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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000237_pilon:259109..262220+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_035963 ID=XLOC_035963|Name=XLOC_035963|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3112bp|location=Sequence derived from alignment at sc0000237_pilon:259109..262220+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCATCTCCATCTCCAtcaaagaaaaccaaaaaaggTATTTCTCAAAC
ATTGACATTACATTCACCTGCATTTACATCTCATCCAGTCTGGAAGGAAG
GAAATGTTTATGCCAGAAATTTCCGTGCTATAGCCTTGGTATAAAAGCAT
CAGAAATCGTCTGCCGGAGATATCCGGTGGGCTCTCCAGATTGGCATGTC
ATCAATACACATCAGTGCTACTAGATTAGTCCTCCCTACTTTCAGTCCTT
ACCTTACCTTCACAAGGCGGTAACCTCTCTTCAGTCCTTACCTTACCTTC
ATAAGGCGGTTAtcaaaatatctttgtttcgtgTTGCCCGATTGACTCtt
gaaaattgagtaaatttGAGTCAGTAATGTCAGACTTTTTGTGACAATGA
CttttcctttgctcaaaaattttacttttgctAATATTAATTGTgagcaa
tacacctttcccgtattTCAGATTTCCCGGAAAAAGACCTGTTCTCCAcc
attgtgatattttttcACGGGAGGTAAACAAACTCGATTTTGCCTACGTT
TGCTTAGGGGAAAGCAGTTTTTGTCTTCTATCTTTTGATGCACAAAttcg
tttttaaaaaaatttggaggGTAGTATTGTATCATGAATAGTAAAAACAT
ACCATAGTTTGAAGAAATTCTATACGATGGAAGTTgagaaaagtccaaaa
aaccacCTTTTTCTAAGCAATCGCCAGCAAAAAtaggtttgtttacctcc
cgtCCAAGAAACGATGGAGAGCCAAAAAATATGCGCGcgcatattttttt
tgaaatacgggaaaggtgtattgccgCCTAAATTTGACAATAAATCATTG
GTATAACTCAAAGTTTTCAAGCTAAAAGGACTTTCGCAATACATTAACTG
gtaaattaaaatctttttatttttagatctAGTTAACTTGGAAGGCTACG
TCAATTTTGTGGGTTCACCAAGAAAAGCCAAGCAAAAGGCTGCCGACAAA
AAGGAAATCGAGTTCTTTGAAGTATCAGTCAATTGTGAAAACAATACGGT
CCGTGCTGTTTGTTATGATCTCGATCGCAGACCTTTGTTGGAAAAATTCA
ACAAAGAAAGTAACTCCTGCTGCTTGCTGAATGCAGAAAAATCAGATAAT
GATGTCATTATTCTAGATGATACAATTATTAAACAAAAGAAGGTTGCTTT
TGATAACAAAACTTTTGAACCACAGATTACATCATTAATGTCAGTTTTAC
AAGAAATTCCCATTTGGGCCAGAGTATCAGTGCTTGGCAGAATCTATGAC
CTACAAGACACGTCCTcatcttcaaaacaaaagacaaaACTTAGAGAAGC
CAAAATCATTGACCAATCAAATGTTTCCCGTCAGATAACTTTCTTTGACC
ACTTTGATGAAGTTGATGAAGGTAAGgatgttttaagaatttttaattgt
ttctatTCATTACCATCCTCTCCTGACAACTTAATTCCCTGGTGAACTCT
CAAAAGTTTGATTGGAACAGTGCGAATTTTTTAATATGCTTAAATTTGAT
TTAGCTCCCCCTGACACGAGCTTTAttgggcagttccagaaaaaaaccat
tacccCCCTGTGGACAACAgggttttttggaattttttgtcacttggaaa
tcctgagaaatttgaGAAAGGTCTCGGAAAATccattatttttcttcatt
