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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000011_pilon:1327226..1332730+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_036032 ID=XLOC_036032|Name=XLOC_036032|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5505bp|location=Sequence derived from alignment at sc0000011_pilon:1327226..1332730+ (Clytia hemisphaerica_ch_hm2_pilon)
TTTCAAAAACTCTACCTGGCAACCCAAGAAAGGTAATTTCAACGCAGCAC
TCTTTATTAAGAGTTCTTAGCTGTTCTTAATCTTCATATCATCTCTACTA
TCATGCGAATACATGATCACATGATCACTCACTCTCCCACTCGCAGTGTA
CTTTTTATTCTTAATGTactttttgactcatattgaaaATCTATTTAACT
AAAGTATTTTCTTCTATACTTCTGAAGTGACTCagtgattttttttgaca
atcTTTATCACGATGTGCGTGCCTTTAATCACCCCTTAAACTTTTTCTAG
TCTTCTTGTAATCTAGAATgccatttgaaaaaaagtagaGCAAAGACTAA
TGGATATTATTTTGCAAGCTAACAGTTTTTGCATTATCATATAACAACCG
CTTATTTTCCGGACACACTGTTTGCTGTGTTAGAGAGAAAGCCGTTGCAG
ccctttttattttcatctttcagTCCATCTGTTTTGAAATCTCCTGTGAA
GTCATCTAACAAGGTaataacacacccctgtctcataacCCCGGCCTGGC
TCACGGACCCGCAGGTGGAACTCTTTTTACACAGTGGTGATTAAAACTTC
TatcgaaattccaatggggatagaaattctattgttctaatcCAGTGGGG
GTGGTTTTgcagtgcaattttttacattgaatttctaatgaaaatgaaac
tctttcactgaagattgccatcctgaatggcatgaaactttgagtatgaa
attaacttgaatcgtttctttactcaaactcaTGAAAAggaaagtcaatt
tcccagtgggactgaaattgtaaggtatttttcccatcgggacgaaattt
tgtccaaatttccAGAGGACTGGGATCTCAGCTGGTCTGTGGCACAGAGG
TGTAATAAAACATCACCGCCCCCGGTGTGCCTTAGTCCTACAGACTAACC
CTTAGTCCTACAAACTAAGAACTCTCGAAAACTCCTGGTTTCATTGGCGC
TTAAAAAACTTGGAATCGTCCTTGATTTCTTAAGACAGATTcgattttct
gctttttcattCCTCTATTATGAAAGTCTCCAATTTTGAGCGGTACAGTA
ATACAATATATCGATTTTAAACCTTTTCTGAATCAACAATTTCTAACGAC
CTTATACCAACTCTCAAAAGCGAACGCCCATCATCTAAATTAAATATCGt
ccttattttattttaattttcagcaAATGTTGGATTTACTTTGTGAGATC
CaaacacattttttggaatattgTCAAAACACAAATCCTATGTATACCGT
GAGTCGTAAAGTTCTATTTACGCTCTTAAATTCGTATTTCAAAGGgtaat
tggattttcatcgaaagGGAACGTATCggatagtagagcgtcgtttatga
gagtttcttgttgacgttGGCTTTCAATaatatcgaataatggagcgtat
tgaatattagaacgtcgaattagagggTATTATCCCTGTTAAGCACCAAC
AGGGAAAATCACAATCGTATTCCCAtgtaaatatttgaaaccattaccaa
gatCTGCCGCTCAAGAGACCCTACTATTGCAAGCTCCCTTGAAGGGGAAA
ACTTAATCGGGAAAACTTTTCGTTGGaaaaaaaaCCTTGTGTACAAATGC
