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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000524_pilon:26221..29340+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_035963.2 ID=XLOC_035963.2|Name=XLOC_035963.2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3120bp|location=Sequence derived from alignment at sc0000524_pilon:26221..29340+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCATCTCCATCTCCAtcaaagaaaaccaaaaaaggTATTTCTCAAAC
ATTGACATTACATTCACCTGCATTTACATCTCATCCAGTCTGGAAGGAAG
GAAATGTTTATGCCAGAAATTTCCGTGCTATAGCCTTGGTATAAAAGCAT
CAGAAATCGTCTGCCGGAGATATCCGGTGGGCTCTCCAGATTGGCATGTC
ATCAATACACATCAGTGCTACTAGATTAGTCCTCCCTACTTTCAGTCCTT
ACCTTACCTTCACAAGGCGGTAACCTCTCTTCAGTCCTTACCTTACCTTC
ATAAGGCGGTTAtcaaaatatctttgtttcgtgTTGCCCGATTGACTCtt
gaaaattgagtaaatttGAGTCAGTAATGTCAGACTTTTTGTGACAATGA
CttttcctttgctcaaaaattttacttttgctAATATTAATTGTgagcaa
tacacctttcccgtattTCAGATTTCCCGGAAAAAGACCTGTTCTCCAcc
attgtgatattttttcACGGGAGGTAAACAAACTCGATTTTGCCTACGTT
TGCTTAGGGGAAAGCAGTTTTTGTCTTCTATCTTTTGATGCACAAAttcg
tttttaaaaaaatttggaggGTAGTATTGTATCATGAATAGTAAAAACAT
ACCATAGTTTGAAGAAATTCTATACGATGGAAGTTgagaaaagtccaaaa
aaccacCTTTTTCTAAGCAATCGCCAGCAAAAAtaggtttgtttacctcc
cgtCCAAGAAACGATGGAGAGCCAAAAAATATGCGCGcgcatattttttt
ttgaaatacgggaaaggtgtattgccgCCTAAATTTGACAATAAATCATT
GGTATAACTCAAAGTTTTCAAGCTAAAAGGACTTTCGCAATACATTAACT
GgtaaattaaaatctttttatttttagatctAGTTAACTTGGAAGGCTAC
GTCAATTTTGTGGGTTCACCAAGAAAAGCCAAGCAAAAGGCTGCCGACAA
AAAGGAAATCGAGTTCTTTGAAGTATCAGTCAATTGTGAAAACAATACGG
TCCGTGCTGTTTGTTATGATCTCGATCGCAGACCTTTGTTGGAAAAATTC
AACAAAGAAAGTAACTCCTGCTGCTTGCTGAATGCAGAAAAATCAGATAA
TGATGTCATTATTCTAGATGATACAATTATTAAACAAAAGAAGGTTGCTT
TTGATAACAAAACTTTTGAACCACAGATTACATCATTAATGTCAGTTTTA
CAAGAAATTCCCATTTGGGCCAGAGTATCAGTGCTTGGCAGAATCTATGA
CCTACAAGACACGTCCTcatcttcaaaacaaaagacaaaACTTAGAGAAG
CCAAAATCATTGACCAATCAAATGTTTCCCGTCAGATAACTTTCTTTGAC
CACTTTGATGAAGTTGATGAAGGTAAGgatgttttaagaatttttaattg
tttctatTCATTACCATCCTCTCCTGACAACTTAATTCCCTGGTGAACTC
TCAAAAGTTTGATTGGAACAGTGCGAATTTTTTAATATGCTTAAATTTGA
TTTAGCTCCCCCTGACACGAGCTTTAttgggcagttccagaaaaaaacca
ttacccCCCTGTGGACAACAgggttttttggaattttttgtcacttggaa
atcctgagaaaatttgagaaaggtCTCGGAAAATccattatttttcttca
