XLOC_036033 (mRNA) -

Overview
NameXLOC_036033
Unique NameXLOC_036033
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000011_pilon:1408763..1409779-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_036033 ID=XLOC_036033|Name=XLOC_036033|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1017bp|location=Sequence derived from alignment at sc0000011_pilon:1408763..1409779- (Clytia hemisphaerica_ch_hm2_pilon)
AGGCTTCCGTCAGTCCAGACATTGCAAACTGAATACTTGAAACTACCCCT CGATGAAACCGAAGATAGATACGAGCAATCAATACTCTTAACAAACGAAT CTCTTTTCTTTCTACTAATATCTTTCCAACAATCACAAAACACCAAAGAC AACAATTTATTACACCAGCAATTTGCTAAAAAAATGATAACCACAAAAAC CACATCACCAGACATAGAATTGCCAATGAAATATGGATTCTATGATGGTT TAATATCATTATTTACTCAAATAGAGGGTTTATGCGAAGACTCGATTCTC CAAATCTTAAATCAAATCATATATTGTTTGGCTGAGGACTCAATGGAAGA AGACCAACCTTACCAATACTTCAAATGGAATCTGATATCCTATCAAAGCC TATCACAGCTTGTTTCCTTACTGGTGAACATATTCAGTAAATTTCCAAGC TCTTTTTACAGCCGTATTGCAGAAAATGATTTACCGAGTTTAATGTTCGT TGTAAGTGCATTACTACAGATAAAAGATGACGAAAAAGTGAAATATTGTA GTGGGAATGGTCTCACGGACAATATAGATAGAGTGGACACACTTACTGAA AATGTGATTAAAATTCTATGTCTTCCGTTTGCGTTGGATCTTGATCAAAG TCTCTTGTATGAGATTCTATGTTCGTTATATCAAAGCTCAACTATAGGAT CGCTGTTTTTTTTGCTGTCTAAACCAAGTATGATTGACAACCAAGAGGAA ACTTCGATTGTTGTAGGTTTGATTGCCCGTTTGGTGTTAACAGACGAGAT GTTCATATCGCAACTGAAAAGTCTTTTAAACGGACCGGAAAATTTTGATA TGCTGTTCAAAGATTTGTTGTTCTCAAGCAGCGATAACGCTATACGGTGT GATGTTTTGGCTGTTATGAGTCATCTAGCGCGCCAGTCGGCTGATACTTC AAGAGTTGTTTCAAGAATCTTTGAGCAAGAAAACGGTAAGCTATTTACCA ACACCTGTTCTAATTGA

Coding sequence (CDS) from alignment at sc0000011_pilon:1408763..1409779-

>XLOC_036033 ID=XLOC_036033|Name=XLOC_036033|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2034bp|location=Sequence derived from alignment at sc0000011_pilon:1408763..1409779- (Clytia hemisphaerica_ch_hm2_pilon)
AGGCTTCCGTCAGTCCAGACATTGCAAACTGAATACTTGAAACTACCCCT
CGATGAAACCGAAGATAGATACGAGCAATCAATACTCTTAACAAACGAAT
CTCTTTTCTTTCTACTAATATCTTTCCAACAATCACAAAACACCAAAGAC
AACAATTTATTACACCAGCAATTTGCTAAAAAAATGATAACCACAAAAAC
CACATCACCAGACATAGAATTGCCAATGAAATATGGATTCTATGATGGTT
TAATATCATTATTTACTCAAATAGAGGGTTTATGCGAAGACTCGATTCTC
CAAATCTTAAATCAAATCATATATTGTTTGGCTGAGGACTCAATGGAAGA
AGACCAACCTTACCAATACTTCAAATGGAATCTGATATCCTATCAAAGCC
TATCACAGCTTGTTTCCTTACTGGTGAACATATTCAGTAAATTTCCAAGC
TCTTTTTACAGCCGTATTGCAGAAAATGATTTACCGAGTTTAATGTTCGT
TGTAAGTGCATTACTACAGATAAAAGATGACGAAAAAGTGAAATATTGTA
GTGGGAATGGTCTCACGGACAATATAGATAGAGTGGACACACTTACTGAA
AATGTGATTAAAATTCTATGTCTTCCGTTTGCGTTGGATCTTGATCAAAG
TCTCTTGTATGAGATTCTATGTTCGTTATATCAAAGCTCAACTATAGGAT
CGCTGTTTTTTTTGCTGTCTAAACCAAGTATGATTGACAACCAAGAGGAA
ACTTCGATTGTTGTAGGTTTGATTGCCCGTTTGGTGTTAACAGACGAGAT
GTTCATATCGCAACTGAAAAGTCTTTTAAACGGACCGGAAAATTTTGATA
TGCTGTTCAAAGATTTGTTGTTCTCAAGCAGCGATAACGCTATACGGTGT
GATGTTTTGGCTGTTATGAGTCATCTAGCGCGCCAGTCGGCTGATACTTC
AAGAGTTGTTTCAAGAATCTTTGAGCAAGAAAACGGTAAGCTATTTACCA
ACACCTGTTCTAATTGAAGGCTTCCGTCAGTCCAGACATTGCAAACTGAA
TACTTGAAACTACCCCTCGATGAAACCGAAGATAGATACGAGCAATCAAT
ACTCTTAACAAACGAATCTCTTTTCTTTCTACTAATATCTTTCCAACAAT
CACAAAACACCAAAGACAACAATTTATTACACCAGCAATTTGCTAAAAAA
ATGATAACCACAAAAACCACATCACCAGACATAGAATTGCCAATGAAATA
TGGATTCTATGATGGTTTAATATCATTATTTACTCAAATAGAGGGTTTAT
GCGAAGACTCGATTCTCCAAATCTTAAATCAAATCATATATTGTTTGGCT
GAGGACTCAATGGAAGAAGACCAACCTTACCAATACTTCAAATGGAATCT
GATATCCTATCAAAGCCTATCACAGCTTGTTTCCTTACTGGTGAACATAT
TCAGTAAATTTCCAAGCTCTTTTTACAGCCGTATTGCAGAAAATGATTTA
CCGAGTTTAATGTTCGTTGTAAGTGCATTACTACAGATAAAAGATGACGA
AAAAGTGAAATATTGTAGTGGGAATGGTCTCACGGACAATATAGATAGAG
TGGACACACTTACTGAAAATGTGATTAAAATTCTATGTCTTCCGTTTGCG
TTGGATCTTGATCAAAGTCTCTTGTATGAGATTCTATGTTCGTTATATCA
AAGCTCAACTATAGGATCGCTGTTTTTTTTGCTGTCTAAACCAAGTATGA
TTGACAACCAAGAGGAAACTTCGATTGTTGTAGGTTTGATTGCCCGTTTG
GTGTTAACAGACGAGATGTTCATATCGCAACTGAAAAGTCTTTTAAACGG
ACCGGAAAATTTTGATATGCTGTTCAAAGATTTGTTGTTCTCAAGCAGCG
ATAACGCTATACGGTGTGATGTTTTGGCTGTTATGAGTCATCTAGCGCGC
CAGTCGGCTGATACTTCAAGAGTTGTTTCAAGAATCTTTGAGCAAGAAAA
CGGTAAGCTATTTACCAACACCTGTTCTAATTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_036033XLOC_036033-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000011_pilongenomesc0000011_pilon:1408763..1409779 -
Properties
Property NameValue
Aaloc1-1017:1018