TGTACTATTTTTTCTTTGGCAGGTTCTTTTACTACCAACACTGTTCCAGG
CAATTCACCTGTCAATGGCCGATTCCATCAACACTCACCTCATGTTAAAT
TGGTAAGTGACTATCCTTTCTTTTACCTTGTCGGGGGAAAGTaacgaaat
tttccccgacattttatcactcgaccaaaacttttaaccaatttttttaT
CCCCCACTAAAATTGAAATCCAtttttttACGCCTTTATTAACTGAAATT
AGTTTAATtactttaaacgtcgaattacgaaatctattttcgagctagtT
AAAGagaccatttcatttggacaatttagtcggtTGGAAATAgctaattt
tcaaatttggtcggggaaaagtgacgaaaatgcctctaggtgacaaGTTT
TCCCCGACTAATTAAAACCgcgacattttttccccaataagATAGTCCTT
TCTTAACGCTCCTGTgactttttaatcaaattagcTTTTGTTTCAAAATC
CTAGCTCGGAAGAataaatatcaagtaaacaaaacGGCTGCTGTCGCTTG
GCAACTAAATCTGCTCTTTAAAACAAATCTTCTTTCAAACCTGATGTGTT
CCTTCAGAAAAAAGTTGGGAAATTTCCTacctttttttgttaaaaactac
AATTTTCGTTGTGAAAAAGGAGCTGGCGTTCAAATTTGTGATCATACGCC
CGTTTTAGACCGATAACTGTATGTCTTAATTCCTCCTAGACTGCTggtat
ccactaacggattcgtgctccttatactacccgcggttttgtagaggtct
gcgattcagactaaattCCTGTCTGAACCGTATATAATATGAAAATACTC
AATGCAACTGAATGCAACTTGCGATTTGCGgtatgcgattcagactaaat
tCCTGTCTGAACCGTATATAGGATGAAAATACTTCGTgtaacttttcttt
tctttttttatttcagcgTCGATACCATTCTTCAGAAATTGAAAACCAGT
GAAACAGCGTAAGTATGATGTACATTCATACATTCTTATATTCTTGCGTG
TATATGTAGttggcgttctctaattcgattttcaaggggaatctaatttt
catcgaataaaggagcgtcgtttataagagtttcttgttgacagggACTC
CCAATATTATTGAATTATAGAGCGTAtagaatagtagaacgtcgaaatAG
AGAGCGCCAACTGTATCATTTCTGCTTAGCTTCCATCCCATATTTGACTA
TTTCTTACCAAACAGGTCGACTAATAAAAATCATACAGAGTCTATCTGGC
TATGCTTTTTAACCTTGATGGACACTCTATGACTTTATACTCTGTACTAA
TTAAAAGCACtcctcatggttgattgaaattcgattgacgtttttgctta
cgttgaTTTGttatttcccgcaaaagtgaaatttccatcgttttgaaatt
catcaccttttttcaaatttcttactaacttcgaaGGCTTACGTAACAAA
AATCACTCCTTTTTGCCTTGGATACCATCAGTAGTAGAAACCTAAGAGTA
TCGCAACCAATGGATGCACCATTTGATAGCACCCATAGAGACGGTTCAAT
CGGACATGGACTTCTCCAATTGAATAGATGACGTTTTCCCTTGAGGCTAA
CGAAAATTGTATTTTGtatctttattttcttctaCATATTTACTCTTTTA
CTTTCAGTAGTAACCAGAATGTGTTGAGGATCGCAAGTACAGAATTATGT
AGTGTCTTTGAAAAAgatgtaagaaatatttttcaatgtttacGCCATGA
GGCGTGAGCTGCTCTCATGTACCATTGATCTTTGTTAAATCCTGGAGTGT
CTCAAGTTCGACTAAAatatttgatcggagtttttgtaaaatttggtatc
cTGATGAAAGCAATGCTCAATGTCGGGACTACCtttttattgccgaccca
agAAAATATCagtgttttgattggtcaatattttactcgttccgagattt
taccgataatacggaaaaatctcggaactcgtaaaatatttctagtATTG