ttattttgtCATCCGTATCGGAAAATCctggaaaatccataaaatttgct
ctattttcttgcaaagtatcggaaaatccaagatttttccttaaaaaatc
ttgaatgttacGGAAATCCTTAAGTTtctcaaaagtaaattgttacgGAA
AATCCATGTCGTCCACAGGGGGGTAACGGACTATAACTGGAACCGCCCAT
TGGTCACATATGGTGAAATACATTACGTAATCTAACTACATGTTTGTGAA
TTTGACCCTCAACAGTACAGCCACTTTTCATTAATTTAGTTACGTTGTTA
AGTAAAGTGAGGTTAAATTTAATTACACTTTGCGCTAGCTTGTGGTAAAC
CATTTTAGCATGGCTTCAAATGATAAAAGTGGTGCGCCTCTCATTATTgt
ggctttttttttttttcgaccaaAAGCAAGTATTTAATTCATATGACGGC
CATCGAAAAATGTTCTATTCGTGTCACCCACCCGCAtcatttttcgctga
ttttccaGTGCGGAGATTCCGGTGAGGCAAAATccgggaaaagcaatttg
ttcttataaggtATAGCTGTTTTCTTGATCGCTCTTGGAGGCCATAAAAA
ATTGTATTGTTTTGCCGCAATTTTGAAATACCTGGGAATTTTTCCACCGC
CTGTCCACCCGCATGAATTTTTAACATCCGCTGTGACGCTAACAGagcaa
tttttcgatggccgtaTGCGCAATGTGAACTATATTTATTTTGCCTAAAT
ATAGCGCACAAGTTAGAAAATAAATGAGTTTGAGAAAATAAATGAGTTTG
TTTTTCATGCAActtaactttctttttcttttaatttaggGAAAGTATAC
AAGATTACAAATGTAATGGTTGCAAAGTATGATAAGAAGAAAGTCCTCAA
AGTTTCGGAAAATTCTTCAATCCAAGAAATTCATGATAAACCTGAAATTC
CAAAACCAGCAACAACCACTCGCTCATCTGAAAAATGTTCCGGTATAGTT
TGTATGGTCGACCCGAAATCCTTGAATACAAGATTTTTATGCGGTAAATG
TGAAAAAGAAACACAACGCAATCATGATAACTTGTTTTATTGTTGCAATA
ACATATCAATCGAGTCAGAAATGGTGAAGAAAGAAGACGTCATTTTCATG
GTGAAATCGTCAGTCGGTGAAGAAAGTCTTAAAATTCAATTAAATTCGAA
AAAGCATCTGCTGGAAAGTATGGTTGGTGTGCCGACAACAAATCCTTTAT
TTCTCAAGTTATTTATGGGATCCAAAGTTGATGTTACTTATAAAATGGTT
TCAACTGTGAAAGATGTTGTCGACATATCGGATTGTGCTCAACAATCAAC
ATCTAAATTGGCTCCCCAAAACATTGACGAACAGCCTTCAACTGACTCTA
TAAATACAGAAAGTAACTGA Coding sequence (CDS) from alignment at sc0000524_pilon:26221..29340+ >XLOC_035963.2 ID=XLOC_035963.2|Name=XLOC_035963.2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2226bp|location=Sequence derived from alignment at sc0000524_pilon:26221..29340+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCATCTCCATCTCCAtcaaagaaaaccaaaaaagATGGCATCTCCAT
CTCCAtcaaagaaaaccaaaaaagatctAGTTAACTTGGAAGGCTACGTC
AATTTTGTGGGTTCACCAAGAAAAGCCAAGCAAAAGGCTGCCGACAAAAA
GGAAATCGAGTTCTTTGAAGTATCAGTCAATTGTGAAAACAATACGGTCC
GTGCTGTTTGTTATGATCTCGATCGCAGACCTTTGTTGGAAAAATTCAAC
AAAGAAAGTAACTCCTGCTGCTTGCTGAATGCAGAAAAATCAGATAATGA
TGTCATTATTCTAGATGATACAATTATTAAACAAAAGAAGGTTGCTTTTG
ATAACAAAACTTTTGAACCACAGATTACATCATTAATGTCAGTTTTACAA
