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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000011_pilon:1504637..1507217+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_036034 ID=XLOC_036034|Name=XLOC_036034|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2581bp|location=Sequence derived from alignment at sc0000011_pilon:1504637..1507217+ (Clytia hemisphaerica_ch_hm2_pilon)
GACCCTCCACCAGCCACCGGTATCGAGGTCTTCAGTCACGGTACAGGTTT
AATCATTGCTACAATTGGACTGTTCGGAAACATCATAACAATCCTTGTTT
GGCGAGAGAAAATCAAATCCAAAGCTACAAAATCAAAAGCAACAATCATC
CTCTTAACAATCTTAGCAATTTGTGATTGTTTCTTACTCCTCGATTTTCT
GCTATACGACACTCTACCATCATTCCTACCTAATGTCAAAACATCTGGAC
ATACGCCTGGTGCTATGTTTGGATTTTGAATCCAGTATTCTACATCTCCT
GTGTGGCTAGCATCTGGATGATTTGCGTGATCACCCTAAACAGATTCATA
ATGGTTGCAATCCCAACGAAAGCTGCTTCTTTGTTTACATCAACACGTTC
CTGTATTACCTCATTCGGAATTATCATGTTTGCAATCGTTATGTCTTTAC
CAGaatttttcacctttcaaatcatCACAAACACCACCACCAATAACACA
ATCATCTTGGAAAGATCGTCATTTGGCCAATCACATGATGCTTTAGAATA
TGAATTTTGGCTACATTGCATGATTTTAGTGTTAGGGCCTTGGATCATGA
TTGCAATATTGAATATCTTGATCATCGTTTTATTGAGAAGACAATgggat
tttcgaaagaaattccAAGGTAACGTATATTTTAAAGCCCTCTCTACATG
TACGCAAAACatttgacactctctaattcgatcctcaaggataaaaattc
aattcccTTTGGCAATCGAATTGAAGAGCGTCGACTGTATATCAGGtagt
taaaaaaatgttttaataaagtttaaattttgaggCAGTATCCAGTAAGC
TATATTATCGATAAGTATCTGGCAGTACACCGATTTTCTATCGGCTTCAA
AATTTCGCACTTTCAAACTTGGGCCTATTTCGGAGcacccctcaaaattt
caaaattcaatttttctaatattttgaatatctttaaaaaaaaatgtatg
cCAAAATTTATTCGCTTGAATATTTGACACCTCAACTTTAATGTCTATTT
TGATTTGTTGCAGTGCAAAAGGTGAAGCATACACAAAATAAACAATACAG
ACAAGAGATCAGTTTGACAAAGACTTTGGTGGCAATCACCACTTTCTTCT
TGTTGGTTTTGATCTGGCAATGTATCACACAATGTTTCTGGATGAGAGGC
TATGGTAAGAAATGTgacacagacccactggaaaatttggcagaaatttt
gtccccggcaggaaaataccctagaattgcAGCCCTTTTAAGAAATTAAC
TTTTATCTTATCCCATATGAgatattcaatgtttaaaaattgcacttcaa
aaccatccccattgatttttttaaacttggaacaatagaatttatatccc
tattgggatttcaatgggaatttttatccccattgagaaaAAGGTTTCAC
CAGGGATGTGAGGCAGGGTTGTACAAAGTGTTGTTGCAAAGCCCATCTAA
CGTTATACACATTAGAAGTGACTATAAAACTCTTTCAATGTTATATAGAC
TCCCgggatactagggttgcgagctgacgggtatgtgccccCGGCACATA
GACCTTTGAGATTAGCACCCTTGCAGGGACTGCCAGGTTCCAAAAAGGCA
CATACTCGAACCCTTTGCCTTGGTACCTCCCCTGACAGAGACTTGAGGCG
GATTTTTTCAGTGTTACTCATGCCAGATAATTATCTTCTTGTATGGCTAA
TGAATAAAGGTACTCTTGACTAGACCCGAACAAAAACATAAGTCTAAATC
CCACCTCGATTTTCTTTGGTGCATACCTTGTTGTTGCTATGTATTTCCAA
GGTTTTTATCTGACGCCCAGTGTTTTTTGGGCAAGCAGTAGCCTACAATA
CtggcaaaaagtaatggaattTTCTTTTCCTGGTTAAAATTTGAAGCTTT
CCCCCCTTTCCCCTCCTTTTACAATGTTGAATTTCACAGTACAGACTGCA
AAATGACACTCAACATTGTagggagggggaggggagggaAATGGACAAGA
AAAAACCCTAGAATATGTAAAATTCCATTTACTTTTTGCCAGGATTGTAG
CTAAGAGGGGTGCAAAATtcgtgtaggagagcagatttttatgacactac
ACTACTGGGCAAGGGCGTTTGACGTCTGTGACACATGAGATGTTATTACA
GTAGGAGTCTCCATATCTCGAACCTCTATGACTATAAtgcctccataact
cgaaccatCTTAAAAGCCTCATAAACATGTCTCTATAAATCGAGCAaatg
tgcgtgttcgagttatagagactttaCTGTAGTAAGAtgtcttcaaaatt
tcatttttttatttttcaggtatTAAACATGATGTGAACACTTGGAATTA
