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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000140_pilon:378215..381013+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_035973 ID=XLOC_035973|Name=XLOC_035973|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2799bp|location=Sequence derived from alignment at sc0000140_pilon:378215..381013+ (Clytia hemisphaerica_ch_hm2_pilon)
atgaaaatgaagaatgttggaaacaatgaaaacataatgGTCGCAAACAG
AGAAGAGACAATAAACAAAGAAGAAGTGAAATctcctccccaatcctcct
cctcctcctcctccgaAGTGTCAAAAAACGATAAAAGCCAAAAACACCAA
GAAGCCACTGTAATGCAATCTCTTTCTCAAGGCGTCAATACTGATAGTGA
ATTGGCAATACACGACGAAATGCAAGCATGTCAACAAAAAACTGTAGTAG
AACCTCCTCAATCTTTCGAAGAAGAGGTGTCAAAACACGATGAAAGCCAA
AAATACCAAGAAGCCACTGTAATGCAATCTCCTTCTCAAGGCGTCAATAC
TGATAGTGAATTGGCAATACAGGATGAAAGCCATCAACACCAGCAAGTCA
CTGTAGTAGAACCTCCTCAATCTTCCAAAGAAGCAAAAGTGTCAAAACTC
GATGAAGGAGGTCAAGAAAACCAAGGAAACATTCAATCCGAAGACCAAGG
TTCAGATACTGATAATGGTATGGTATACTGTTCTATCTGAAGGAGGgact
gttttatttttcatttgtaattttcGGTCCATTATGTTCGAGATCTCATC
AAAAAACGGATCCCTGGTATTGCACTTTTCTTTGTGATTGGAATTATTAT
AAGtttttttCTTgagcaattttataagaacagaaggctAAAATTGGGAG
AAAAAGATACCCTGTCCGTTCCAAGCTTCACATCCCCGTACTTATCTCTT
TTTGCCTACAAAGTACTCTTAGTTACCGTATTATTTCGAAtaacgcccgg
ggcgtttattaatttttttttgattttaggaggggcgtttattcgagggg
gtgtttaaaagaagggggcatttattaaattatttgagtCTAACgttgaa
tattttaaaagcaAATCTACTCTTTGTTTTAGTTCAATACCAAGATTTCA
GTGCAAATTTCTTTGGGTCAGCGACTAAAATTGCATCAAAACTGATCTGG
TTAGAAAAAAGACTAAAATCTTTTCTAATCAAAACTTGTATCAAAGTATT
TAAatcacaagtttctaataaatgCCCCTCCCCTAGAGGGGGCGTCAATT
CGAAGGGGTCGTTTATTTCAGGGGGCgattaaaagaagggggcgtttttT
CGAAGTAGATCTCTCTGATTCGATCTTCAATGGGgtcaagaattttcttc
aaattaaaaagattcaaattaccGTGAGTAATTAATGATTAATAAttaag
gttcgaattagagattGTTAGCCGGTTTGTTTTTTAACGCGATCTGTACG
ATTTTTTAAGCAATGCAATTGGCTCTTTTCGCATACCGACGAGCTTACAA
GTATGACGTcagttattttcaaataaaatggaCACTACGTTGACATCATT
TCCATCtctttttcaagtttattttATCGTAAATTCACACAAGTCTTTCT
CTTTTTCAGTCGTCTTTCCCAGTATTCGCGCTATAAAGTGCAAACAAAAA
GAGACAGTTAACAAAGATATGTCTGGTTAGTGAGGGCTGCACTGATAAAT
ATCACCCGAGACGCAACAATGCTTCCGAGTCATTATTAGTAGGGGACCAA
TCCTTAggatccgtgacatcttttatgcgacgcaaccGCATGTGGTTAGT
TCGAAAGTAGGAAggttttaaagacttttttgagagggggcccgcgaatt
aggcccggcaaaagtttttatgactAAAAGACTGACGTTTACAGACaaaa
ctgtaagggtaaaaaatgggtaaaaaattgacgttttttaaaagtcgaat
ttgaaagaaatggATGAGACCatcggaaagagcatgaaattctgagcaaa
aaagtataaTACAACAAGTCTCTTACTCGAACGCACGAAGAAATACGGCC
ATCTAAAGTTTGAAATTCTGTCAGATGGAGTACGATTGGCGTCAAATTTT
GTATGTCACGGATCCTAAggattggccccctactatattAGAGTATTAGA
GTTAACtgtttttgaaatcaaattaaacccttcaaaaaatcatttccact
ttttttAGTTGTATTGGAGGTGGGAGAGCAACATCAgattattgtttttg
aaatcaaatttaacCCTTCAAAAACCATTTCCactttttttagttgtgtt
GGAGGTGGGAGAGCAACATCaaattattgtttttgaaatcaaattaaACC
CTTCAAAAAACCATTTCCACtttttttAGTTGTATTGGAGGTGGGAGAAC
AACATCAAATTATTGTCCAACAGAATGACCAAGAGCTCATCTTTTACGTC
