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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000071_pilon:1289246..1294562- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_035988 ID=XLOC_035988|Name=XLOC_035988|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5317bp|location=Sequence derived from alignment at sc0000071_pilon:1289246..1294562- (Clytia hemisphaerica_ch_hm2_pilon)
GTTGCAAAACCATCAACACCAGCTCCTCAACAACCACAACAACCCAAACC
AAATGGTTTAAACAACCAATTCGATGGCCAAATGTTATGTACCCACAGTC
CTATCTCTTATAACGTGACTTTGAAAGGTGGAACGGAGAGTGGTAATTTT
ACAGACCTTGGTGGTGTAGACGATATGGATTTATGTATCTCATTATGTTG
CGAGATCGCGTAAGTAATTTCTCAATAGTTTTTTCAACGTCCATGTAACG
TTAGATTAACGTTCAGTTAACGCTATGTGCCAATCGTTTAGATTTATTTT
AAAAGATGTTTTTTACCATTGGTTGGATGGTAGTCTAGAGCTAGACTACT
AGTTAACATCAGTTTTAGTAAAAAACTTCTTTTACAGTAGTAGAAAAAAC
TTACCTAGAAGTTTGTTTACTTTTCGATTGTTTGAATTAGTATACCAACT
TCCCGTACGGCTTTTTTCTTTTTTTTTGACTTTGAGGCAGGATTGCTCCT
ACGTTTTGTGTTAAAAGAATAGTGGTCTGGAAATCGAGACTAGTTGGATA
GTTAAAGAGTTATTAATTCAGCATGACTTTTTAACAACTAGTGGGAACTT
ATTGCTTAGAAAATCTTTCCCGAATATTTTCAGTTTGAAGTATTTCAGCA
CCGAAATTTTGTGATTTTTGAGACCCTCGGAACCCCTAGATTTTTGTAGA
ACTTTTAAGTTTTCATATATTCAGAGCCTCGTTGTTCTAGGCTCTCCCGG
GATATTCAAAACTTACTCTATTAATAGGTCCTGCCAATTGGCTTTTATGA
TTGGTAAACGTTGTTTAGCAGTGCAATGCTATACGGAGGAGCTGTGTCAA
ACCATCAAAGCTAAACCAAATAACCGGATGCCGAAAATTGCTTACATCAG
AAGGAAAGAAAATCATCAGAAAACTAGAGGTAAGAATTATTTATTTCAAT
TTAAGATTTTTCACTGCAAGAACAAGACGAATACTAGTTGGGCTATATTT
TTTGACTTTAATCAATATTTTGGGAAGGTTACTTGAGATAAAATACAGCC
ACAGAAATCTTAAATTGTTTGACGATACACCTAGAAGAATTTAGAATAAT
TCAAAATGCACATTTTTTTCTAGACAAACTTTCTCGCCCATTACCTCAAC
CATCTGGCAACCGCCAAGTAATTAACGCCAATCACATTCCAGAAAAATTG
GCGCCCGTCTTACGCCCTAGCACATGTCAAGCTAGAAAGATCTACAACAA
CGTCACCTTGCTTGGTGGAATGCGTGCTGGAAACTATACCGCCCTAGGGC
GTGCTACACATTTAGAAGATTGTATAGGGCGTGCTTGTGATCTAAATGAA
GGTCATCTAGCTTTGATGCTTGGGCGGTATTGTTACTCTGTCACGTGTAA
TAACCAGAGAACTTGCCAAACCATCCCAGCTAAACCAAGTCATCTGAGAC
CAAAAGTGGCTTATCTTGCCTGGACTCAAGACCCGATTGAACAAGATACA
AGTAAGCTATGAGATATATTTCTGTTCAAGTTTTTGTTTTAGATGCCGTG
CTCGGAATTTAAACGCAGGGAAAAACTGCCTTGCTCTCTGATTTTCTTGT
AGAAAAGTGCCGTAGCGCGACGGGTGACAGATATTCGCCCGTCGAATGAA
GATGTGCAGTGATAAACAATATCGCCGATAATGGAGTAAATATAAAAATA
TAGATATAAAAATAAACGACTCTCACTTAAATTTGGCTTCCTGTTCCAAG
TAAACAAAAACCTCTGAAAATAAGGTTCCTTCCGATTTGGAAAGTTGTAT
CGCTCAATTTACAACTCAATTTTACGTCTTCGAAAGTGCTTCGCAGTAAG
GTCAGTATAATACAATATTCAAGGTTTGCATCTTTTTATTTTCACATTTA