attttgtCATCCGTATCGGAAAATCctggaaaatccataaaatttgctct
attttcttgcaaagtatcggaaaatccaagatttttccttaaaaaatctt
gaatgttacGGAAATCCTTAAGTTtctcaaaagtaaattgttacgGAAAA
TCCATGTCGTCCACAGGGGGGTAACGGACTATAACTGGAACCGCCCATTG
GTCACATATGGTGAAATACATTACGTAATCTAACTACATGTTTGTGAATT
TGACCCTCAACAGTACAGCCACTTTTCATTAATTTAGTTACGTTGTTAAG
TAAAGTGAGGTTAAATTTAATTACACTTTGCGCTAGCTTGTGGTAAACCA
TTTTAGCATGGCTTCAAATGATAAAAGTGGTGCGCCTCTCATTATTGTGG
CttttttttCGACCAAAAGCAAGTATTTAATTCATATGACGGCCATCGAA
AAATGTTCTATTCGTGTCACCCACCCGCAtcatttttcgctgattttcca
GTGCGGAGATTCCGGTGAGGCAAAATccgggaaaagcaatttgttcttat
aaggtATAGCTGTTTTCTTGATCGCTCTTGGAGGCCATAAAAAATTGTAT
TGTTTGCCGCAATTTTGAAATACCTGGGAATTTTTCCACCGCCTGTCCAC
CCGCATGAATTTTTAACATCCGCTGTGACGCTAACAGagcaatttttcga
tggccgtaTGCGCAATGTGAACTATATTTATTTTGCCTAAATATAGCGCA
CAAGTTAGAAAATAAATGAGTTTGAGAAAATAAATGAGTTTGTTTTTCAT
GCAActtaactttctttttcttttaatttaggGAAAGTATACAAGATTAC
AAATGTAATGGTTGCAAAGTATGATAAGAAGAAAGTCCTCAAAGTTTCGG
AAAATTCTTCAATCCAAGAAATTCATGATAAACCTGAAATTCCAAAACCA
GCAACAACCACTCGCTCATCTGAAAAATGTTCCGGTATAGTTTGTATGGT
CGACCCGAAATCCTTGAATACAAGATTTTTATGCGGTAAATGTGAAAAAG
AAACACAACGCAATCATGATAACTTGTTTTATTGTTGCAATAACATATCA
ATCGAGTCAGAAATGGTGAAGAAAGAAGACGTCATTTTCATGGTGAAATC
GTCAGTCGGTGAAGAAAGTCTTAAAATTCAATTAAATTCGAAAAAGCATC
TGCTGGAAAGTATGGTTGGTGTGCCGACAACAAATCCTTTATTTCTCAAG
TTATTTATGGGATCCAAAGTTGATGTTACTTATAAAATGGTTTCAACTGT
GAAAGATGTTGTCGACATATCGGATTGTGCTCAACAATCAACATCTAAAT
TGGCTCCCCAAAACATTGACGAACAGCCTTCAACTGACTCTATAAATACA
GAAAGTAACTGA Coding sequence (CDS) from alignment at sc0000237_pilon:259109..262220+ >XLOC_035963 ID=XLOC_035963|Name=XLOC_035963|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2226bp|location=Sequence derived from alignment at sc0000237_pilon:259109..262220+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCATCTCCATCTCCAtcaaagaaaaccaaaaaagATGGCATCTCCAT
CTCCAtcaaagaaaaccaaaaaagatctAGTTAACTTGGAAGGCTACGTC
AATTTTGTGGGTTCACCAAGAAAAGCCAAGCAAAAGGCTGCCGACAAAAA
GGAAATCGAGTTCTTTGAAGTATCAGTCAATTGTGAAAACAATACGGTCC
GTGCTGTTTGTTATGATCTCGATCGCAGACCTTTGTTGGAAAAATTCAAC
AAAGAAAGTAACTCCTGCTGCTTGCTGAATGCAGAAAAATCAGATAATGA
TGTCATTATTCTAGATGATACAATTATTAAACAAAAGAAGGTTGCTTTTG
ATAACAAAACTTTTGAACCACAGATTACATCATTAATGTCAGTTTTACAA