GAAATTCCCATTTGGGCCAGAGTATCAGTGCTTGGCAGAATCTATGACCT
ACAAGACACGTCCTcatcttcaaaacaaaagacaaaACTTAGAGAAGCCA
AAATCATTGACCAATCAAATGTTTCCCGTCAGATAACTTTCTTTGACCAC
TTTGATGAAGTTGATGAAGatctAGTTAACTTGGAAGGCTACGTCAATTT
TGTGGGTTCACCAAGAAAAGCCAAGCAAAAGGCTGCCGACAAAAAGGAAA
TCGAGTTCTTTGAAGTATCAGTCAATTGTGAAAACAATACGGTCCGTGCT
GTTTGTTATGATCTCGATCGCAGACCTTTGTTGGAAAAATTCAACAAAGA
AAGTAACTCCTGCTGCTTGCTGAATGCAGAAAAATCAGATAATGATGTCA
TTATTCTAGATGATACAATTATTAAACAAAAGAAGGTTGCTTTTGATAAC
AAAACTTTTGAACCACAGATTACATCATTAATGTCAGTTTTACAAGAAAT
TCCCATTTGGGCCAGAGTATCAGTGCTTGGCAGAATCTATGACCTACAAG
ACACGTCCTcatcttcaaaacaaaagacaaaACTTAGAGAAGCCAAAATC
ATTGACCAATCAAATGTTTCCCGTCAGATAACTTTCTTTGACCACTTTGA
TGAAGTTGATGAAGgGAAAGTATACAAGATTACAAATGTAATGGTTGCAA
AGTATGATAAGAAGAAAGTCCTCAAAGTTTCGGAAAATTCTTCAATCCAA
GAAATTCATGATAAACCTGAAATTCCAAAACCAGCAACAACCACTCGCTC
ATCTGAAAAATGTTCCGGTATAGTTTGTATGGTCGACCCGAAATCCTTGA
ATACAAGATTTTTATGCGGTAAATGTGAAAAAGAAACACAACGCAATCAT
GATAACTTGTTTTATTGTTGCAATAACATATCAATCGAGTCAGAAATGGT
GAAGAAAGAAGACGTCATTTTCATGGTGAAATCGTCAGTCGGTGAAGAAA
GTCTTAAAATTCAATTAAATTCGAAAAAGCATCTGCTGGAAAGTATGGTT
GGTGTGCCGACAACAAATCCTTTATTTCTCAAGTTATTTATGGGATCCAA
AGTTGATGTTACTTATAAAATGGTTTCAACTGTGAAAGATGTTGTCGACA
TATCGGATTGTGCTCAACAATCAACATCTAAATTGGCTCCCCAAAACATT
GACGAACAGCCTTCAACTGACTCTATAAATACAGAAAGTAACTGAgGAAA
GTATACAAGATTACAAATGTAATGGTTGCAAAGTATGATAAGAAGAAAGT
CCTCAAAGTTTCGGAAAATTCTTCAATCCAAGAAATTCATGATAAACCTG
AAATTCCAAAACCAGCAACAACCACTCGCTCATCTGAAAAATGTTCCGGT
ATAGTTTGTATGGTCGACCCGAAATCCTTGAATACAAGATTTTTATGCGG
TAAATGTGAAAAAGAAACACAACGCAATCATGATAACTTGTTTTATTGTT
GCAATAACATATCAATCGAGTCAGAAATGGTGAAGAAAGAAGACGTCATT
TTCATGGTGAAATCGTCAGTCGGTGAAGAAAGTCTTAAAATTCAATTAAA
TTCGAAAAAGCATCTGCTGGAAAGTATGGTTGGTGTGCCGACAACAAATC
CTTTATTTCTCAAGTTATTTATGGGATCCAAAGTTGATGTTACTTATAAA
ATGGTTTCAACTGTGAAAGATGTTGTCGACATATCGGATTGTGCTCAACA
ATCAACATCTAAATTGGCTCCCCAAAACATTGACGAACAGCCTTCAACTG
ACTCTATAAATACAGAAAGTAACTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000524_pilon | genome | sc0000524_pilon:26221..29340 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 535-1113:2542 |
| Aaloc | 40-531:930 |
| Aaloc | 1-36:1 |
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