CAGTAACAAATATGGCAGAGAGTGATTTCTTCGTCAATCATAAAAGATAT
CCACGGTGTAAACGGAGCCATATCATGTACAATCACACATTGAGAGGGGG
CCTTAGAGCTGGTAATTTCTCAATGCTTGCAACTGTAGATGATATTGAAG
TTTGTGCTGCTCTATGCTGCGAAGAAAAATATTGCGATTTGGGTAAGTTA
GAAAAACTTATCGATTTCTGTAAATTCTGACTAGATATATATATTTATAA
GTATCTTGAGTACCTCACAAGAAAGCATATATGGCCCCCCCAGCGTTTTG
CATGAATGCGTGAATGGGCATTTTCGGTTGCGTGAATGCGTTAAAATTGA
AAAAAAATAAAATGTGTGAATGCATGAATTGAAAAAACTTCCTTTTTGAT
TGCGTGAATGCGTGAATCTGGGCTACTTGTGTGTGAATACGTGAGTTTTG
CCTTTTTTACACCGATTGTGTGCAGTGTTCCCGATTTTCCAATGTTTCCC
CGACTTTTCCCAAAAATTTTTCTGAAAAATTGGGTTATTGCGTGAAACTC
GAGAAATATTTGCGTGAATGCGTAAATTTCGAAAAAAAAATTGATGATTG
CGTGATTGCGTGATTGCGTGAATATCTTTTGTTATTTTTCTGTGCAATAA
AAGACATGGACTACCCTGAGTATCAGAGGTTAAGTTTTCAAAGAAAATAG
TAACCTCTGAAGACAAATAATAGAAATTTCATCGCGCATGTGTCAATCTA
ATCACTGTAGAAAAAATCAAAGATGAAGAGCAAATATTACCATATTAATG
TCTAGCAGACTGTATCAGTATGCAGTTTACTATTTACGAATTCCCCAGAA
ACCTCCAAGTGTAGTTGAAATGAGTTTATTTCAAAAGAAATCTTTTACAT
GATCCCCAAATGTATAACAGTAATTACTAAACTTTTAATTATGGAAATGT
CACTTTAATTGAATCGAAATAATAGACAGACTTTATGTTATGATTCTCTA
TCACTGACTCTTTTTACAAAGCATTGATGACTTTTTGTAAGTTGTGTTTT
CAACGACGGGAATAAAAATATCGACTATGACGCTCATCCAAGATCTTGGA
TGGTCGTCATAGTTACTTTTGTCTTCGCTGATTGCGCGATGAATAGAATC
TCGATTCGTCGGCACCAGGGTCGGATACAGGAGGTAGGCTATCTTATTCA
TGGAGAGTAATTAGTTTCCATATAAAGTAATACGATAATAAAGTGCACTC
TCCTCCATTGGTTATAGCCTCCCTCTGTATCCGAGCCTGGGCACGGCGTA
AATATATGATTTTGAGCTGTGCTTTTCACGGTAGACATGGACCTCTGGTA
AAACAAGGCAATATTTTAATATGATATCTATACATGGCTTTCTTAAAGCT
TGATTTAAAACGTAATGATTATGTACTTAGTTGCGGGGCTTGGTACCGGA
GAAGCTGTTCCTTTTGATTACTGCGTTCATCTTTTCTATCTTAATCGGAA
CTCAAAAGTTTATGTTTCTTTTACGCTCTTACATATTTGCATATTTATTT
TGCAGCCCTAATGATTGGTGATAACTGTTATGCTGGAGATTGCACCAGTC
CAGAACTATGTTCCGCTGTGCCTGTACCACCTGATTCATTACAACGATCA
CAAATCGCCTACATTACAGCACCTGGCAGAACTAAAGCTGAAGACAAAAC
AGCTAACTCAGGTACTATAATATTTAGTTACCGTATTATAAGGGGTGAAA
ATGGTAGTTTTTTGTTGTTTGGGATTTGTGTTTTTGGTCCAAAATAAAAA
CGATTCAATAATATATGGATTTAGCACGTGCTAAGGCAAAGCTAAAATGT
GAAGTCTGCCATGTTACACCTGAGAACTTATCAGCGCCATACAGTCTATC
AAAAAAACGATAGGCAGTTTTAGACCATGTCAAACTTATCAGAGGAAGAG
ATTTTTAATTGTAATTTCATTGTCTTTTAACGAGCGTTTTACTCCTTCCC
ATGTTTCCGACGTACTTGCTGTATTGTCTTAAATCCGCCAGTGCTCACCA
CTTGCACAACACAGATTTTACTCAAGCAGCCCTTATGTGTTTTAAATCAT
TAATCTTTGTAGATTGGAGTTATATCTATCTGGTTGTCAGTGCTTTGGTT
ATTGGAATAAGTACCCTGGGTACGGCATGGACAATATGCTTATGTGCCTT
GAAGTGAGTACACTCTTGTTTCAATTCTTTTTCTTGGTACTCTTTGATGA
AGTTTTATAAATTAGAATATAGAATCTGTACGGTGTCATACATTTAAAAT