CACTCGGAGTCATGCGATAATTATTACTTATAGCTACATGGTATTTAAAT
ACTGGACCTCCGTCGAGCGGGGACCACTTTctaaaaactctgatcaaaga
tagAGGGGTTTATTAAATATTGGTCAATAGAATTTGTTCATCAACGACGT
TTCACTAATTTTGACGACAATGCATATTTTCAGCGAATTCTTAAATTCTA
AGGTTTTTCGTGTTTGAGGGAATTCAGTATTGTGTGTGAAAATAACGACA
ACCGTAAAATACTAAATTCCGCGAAAGCTTTGAAAACTACTTATCTCTTC
TTTCAACTCAACTTCAGGATACAGAAGCAGCTTCTTTACAGCAAGTTGTC
AACATCGTGCTGTTGCTACGTGACGTCATGAAATCATCCTTTCCCTTGGA
TACCATCAAAAACAGCTTGCGGAAGCGCTTACAAAGAGCGGAGAATGATG
TGAAGTCTAAAACAGCATTTGCAGATGCGAACACACCTCGACCAATGAGC
AATAGAAAGGATAAAggtatttttgtttgtttgtttgttgtcaATCATCA
TTCGTCACAGAGAGTCATActgggtgcgccacaaaaaaaagtttctctct
ttgaaaccaattttctcgaaatctagaaattttatttttaaaagaaccat
tcctattttattgggaagaaaataaacttaatgatgggtcatttattaaa
ttcgtttcgttagatcaaaagttctgctcgattgaataaaaaagttactt
tcagaaagtgctcgaaaaagttgaaaaacttttttttggcgcacccggta
tgatGTACTTTTCAACCAATGAGGTTTCATCATTTCGAGGGGCATACAAA
CAAAACTCAATGAAggtttttgtgtaaaaacatACTATTGGTAAAAATTA
CTATTTCTGTTTTTATCCGCTCCTGACCACTTCATGAAATGGTGAAGAAT
GCACTCACTGATTTATTCGGAGAAAAAAGGGAGTGATGGAAAAACAAATA
AGCTCGGTTACTGAAAATTTAGAGCAGTCTGTAGTTGTTAAAAAcgacaa
ttttttttggacctgaaaattattttttcaccaagaTGACAATCGGGTCT
CGAATTAGttggagaaaaataatttaatcagAATAAATTTACTACCGAAA
ATTACAAATCTACTAAGTTGCCTTTGTGTAAGAGTTTTGAAATAGCCATA
CTTTCCGAttttttttGTGGATATCTGCTCATTTGAATGACATTTAAACA
ACTTAAgggttcaaataaaaaacattttttccttctttttgtcAGGATCG
TTAAGTGATGACCGATTATCATTTTCAACGGCTAGTTTCGATTCTGCGCG
TTGCATGACGGAAGATTCCGAGTCCTCTGAGAGTGAGGACGAAAAAGAGA
AGGCTGGGAATGAAGTTGATATGGATGAATTATCTTCAGATTGGGATTGG
AGCAGCGGAGATGAAGATGAAAGGGTAAGACCTAATTAGTACCCAAACCT
CAAATTTCTATTGCTTCGCTATCTTAAGTTTTATTATTCTACAGCAGTAA
TCAATCGCCAATATATTGTTGCTCAATGACAGcaaggaactttaataaaa
caTTTGAAAGTTTCTTGATGAAAGTGATCAATCGTAggaaaatcaataaa
taaactTTTGGCTATTTAAGTTGataataattcaattttttattttctag
gaTGAATCCATTGTATTGGACATTCTTGGCAACTTGCAAGAAATCCTGAA
TCGAACACAGCCCTCACCTTCTAATCCTCCTGAAATTGTTTTGACCGAAC
ATTGA Coding sequence (CDS) from alignment at sc0000011_pilon:1327226..1332730+ >XLOC_036032 ID=XLOC_036032|Name=XLOC_036032|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1626bp|location=Sequence derived from alignment at sc0000011_pilon:1327226..1332730+ (Clytia hemisphaerica_ch_hm2_pilon)