GAAATTCCCATTTGGGCCAGAGTATCAGTGCTTGGCAGAATCTATGACCT
ACAAGACACGTCCTcatcttcaaaacaaaagacaaaACTTAGAGAAGCCA
AAATCATTGACCAATCAAATGTTTCCCGTCAGATAACTTTCTTTGACCAC
TTTGATGAAGTTGATGAAGatctAGTTAACTTGGAAGGCTACGTCAATTT
TGTGGGTTCACCAAGAAAAGCCAAGCAAAAGGCTGCCGACAAAAAGGAAA
TCGAGTTCTTTGAAGTATCAGTCAATTGTGAAAACAATACGGTCCGTGCT
GTTTGTTATGATCTCGATCGCAGACCTTTGTTGGAAAAATTCAACAAAGA
AAGTAACTCCTGCTGCTTGCTGAATGCAGAAAAATCAGATAATGATGTCA
TTATTCTAGATGATACAATTATTAAACAAAAGAAGGTTGCTTTTGATAAC
AAAACTTTTGAACCACAGATTACATCATTAATGTCAGTTTTACAAGAAAT
TCCCATTTGGGCCAGAGTATCAGTGCTTGGCAGAATCTATGACCTACAAG
ACACGTCCTcatcttcaaaacaaaagacaaaACTTAGAGAAGCCAAAATC
ATTGACCAATCAAATGTTTCCCGTCAGATAACTTTCTTTGACCACTTTGA
TGAAGTTGATGAAGgGAAAGTATACAAGATTACAAATGTAATGGTTGCAA
AGTATGATAAGAAGAAAGTCCTCAAAGTTTCGGAAAATTCTTCAATCCAA
GAAATTCATGATAAACCTGAAATTCCAAAACCAGCAACAACCACTCGCTC
ATCTGAAAAATGTTCCGGTATAGTTTGTATGGTCGACCCGAAATCCTTGA
ATACAAGATTTTTATGCGGTAAATGTGAAAAAGAAACACAACGCAATCAT
GATAACTTGTTTTATTGTTGCAATAACATATCAATCGAGTCAGAAATGGT
GAAGAAAGAAGACGTCATTTTCATGGTGAAATCGTCAGTCGGTGAAGAAA
GTCTTAAAATTCAATTAAATTCGAAAAAGCATCTGCTGGAAAGTATGGTT
GGTGTGCCGACAACAAATCCTTTATTTCTCAAGTTATTTATGGGATCCAA
AGTTGATGTTACTTATAAAATGGTTTCAACTGTGAAAGATGTTGTCGACA
TATCGGATTGTGCTCAACAATCAACATCTAAATTGGCTCCCCAAAACATT
GACGAACAGCCTTCAACTGACTCTATAAATACAGAAAGTAACTGAgGAAA
GTATACAAGATTACAAATGTAATGGTTGCAAAGTATGATAAGAAGAAAGT
CCTCAAAGTTTCGGAAAATTCTTCAATCCAAGAAATTCATGATAAACCTG
AAATTCCAAAACCAGCAACAACCACTCGCTCATCTGAAAAATGTTCCGGT
ATAGTTTGTATGGTCGACCCGAAATCCTTGAATACAAGATTTTTATGCGG
TAAATGTGAAAAAGAAACACAACGCAATCATGATAACTTGTTTTATTGTT
GCAATAACATATCAATCGAGTCAGAAATGGTGAAGAAAGAAGACGTCATT
TTCATGGTGAAATCGTCAGTCGGTGAAGAAAGTCTTAAAATTCAATTAAA
TTCGAAAAAGCATCTGCTGGAAAGTATGGTTGGTGTGCCGACAACAAATC
CTTTATTTCTCAAGTTATTTATGGGATCCAAAGTTGATGTTACTTATAAA
ATGGTTTCAACTGTGAAAGATGTTGTCGACATATCGGATTGTGCTCAACA
ATCAACATCTAAATTGGCTCCCCAAAACATTGACGAACAGCCTTCAACTG
ACTCTATAAATACAGAAAGTAACTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000237_pilon | genome | sc0000237_pilon:259109..262220 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 535-1113:2534 |
| Aaloc | 40-531:929 |
| Aaloc | 1-36:1 |
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