AAACAGAGGAACTTTTTTTCAAATACTTTGCTTTTTCAAGCATGCATCCT
CAAACGATTTTAAGAAATAAAAACGACAATTGTAATGCCAGTTTCAAATA
CAACGCGTTGCTTTTAATTGATGAAAAACCAGTTAATAGTGGGACGCTGC
TCTGCGGTATTGAGCACTCTGTGGATTGTAAAGTCAGTTGTACTATCAAT
AATCAATAACCCATCACTATCGTGAACAGATCGAATGCCCTCAACGAACA
GTTAGATTAGAAGGGTTTATAGAGGTTGGATATGTATCATCTAGAAAATT
TGTGTGTCAGATTTATATCATCTTTTATTTTTAACCAATAGGAGACATCG
AAGACACATGGATAAACTGAGAAGCATGTCACTTGCAGAAAGTTTACAGC
AATCCAAACCATTATTAGAAACATCCATGAAAGGTACTACAAGAGATTGG
GATCAAGGTTCTTTATTTCATGGGGATAAATTTTTGTGGTCCTGGTACTG
AGATTCATGATGAATTTAAACCCCCGGGGGTATTACCCTTGCTGACCGAC
GGGGGTGCTCCGCTGAGGTTCGAAAAAGTGCCATGACCCGGAATGGGACT
GAAATTCCAAAATTTTCTCAGATTTTCTACTTTTTCCCCAAATTTTCCAA
CAAAGGCACCCTACGAGGGACTGATTTTCTTATTTTTGTGTTTTTGCAAC
CCTACCTGGGACTCGTAGAGGTTAAAAAAGGTACCCTGTCCAGCGGCGCA
TCCCCGTAACCCATTTTGCCCTAGTACCCCCCACCGGGATTTAAACCTTA
GAAAAATCACAGATAGACACTGTTTGTGGTTCCCTGTACAAAATGTCTTT
GAAAGATTTTAATGCGGATGGCATGTATAACAGTTGTTATCGATTATTTC
TGAGTCATAATTTTGAGTCATAATTTCAACATAAAAAAGGGGCCACTGAG
TAAAAGATAAAAAGTAAAACCGAAAGAAATATTTTCTTTCAGGTAACTAC
TTATTCGGAGGTAATATTGGTCCAGTTGGGACATCAAGCCGAAATGATTC
AAATATAAACACTTCTAATATTTCTGATGTGGATGAACAAGACAATAACA
AAAATGGCGCAACTTGA Coding sequence (CDS) from alignment at sc0000071_pilon:1289246..1294562- >XLOC_035988 ID=XLOC_035988|Name=XLOC_035988|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2784bp|location=Sequence derived from alignment at sc0000071_pilon:1289246..1294562- (Clytia hemisphaerica_ch_hm2_pilon)
GTTGCAAAACCATCAACACCAGCTCCTCAACAACCACAACAACCCAAACC
AAATGGTTTAAACAACCAATTCGATGGCCAAATGTTATGTACCCACAGTC
CTATCTCTTATAACGTGACTTTGAAAGGTGGAACGGAGAGTGGTAATTTT
ACAGACCTTGGTGGTGTAGACGATATGGATTTATGTATCTCATTATGTTG
CGAGATCGCGTTGCAAAACCATCAACACCAGCTCCTCAACAACCACAACA
ACCCAAACCAAATGGTTTAAACAACCAATTCGATGGCCAAATGTTATGTA
CCCACAGTCCTATCTCTTATAACGTGACTTTGAAAGGTGGAACGGAGAGT
GGTAATTTTACAGACCTTGGTGGTGTAGACGATATGGATTTATGTATCTC
ATTATGTTGCGAGATCGCGTCCTGCCAATTGGCTTTTATGATTGGTAAAC
GTTGTTTAGCAGTGCAATGCTATACGGAGGAGCTGTGTCAAACCATCAAA
GCTAAACCAAATAACCGGATGCCGAAAATTGCTTACATCAGAAGGAAAGA
AAATCATCAGAAAACTAGAGGTCCTGCCAATTGGCTTTTATGATTGGTAA
ACGTTGTTTAGCAGTGCAATGCTATACGGAGGAGCTGTGTCAAACCATCA
AAGCTAAACCAAATAACCGGATGCCGAAAATTGCTTACATCAGAAGGAAA
GAAAATCATCAGAAAACTAGAGACAAACTTTCTCGCCCATTACCTCAACC
ATCTGGCAACCGCCAAGTAATTAACGCCAATCACATTCCAGAAAAATTGG
CGCCCGTCTTACGCCCTAGCACATGTCAAGCTAGAAAGATCTACAACAAC
GTCACCTTGCTTGGTGGAATGCGTGCTGGAAACTATACCGCCCTAGGGCG