ACTTATGAAGAAAATGTGGATGTAGATGTAGAAGGACAACCGAACTGTGG
CGATGGAGAATATGGTGGAACTCCAGTCGAACAGGTTGGTGCAttacacc
tatcaaccctttGAGCGGCGAGATTGGCTTTTTAGGGGACTGGtgatgaa
tttacaaggaagaTTTGCTCTCGGTGCACGGCATTTAGGCATTAGGCTGC
AACCAAATCAAACTAAGCAAATTCCCACCAAAACTCTTGAAAAAAGTATT
AACCAAACCTAAtccatttcaaagaatgaagtACTTAAAGAGTTTTTCAC
GAGGGAGGGGGCGGGGCGGTTTCTGCTGAGGCCCAGaaaaaaaCTGACAT
CACAGGGAAAAAATAGACCAAGTTTTATACGTCGCGTGAAAGATGTCATT
GGTCTAAGGGTTTGATAGGAGTTAATACTTTTTTATTACTCTATCATTTA
GATTCTCCTGTTCGATCCAACCCAAGCTGTCCAGCATCATCATGAAGAC Coding sequence (CDS) from alignment at sc0000140_pilon:378215..381013+ >XLOC_035973 ID=XLOC_035973|Name=XLOC_035973|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1566bp|location=Sequence derived from alignment at sc0000140_pilon:378215..381013+ (Clytia hemisphaerica_ch_hm2_pilon)
atgaaaatgaagaatgttggaaacaatgaaaacataatgGTCGCAAACAG
AGAAGAGACAATAAACAAAGAAGAAGTGAAATctcctccccaatcctcct
cctcctcctcctccgaAGTGTCAAAAAACGATAAAAGCCAAAAACACCAA
GAAGCCACTGTAATGCAATCTCTTTCTCAAGGCGTCAATACTGATAGTGA
ATTGGCAATACACGACGAAATGCAAGCATGTCAACAAAAAACTGTAGTAG
AACCTCCTCAATCTTTCGAAGAAGAGGTGTCAAAACACGATGAAAGCCAA
AAATACCAAGAAGCCACTGTAATGCAATCTCCTTCTCAAGGCGTCAATAC
TGATAGTGAATTGGCAATACAGGATGAAAGCCATCAACACCAGCAAGTCA
CTGTAGTAGAACCTCCTCAATCTTCCAAAGAAGCAAAAGTGTCAAAACTC
GATGAAGGAGGTCAAGAAAACCAAGGAAACATTCAATCCGAAGACCAAGG
TTCAGATACTGATAATGGTATGGTATACTGTTCTATCTatgaaaatgaag
aatgttggaaacaatgaaaacataatgGTCGCAAACAGAGAAGAGACAAT
AAACAAAGAAGAAGTGAAATctcctccccaatcctcctcctcctcctcct
ccgaAGTGTCAAAAAACGATAAAAGCCAAAAACACCAAGAAGCCACTGTA
ATGCAATCTCTTTCTCAAGGCGTCAATACTGATAGTGAATTGGCAATACA
CGACGAAATGCAAGCATGTCAACAAAAAACTGTAGTAGAACCTCCTCAAT
CTTTCGAAGAAGAGGTGTCAAAACACGATGAAAGCCAAAAATACCAAGAA
GCCACTGTAATGCAATCTCCTTCTCAAGGCGTCAATACTGATAGTGAATT
GGCAATACAGGATGAAAGCCATCAACACCAGCAAGTCACTGTAGTAGAAC
CTCCTCAATCTTCCAAAGAAGCAAAAGTGTCAAAACTCGATGAAGGAGGT
CAAGAAAACCAAGGAAACATTCAATCCGAAGACCAAGGTTCAGATACTGA
TAATGGTATGGTATACTGTTCTATCTatcaaattaaACCCTTCAAAAAAC
CATTTCCACtttttttAGTTGTATTGGAGGTGGGAGAACAACATCAAATT
ATTGTCCAACAGAATGACCAAGAGCTCATCTTTTACGTCACTTATGAAGA
AAATGTGGATGTAGATGTAGAAGGACAACCGAACTGTGGCGATGGAGAAT
ATGGTGGAACTCCAGTCGAACAGatcaaattaaACCCTTCAAAAAACCAT
TTCCACtttttttAGTTGTATTGGAGGTGGGAGAACAACATCAAATTATT
GTCCAACAGAATGACCAAGAGCTCATCTTTTACGTCACTTATGAAGAAAA
TGTGGATGTAGATGTAGAAGGACAACCGAACTGTGGCGATGGAGAATATG
GTGGAACTCCAGTCGAACAGATTCTCCTGTTCGATCCAACCCAAGCTGTC
CAGCATCATCATGAAGACATTCTCCTGTTCGATCCAACCCAAGCTGTCCA
GCATCATCATGAAGAC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000140_pilon | genome | sc0000140_pilon:378215..381013 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 742-789:2752 |
| Aaloc | 547-741:2190 |
| Aaloc | 436-543:430 |
| Aaloc | 97-432:94 |
| Aaloc | 1-93:1 |
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