XLOC_036001 (mRNA) -

Overview
NameXLOC_036001
Unique NameXLOC_036001
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000140_pilon:381095..381724+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_036001 ID=XLOC_036001|Name=XLOC_036001|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=630bp|location=Sequence derived from alignment at sc0000140_pilon:381095..381724+ (Clytia hemisphaerica_ch_hm2_pilon)
GTCGAAAACATCGAGAACCCTTGTATAAAACTCCCAAAGCAAATTATTGG AGCTCAAACCATCAATGAAACTGTAACAGGGGCTTCTTGTATTAAACTCC CAAAGcaaattgatgaaaatctaGCCAAAAGTGATAACTTTGAGAAATCT TGTACAAGACTTCCAAAGCAAGATATTGAAACCGAGGTCAACAATGAAAC TGTTGCTCAAAGTGACGACACTGATGCTTGCTGTCTAAATCTTTCAACTC AGATTAAAGAAATTGAAGTCAAAGTTAAAACTCGTATGAATGGCACTGAG AAATCATTCGTAAAACTCCaaaagcaaaatattgaaaatggcATCGAGGC TAAAACTCGTATGAATGATAGCACTTGTATAAGACTTCCAAAGCAAAATA TTGGAACTGGAATCACCAATGAAAATATAGATGATACTACTCAGACCTCT CGTATAACATTTCCAAAGCAAATTAATAAAACAAAAGTCAAAGATGTCAC CTGTGAAGAGAATGATGGCACTGAGACATGCTGTAAACTTCCAACGCAAG ATGACCAACGCGGAGATGAGCGAACAAGAAAACtcgataaaaaaataaat aaagaagaCATAATCGATGATCAGGGTTag

Coding sequence (CDS) from alignment at sc0000140_pilon:381095..381724+

>XLOC_036001 ID=XLOC_036001|Name=XLOC_036001|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1260bp|location=Sequence derived from alignment at sc0000140_pilon:381095..381724+ (Clytia hemisphaerica_ch_hm2_pilon)
GTCGAAAACATCGAGAACCCTTGTATAAAACTCCCAAAGCAAATTATTGG
AGCTCAAACCATCAATGAAACTGTAACAGGGGCTTCTTGTATTAAACTCC
CAAAGcaaattgatgaaaatctaGCCAAAAGTGATAACTTTGAGAAATCT
TGTACAAGACTTCCAAAGCAAGATATTGAAACCGAGGTCAACAATGAAAC
TGTTGCTCAAAGTGACGACACTGATGCTTGCTGTCTAAATCTTTCAACTC
AGATTAAAGAAATTGAAGTCAAAGTTAAAACTCGTATGAATGGCACTGAG
AAATCATTCGTAAAACTCCaaaagcaaaatattgaaaatggcATCGAGGC
TAAAACTCGTATGAATGATAGCACTTGTATAAGACTTCCAAAGCAAAATA
TTGGAACTGGAATCACCAATGAAAATATAGATGATACTACTCAGACCTCT
CGTATAACATTTCCAAAGCAAATTAATAAAACAAAAGTCAAAGATGTCAC
CTGTGAAGAGAATGATGGCACTGAGACATGCTGTAAACTTCCAACGCAAG
ATGACCAACGCGGAGATGAGCGAACAAGAAAACtcgataaaaaaataaat
aaagaagaCATAATCGATGATCAGGGTTagGTCGAAAACATCGAGAACCC
TTGTATAAAACTCCCAAAGCAAATTATTGGAGCTCAAACCATCAATGAAA
CTGTAACAGGGGCTTCTTGTATTAAACTCCCAAAGcaaattgatgaaaat
ctaGCCAAAAGTGATAACTTTGAGAAATCTTGTACAAGACTTCCAAAGCA
AGATATTGAAACCGAGGTCAACAATGAAACTGTTGCTCAAAGTGACGACA
CTGATGCTTGCTGTCTAAATCTTTCAACTCAGATTAAAGAAATTGAAGTC
AAAGTTAAAACTCGTATGAATGGCACTGAGAAATCATTCGTAAAACTCCa
aaagcaaaatattgaaaatggcATCGAGGCTAAAACTCGTATGAATGATA
GCACTTGTATAAGACTTCCAAAGCAAAATATTGGAACTGGAATCACCAAT
GAAAATATAGATGATACTACTCAGACCTCTCGTATAACATTTCCAAAGCA
AATTAATAAAACAAAAGTCAAAGATGTCACCTGTGAAGAGAATGATGGCA
CTGAGACATGCTGTAAACTTCCAACGCAAGATGACCAACGCGGAGATGAG
CGAACAAGAAAACtcgataaaaaaataaataaagaagaCATAATCGATGA
TCAGGGTTag
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_036001XLOC_036001-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000140_pilongenomesc0000140_pilon:381095..381724 +
Properties
Property NameValue
Aaloc601-633:598
Aaloc439-597:439
Aaloc295-438:292
Aaloc1-291:1