|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000071_pilon:1334987..1337623- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_035959 ID=XLOC_035959|Name=XLOC_035959|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2637bp|location=Sequence derived from alignment at sc0000071_pilon:1334987..1337623- (Clytia hemisphaerica_ch_hm2_pilon)
TCCTCATCGTCATTCCCGACCATCCACGGCATTAAATCAGAACCTATGGA
AGATCAAGACTTTCCACAAGGTTGCCAAGAAACTACAATTCGATTGCCTA
AGAATGAAGTCGATGACCTAGAAGATGTTAAGCCGACTTTGACTTTAAAC
ATGAAGGACACAAATAGAAAATCTTCAAAATCATCTTCGAAGAAAAGACT
TGACAATAGTAAGTTTTTTTGAATCTTCTATTCTCAACGCTACGCCGTAT
TGTTGGAAAATTGCAAATGAATAATATCAAAGTTTCAAAAGGGCAAAGTG
TTTTATGGATTTTAATTTTTATTGTCTTCATACAAGTCATACAAGACTTC
AGTAAGTCATGCGCTGTTGTTTATTAAAAATGTTTTTTTCCCAATCAACC
ATGAAAGATTCAACCTAAATTTAACATGTAATACGTACCTAAAGTCGAAG
CCTGAAGCAAAAATTTGTATTTTTGAGCCTCTCTAAAAATGGCATTCTTA
GATTCAGTTTGGAAATTTTATGATGGTGATATTTTCAGCATATTTTTAAT
TATTTGGCCAAATTCATATAAAAAAAAAAGCGTGCCATGATGGAAAATTG
AAAGTGAGTAATGTAAAATAAAAGTTTTGATGGGGAAAGTTTTGTATTGT
ATGGATTTTATTTTTTCATTACCTTAATACAAAACTTTTGAATTTATGAA
ATTAGTCACTTTAACGCTCTTCCCGGCTAAACCACCAATTCAATTTTGTT
ATCTATCTAGAAGAGTTCAAATCATTGTTGGAAAGATCAAGATTATACCC
ACCATTTCAGCAGGTATGAAAATAATAGTCCAATCCCTAAAAATACTTTG
GAAAATGTTGCTCCCTTCTTTCTCCAAGAATTAAAAAAAGGTCGATATCT
TTTACGTGGATACCCAGATGACACACAACGTTATTTCAACGTTAATCTAA
AATTCACAGCGTCCATACAACGTTAGAAACAACGTTTTGTGCCAGCTGGT
AGCTAAGTAACAGAGTAGCCTAGTAGTTTTAAATTGTTTCCACGTGGTCT
ACAGCTAGGCTGCCTAAGATTTTAAAACCTAAGATAGGAAAAAACGGGTA
TTCGAACTGAGGACCCCTGTCTCATGTTGCTGTCGCCTTAGACCATGCAC
TCGGTATTCGCTCCTTAAAAAGCATTCTCTTCATATGCCAGTATCTTAAG
AGAATTATCCAAAACTTTCAGAATAAAGCATTTTTCAAATATTTTCCAGT
TACAGCGTTTTTGCCAGATGCAATCGATGGCTATGAATCCAGCTCAACAA
TATTCATTCCCAACCAACAACAACCAACAAAATCACAGCATACTCAACAG
TATAATGTATTCAAATCTATTCAATAACGGATACAATTTAAACACCAGTA
GCAGTTCTACTTCGTCGCCATGGAGATACAGTAGGTGCATGTTCATCTGA
TTTAACAATTTTATAGAGTATCAGGAGTATGTAGAGTCCACTGAGTAATT
TTCCTCATAAATTGTTGTCGAGTTTTTCCTAGAAATCACGGCTTTTCCTT
TTAGTGGTTTATCTACTCAGGCATTTTCGAGGTTTAAGGTACTCTGGCCG
TTCACATATAGTTTTAATATCCATTTTGTCAAAGTCCTTGGTCCCGGATA
TTTCTTGTGAAGAAATCTCCCAGCCTCGTTTCCAGCGTATTATCGGCTTT
TTGATGCTTACTGATAGCGCAAACTTAAACAGCCAACACCAGTGTATTTC
CTGGTGTCCAAAAGTAGGGTAATAAAGCCTGAGATGCACGGGGACAAATT
AGAAGTTTACTCAACATGGAAATCGCATTAAATGGTATAATCTATTCTAT
ATATTATTTATCAGGTTCGACTCAACAAGAAGATCAATTAAGATCGATGC
ACGAGAACTTTGAAATAATGTTACAGGCTGCAAACGAACTTGAAGCCTCT
ACACGACGAAATGAAAACGTCGATGATGATGAAGCTAATGATATATTTAA
AGATATAAGTATGAGGGTACGTATGGTATGCTTAGTAGAGATCCACCCTT
TAATTAACCTATTTCATAGGATTCGTGCATCTGTTACACGCTTTTTCTAT