TGCTACACATTTAGAAGATTGTATAGGGCGTGCTTGTGATCTAAATGAAG
GTCATCTAGCTTTGATGCTTGGGCGGTATTGTTACTCTGTCACGTGTAAT
AACCAGAGAACTTGCCAAACCATCCCAGCTAAACCAAGTCATCTGAGACC
AAAAGTGGCTTATCTTGCCTGGACTCAAGACCCGATTGAACAAGATACAA
ACAAACTTTCTCGCCCATTACCTCAACCATCTGGCAACCGCCAAGTAATT
AACGCCAATCACATTCCAGAAAAATTGGCGCCCGTCTTACGCCCTAGCAC
ATGTCAAGCTAGAAAGATCTACAACAACGTCACCTTGCTTGGTGGAATGC
GTGCTGGAAACTATACCGCCCTAGGGCGTGCTACACATTTAGAAGATTGT
ATAGGGCGTGCTTGTGATCTAAATGAAGGTCATCTAGCTTTGATGCTTGG
GCGGTATTGTTACTCTGTCACGTGTAATAACCAGAGAACTTGCCAAACCA
TCCCAGCTAAACCAAGTCATCTGAGACCAAAAGTGGCTTATCTTGCCTGG
ACTCAAGACCCGATTGAACAAGATACAATAACAAATATGGCAGAGAGTGA
TTTCTTCGTCAATCATAAAAGATATCCACGGTGTAAACGGAGCCATATCA
TGTACAATCACACATTGAGAGGGGGCCTTAGAGCTGGTAATTTCTCAATG
CTTGCAACTGTAGATGATATTGAAGTTTGTGCTGCTCTATGCTGCGAAGA
AAAATATTGCGATTTGGTAACAAATATGGCAGAGAGTGATTTCTTCGTCA
ATCATAAAAGATATCCACGGTGTAAACGGAGCCATATCATGTACAATCAC
ACATTGAGAGGGGGCCTTAGAGCTGGTAATTTCTCAATGCTTGCAACTGT
AGATGATATTGAAGTTTGTGCTGCTCTATGCTGCGAAGAAAAATATTGCG
ATTTGGCCCTAATGATTGGTGATAACTGTTATGCTGGAGATTGCACCAGT
CCAGAACTATGTTCCGCTGTGCCTGTACCACCTGATTCATTACAACGATC
ACAAATCGCCTACATTACAGCACCTGGCAGAACTAAAGCTGAAGACAAAA
CAGCTAACTCAGCCCTAATGATTGGTGATAACTGTTATGCTGGAGATTGC
ACCAGTCCAGAACTATGTTCCGCTGTGCCTGTACCACCTGATTCATTACA
ACGATCACAAATCGCCTACATTACAGCACCTGGCAGAACTAAAGCTGAAG
ACAAAACAGCTAACTCAGATTGGAGTTATATCTATCTGGTTGTCAGTGCT
TTGGTTATTGGAATAAGTACCCTGGGTACGGCATGGACAATATGCTTATG
TGCCTTGAAATTGGAGTTATATCTATCTGGTTGTCAGTGCTTTGGTTATT
GGAATAAGTACCCTGGGTACGGCATGGACAATATGCTTATGTGCCTTGAA
GAGACATCGAAGACACATGGATAAACTGAGAAGCATGTCACTTGCAGAAA
GTTTACAGCAATCCAAACCATTATTAGAAACATCCATGAAAGGAGACATC
GAAGACACATGGATAAACTGAGAAGCATGTCACTTGCAGAAAGTTTACAG
CAATCCAAACCATTATTAGAAACATCCATGAAAGGTAACTACTTATTCGG
AGGTAATATTGGTCCAGTTGGGACATCAAGCCGAAATGATTCAAATATAA
ACACTTCTAATATTTCTGATGTGGATGAACAAGACAATAACAAAAATGGC
GCAACTTGAGTAACTACTTATTCGGAGGTAATATTGGTCCAGTTGGGACA
TCAAGCCGAAATGATTCAAATATAAACACTTCTAATATTTCTGATGTGGA
TGAACAAGACAATAACAAAAATGGCGCAACTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000071_pilon | genome | sc0000071_pilon:1289246..1294562 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1270-1392:124 |
| Aaloc | 1177-1266:776 |
| Aaloc | 1087-1173:1304 |
| Aaloc | 931-1083:1861 |
| Aaloc | 742-927:3413 |
| Aaloc | 364-738:4193 |
| Aaloc | 211-360:4540 |
| Aaloc | 1-207:5318 |
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