 ID=XLOC_036035|Name=XLOC_036035|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1188bp|location=Sequence derived from alignment at sc0000011_pilon:1508497..1513642+ (Clytia hemisphaerica_ch_hm2_pilon)
ATgtttcaaacatcaaaacagtttatcacagttttctttttcattcattg
tTTTGCCACcgcattttctcaaaattctgGTCCCTTCGATCAGTGTTATG
GAGATAAAGAATTGATAAATGGCTGTAGTGTGCCCTGGGGCTTTAACTTT
CCTTATAAAGGCTTGTTTACACTCGCATGTGATTATCATGATGTCTGTTA
CTCTTGCATgtttcaaacatcaaaacagtttatcacagttttctttttca
ttcattgtTTTGCCACcgcattttctcaaaattctgGTCCCTTCGATCAG
TGTTATGGAGATAAAGAATTGATAAATGGCTGTAGTGTGCCCTGGGGCTT
TAACTTTCCTTATAAAGGCTTGTTTACACTCGCATGTGATTATCATGATG
TCTGTTACTCTTGCGCTGCTGGGCTGGAATCAACACGCACCGATTGTGAC
AAAACATTCCTTCAAAATATGCAATATTTATGCTACAAAACCTACCCAAT
AACAAATAAACCTATTTCTTCAAGAATCTCAAGACATAAACGATCCTTTA
CCGCCTGGCAAAAATTCATAGAGGCTCTGAAAGGAAGTGCTGCTATTGGC
CTTGATTTTTGGAAATGGTTTGGTGAAACTTGGTGGACTTTGGACCATTG
TTTGACTGGAGCACATGTCTATTTCAACGCTGTTAAACATTTCTCAATGG
ACTTTTTCCATGAGGAGCCTGAAACCAAGTGTCAAATGCCATGCGCGCAA
ATCATGGGAAACCCGCGGTTGACTTTGAACTCGACCGAttcgaaatttta
aGCTGCTGGGCTGGAATCAACACGCACCGATTGTGACAAAACATTCCTTC
AAAATATGCAATATTTATGCTACAAAACCTACCCAATAACAAATAAACCT
ATTTCTTCAAGAATCTCAAGACATAAACGATCCTTTACCGCCTGGCAAAA
ATTCATAGAGGCTCTGAAAGGAAGTGCTGCTATTGGCCTTGATTTTTGGA
AATGGTTTGGTGAAACTTGGTGGACTTTGGACCATTGTTTGACTGGAGCA
CATGTCTATTTCAACGCTGTTAAACATTTCTCAATGGACTTTTTCCATGA
GGAGCCTGAAACCAAGTGTCAAATGCCATGCGCGCAAATCATGGGAAACC
CGCGGTTGACTTTGAACTCGACCGAttcgaaattttaa
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000011_pilon | genome | sc0000011_pilon:1508497..1513642 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 208-594:4760 |
| Aaloc | 1-207:1 |
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