TAGATTTGAAGTGGGAAAAGGCACAAATCTCTGCAGATTTCTGTTTGTGA
AGGACGTTGAAAAAATTTGCCACCGTTCATTTGACTTGGGAATTCATGAG
CTCTTTTCCATAGTTTTTGCCTTTGTACAAGTTATAATCTCAAGTGACGT
AGTGACATAGAAAAATATCATGTGCTTAAAACATAAATCCCATGAAATAG
CGAAAATAAATCTTATCCAAGGTTTATTCGTTCTAATTTTTCGTGATTTC
CAGGCTTAATGCTCTTGAAATGTTTTTAGAATAGGACTTATATGTAGGTG
CATTTTCATTAAACACTACCATCCCGTTTTATTTGTTTCTAGCTCCTTGT
CCAGAAAAAATAGGCCATTGGGTAGAGGGCAGTGACCTCTGTCTTAAGCT
TCTGATAGAAAGCAAACGTCAAAACTTTTCATTTAAAATAAATTCTCCTT
TTGTAGTCCTGCAGCCCTGTATCAATTAGCTCATCAATTTCAACAGAAGA
TTTAGAGAAACTTTTAATGGAGACACAATCTAACACT Coding sequence (CDS) from alignment at sc0000071_pilon:1334987..1337623- >XLOC_035959 ID=XLOC_035959|Name=XLOC_035959|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1350bp|location=Sequence derived from alignment at sc0000071_pilon:1334987..1337623- (Clytia hemisphaerica_ch_hm2_pilon)
TCCTCATCGTCATTCCCGACCATCCACGGCATTAAATCAGAACCTATGGA
AGATCAAGACTTTCCACAAGGTTGCCAAGAAACTACAATTCGATTGCCTA
AGAATGAAGTCGATGACCTAGAAGATGTTAAGCCGACTTTGACTTTAAAC
ATGAAGGACACAAATAGAAAATCTTCAAAATCATCTTCGAAGAAAAGACT
TGACAATATCCTCATCGTCATTCCCGACCATCCACGGCATTAAATCAGAA
CCTATGGAAGATCAAGACTTTCCACAAGGTTGCCAAGAAACTACAATTCG
ATTGCCTAAGAATGAAGTCGATGACCTAGAAGATGTTAAGCCGACTTTGA
CTTTAAACATGAAGGACACAAATAGAAAATCTTCAAAATCATCTTCGAAG
AAAAGACTTGACAATAAAGAGTTCAAATCATTGTTGGAAAGATCAAGATT
ATACCCACCATTTCAGCAGAAGAGTTCAAATCATTGTTGGAAAGATCAAG
ATTATACCCACCATTTCAGCAGTTACAGCGTTTTTGCCAGATGCAATCGA
TGGCTATGAATCCAGCTCAACAATATTCATTCCCAACCAACAACAACCAA
CAAAATCACAGCATACTCAACAGTATAATGTATTCAAATCTATTCAATAA
CGGATACAATTTAAACACCAGTAGCAGTTCTACTTCGTCGCCATGGAGAT
ACATTACAGCGTTTTTGCCAGATGCAATCGATGGCTATGAATCCAGCTCA
ACAATATTCATTCCCAACCAACAACAACCAACAAAATCACAGCATACTCA
ACAGTATAATGTATTCAAATCTATTCAATAACGGATACAATTTAAACACC
AGTAGCAGTTCTACTTCGTCGCCATGGAGATACAGTTCGACTCAACAAGA
AGATCAATTAAGATCGATGCACGAGAACTTTGAAATAATGTTACAGGCTG
CAAACGAACTTGAAGCCTCTACACGACGAAATGAAAACGTCGATGATGAT
GAAGCTAATGATATATTTAAAGATATAAGTATGAGGGTTCGACTCAACAA
GAAGATCAATTAAGATCGATGCACGAGAACTTTGAAATAATGTTACAGGC
TGCAAACGAACTTGAAGCCTCTACACGACGAAATGAAAACGTCGATGATG
ATGAAGCTAATGATATATTTAAAGATATAAGTATGAGGTCCTGCAGCCCT
GTATCAATTAGCTCATCAATTTCAACAGAAGATTTAGAGAAACTTTTAAT
GGAGACACAATCTAACACTTCCTGCAGCCCTGTATCAATTAGCTCATCAA
TTTCAACAGAAGATTTAGAGAAACTTTTAATGGAGACACAATCTAACACT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000071_pilon | genome | sc0000071_pilon:1334987..1337623 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 595-675:82 |
| Aaloc | 445-594:772 |
| Aaloc | 262-441:1389 |
| Aaloc | 211-261:1876 |
| Aaloc | 1-207:2638 |
|