TTTCAAAAACTCTACCTGGCAACCCAAGAAAGTTTCAAAAACTCTACCTG
GCAACCCAAGAAAGTCCATCTGTTTTGAAATCTCCTGTGAAGTCATCTAA
CAAGTCCATCTGTTTTGAAATCTCCTGTGAAGTCATCTAACAAGcaAATG
TTGGATTTACTTTGTGAGATCCaaacacattttttggaatattgTCAAAA
CACAAATCCTATGTATACCcaAATGTTGGATTTACTTTGTGAGATCCaaa
cacattttttggaatattgTCAAAACACAAATCCTATGTATACCGTTCTT
TTACTACCAACACTGTTCCAGGCAATTCACCTGTCAATGGCCGATTCCAT
CAACACTCACCTCATGTTAAATTGGTTCTTTTACTACCAACACTGTTCCA
GGCAATTCACCTGTCAATGGCCGATTCCATCAACACTCACCTCATGTTAA
ATTGcgTCGATACCATTCTTCAGAAATTGAAAACCAGTGAAACAGCcgTC
GATACCATTCTTCAGAAATTGAAAACCAGTGAAACAGCTAGTAACCAGAA
TGTGTTGAGGATCGCAAGTACAGAATTATGTAGTGTCTTTGAAAAAgatT
AGTAACCAGAATGTGTTGAGGATCGCAAGTACAGAATTATGTAGTGTCTT
TGAAAAAgatGATACAGAAGCAGCTTCTTTACAGCAAGTTGTCAACATCG
TGCTGTTGCTACGTGACGTCATGAAATCATCCTTTCCCTTGGATACCATC
AAAAACAGCTTGCGGAAGCGCTTACAAAGAGCGGAGAATGATGTGAAGTC
TAAAACAGCATTTGCAGATGCGAACACACCTCGACCAATGAGCAATAGAA
AGGATAAAgGATACAGAAGCAGCTTCTTTACAGCAAGTTGTCAACATCGT
GCTGTTGCTACGTGACGTCATGAAATCATCCTTTCCCTTGGATACCATCA
AAAACAGCTTGCGGAAGCGCTTACAAAGAGCGGAGAATGATGTGAAGTCT
AAAACAGCATTTGCAGATGCGAACACACCTCGACCAATGAGCAATAGAAA
GGATAAAgGATCGTTAAGTGATGACCGATTATCATTTTCAACGGCTAGTT
TCGATTCTGCGCGTTGCATGACGGAAGATTCCGAGTCCTCTGAGAGTGAG
GACGAAAAAGAGAAGGCTGGGAATGAAGTTGATATGGATGAATTATCTTC
AGATTGGGATTGGAGCAGCGGAGATGAAGATGAAAGGGATCGTTAAGTGA
TGACCGATTATCATTTTCAACGGCTAGTTTCGATTCTGCGCGTTGCATGA
CGGAAGATTCCGAGTCCTCTGAGAGTGAGGACGAAAAAGAGAAGGCTGGG
AATGAAGTTGATATGGATGAATTATCTTCAGATTGGGATTGGAGCAGCGG
AGATGAAGATGAAAGGgaTGAATCCATTGTATTGGACATTCTTGGCAACT
TGCAAGAAATCCTGAATCGAACACAGCCCTCACCTTCTAATCCTCCTGAA
ATTGTTTTGACCGAACATTGAgaTGAATCCATTGTATTGGACATTCTTGG
CAACTTGCAAGAAATCCTGAATCGAACACAGCCCTCACCTTCTAATCCTC
CTGAAATTGTTTTGACCGAACATTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000011_pilon | genome | sc0000011_pilon:1327226..1332730 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 709-813:5401 |
| Aaloc | 532-708:4998 |
| Aaloc | 331-528:4018 |
| Aaloc | 271-330:3359 |
| Aaloc | 229-267:2618 |
| Aaloc | 148-225:1673 |
| Aaloc | 73-147:1224 |
| Aaloc | 34-72:475 |
| Aaloc | 1-30:1 |
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