CGTTCAAAAAGTATTTGCATTTGCCAAGCTTGGTGTCATCATAAATGCTG
CCACAAACTGGATATTCCTTTGTGGGACATGTTCAGTCTTCCGGAAAGAG
CTGCGAAAGTTCGTAGGTTGGAAGAGAAGGAGCATGAATAACAATTCAAA
TGTTTTAACTATTCAAGGGAGCACAGGCTAA Coding sequence (CDS) from alignment at sc0000011_pilon:1504637..1507217+ >XLOC_036034 ID=XLOC_036034|Name=XLOC_036034|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2044bp|location=Sequence derived from alignment at sc0000011_pilon:1504637..1507217+ (Clytia hemisphaerica_ch_hm2_pilon)
GACCCTCCACCAGCCACCGGTATCGAGGTCTTCAGTCACGGTACAGGTTT
AATCATTGCTACAATTGGACTGTTCGGAAACATCATAACAATCCTTGTTT
GGCGAGAGAAAATCAAATCCAAAGCTACAAAATCAAAAGCAACAATCATC
CTCTTAACAATCTTAGCAATTTGTGATTGTTTCTTACTCCTCGATTTTCT
GCTATACGACACTCTACCATCATTCCTACCTAATGTCAAAACATCTGGAC
ATACGCCTGGTGCTATGTTTGGATTTTGAATCCAGTATTCTACATCTCCT
GTGTGGCTAGCATCTGGATGATTTGCGTGATCACCCTAAACAGATTCATA
ATGGTTGCAATCCCAACGAAAGCTGCTTCTTTGTTTACATCAACACGTTC
CTGTATTACCTCATTCGGAATTATCATGTTTGCAATCGTTATGTCTTTAC
CAGaatttttcacctttcaaatcatCACAAACACCACCACCAATAACACA
ATCATCTTGGAAAGATCGTCATTTGGCCAATCACATGATGCTTTAGAATA
TGAATTTTGGCTACATTGCATGATTTTAGTGTTAGGGCCTTGGATCATGA
TTGCAATATTGAATATCTTGATCATCGTTTTATTGAGAAGACAATgggat
tttcgaaagaaattccAAGGACCCTCCACCAGCCACCGGTATCGAGGTCT
TCAGTCACGGTACAGGTTTAATCATTGCTACAATTGGACTGTTCGGAAAC
ATCATAACAATCCTTGTTTGGCGAGAGAAAATCAAATCCAAAGCTACAAA
ATCAAAAGCAACAATCATCCTCTTAACAATCTTAGCAATTTGTGATTGTT
TCTTACTCCTCGATTTTCTGCTATACGACACTCTACCATCATTCCTACCT
AATGTCAAAACATCTGGACATACGCCTGGTGCTATGTTTGGATTTTGAAT
CCAGTATTCTACATCTCCTGTGTGGCTAGCATCTGGATGATTTGCGTGAT
CACCCTAAACAGATTCATAATGGTTGCAATCCCAACGAAAGCTGCTTCTT
TGTTTACATCAACACGTTCCTGTATTACCTCATTCGGAATTATCATGTTT
GCAATCGTTATGTCTTTACCAGaatttttcacctttcaaatcatCACAAA
CACCACCACCAATAACACAATCATCTTGGAAAGATCGTCATTTGGCCAAT
CACATGATGCTTTAGAATATGAATTTTGGCTACATTGCATGATTTTAGTG
TTAGGGCCTTGGATCATGATTGCAATATTGAATATCTTGATCATCGTTTT
ATTGAGAAGACAATgggattttcgaaagaaattccAAGTGCAAAAGGTGA
AGCATACACAAAATAAACAATACAGACAAGAGATCAGTTTGACAAAGACT
TTGGTGGCAATCACCACTTTCTTCTTGTTGGTTTTGATCTGGCAATGTAT
CACACAATGTTTCTGGATGAGAGGCTATGTGCAAAAGGTGAAGCATACAC
AAAATAAACAATACAGACAAGAGATCAGTTTGACAAAGACTTTGGTGGCA
ATCACCACTTTCTTCTTGTTGGTTTTGATCTGGCAATGTATCACACAATG
TTTCTGGATGAGAGGCTATGgtatTAAACATGATGTGAACACTTGGAATT
ACGTTCAAAAAGTATTTGCATTTGCCAAGCTTGGTGTCATCATAAATGCT
GCCACAAACTGGATATTCCTTTGTGGGACATGTTCAGTCTTCCGGAAAGA
GCTGCGAAAGTTCGTAGGTTGGAAGAGAAGGAGCATGAATAACAATTCAA
ATGTTTTAACTATTCAAGGGAGCACAGGCTAAgtatTAAACATGATGTGA
ACACTTGGAATTACGTTCAAAAAGTATTTGCATTTGCCAAGCTTGGTGTC
ATCATAAATGCTGCCACAAACTGGATATTCCTTTGTGGGACATGTTCAGT
CTTCCGGAAAGAGCTGCGAAAGTTCGTAGGTTGGAAGAGAAGGAGCATGA
ATAACAATTCAAATGTTTTAACTATTCAAGGGAGCACAGGCTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000011_pilon | genome | sc0000011_pilon:1504637..1507217 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 817-1026:2372 |
| Aaloc | 676-813:1066 |
| Aaloc | 481-672:477 |
| Aaloc | 241-477:240 |
| Aaloc | 1-237:1 |
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