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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000140_pilon:495472..499444- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_035947 ID=XLOC_035947|Name=XLOC_035947|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3973bp|location=Sequence derived from alignment at sc0000140_pilon:495472..499444- (Clytia hemisphaerica_ch_hm2_pilon)
ATAACCAAACAATACTATTGGAGTCTACAAAGAGCTTCTATCACAAGGAA
AGTTAATCGACTCTAAAGAGAAAACCAAGAGATCCTTCCACATAACCAGT
CAAACTCAGATAGGAAGAAAAAGAGAGTGTTTCAAATAAAAGCACAGAAC
AAAAGAAGGTTTCAATCAAATCCACAAACTCATACCAAAACACTTTGTAA
AACAACAATGGCTCCATGCTCAAACACAAAGTGTCAACAACAACCAGAGC
CTCCATTTATTTACCAAAAACCACCATCATCAAGCAACACCAAAGAATCC
TTCGACAATCTCAACAACATTCATCAATCATCCCCAATCATCACCGAAGA
TGATACAGAATCACCAGAACCACCATTACAACCAGTATCTCCAGAAGAGG
ATATTATATTTCAGCTTCATCCTCAACGTTGGTTCGTCCTGGCATCATAT
TGCCTCCTATCCTTGGTCTGTGGCTCAAATTGGCTTTGCTTTCCAGCAGT
ATCCAACATCTTAAGAGAATATTACCAAATCAGCATCTTGTCGATCAATA
TGCTTTCAATCGTATTTGGAATCTGTTTAGTTCTTTTCTCCATACCATTT
GCACTGCTGTTGAACAAATATGGTCTTGCAGTGGTAATGCAGACGTCAGC
ATTTCTCAATTTAACAGGTTTGCTATTTTACTACGATTAATTGCAAACGA
TTGTACCAAGATGATTAGTTTAGAACGGTTCACATGTATCCGTTGTTCGA
TTATGTGGTTCTTGAACTCTAGAATCTCAAGCGTGCCCTTTTGGCAACAA
TTATCTAAAAATTATTTAATTGAACCTGTCCCCCCAATAAAGAATAAAAG
AACATAGACAAGTAAGGCGAGACCAATTTAATTTGTTGTTCTACGGGCCC
GACCGACCCTATTTTTGCTAAAATCAAAAAATAATAATATTGAATTGCCA
CCACAATATATTTTACTCACTACTTATTTGTAAGAATCAATTTGAATAAA
GCTGAAAATTAATTCAAAAAATTGAAAAATTTAAAAAATCAAGCATTCCA
TACACTAAGATTTTATTATGATCTTCATCGAAGATAAAAAAAAGTGAATT
TTTGATCTATATATTTTTTGGAAAACATTTTCGGTACTTTACCAACCCTG
ATAAATGAAAAATTTATTCTTATTTTACCGACCGACCGACCTATATTTTG
CTAACAATCTGCCCGTAGAACAACAAATTAAATTGGTTTCGCCTAATGAA
TTTTAGAAGGTCGAAGAAGAGAATTTCAAAACATCTCGTTTTTAAGTAAG
AATATTTTGTGTACTTTGGATCAATGGGTATTCACAAACGACTTTCTCCT
TTTTTTTCCGGACACCCTGTATTGATATGAAAATTCATAAGTTATTGATT
TTCTTGTATTTCAGGAGCCCTTATCAAATATTTTGGAGATGATGCAGATC
ATGGCTACTGGTTCCTGCTCTGTGGTAACACATTTCACGCCTTGTCTGTA
GCAGGCTTCCTCTTCCTGCCAGGAGACATCGCATCCACTTGGTTCGGGGA
ACACGAAGCAGGGAAGGCTACATCCCTATGTGTAGCATTCGACGCTTTAG
GGACCGGGGTAGGCTTCTTACTAGCTACCACCATCGTTCAAGGAAATGAA
GACCCCTACATTGTTCAAGGTAGCATCAAGCAGTTCCTATTATCTCAGCT
GATTCCATCGGTAGCTGTCTTTCTATTTGTCTTGTTGTTCGTGAGAAGAA
GACCTCCCCATCCACCGAACTTCAAAGAACTTGCTATCAGACGTGATGAG
ATGTTTAGAAAACACGTGCAACTGCAATATTTGTTGGACATTGAACAGGT
CTTGGATAGAAAGGGAAGTAAGTGATCCCTTCTTTTCATCGATATGTAGA
ATTGATATTTAACGTGGATTAGACAGTCTTTTATTTGTTTCACGAAGGCA
ATGGTTATCAGACTCGGTTTTTCATAAGCCGAGCTGAACACGGGGGAGGG
GGAGGTGGTTCGAACCGCGGACCCCTGGTTTGACCATTTTTGTTATCGCT
CCTTTAGCCTTAGCGAGCACCTCACTCGTTTAAATGCGTAAAAAACGCGG
GTGACGTCTAGAATAGGCTACTTTAGCCTACTCTTCGGGATATGCGCACT
GTTCATGTTTTGAATATTGAATTTCTCCGGATACATCGCATGCACACTGA
GAATTTGATTAGATTTCTATTATGTCCAATCCTATTAAAAAGGGAATTCC
CGTTGGGGGTCACTAGTGGCCGTATACATTTATTGTGTTTTACATGACTT
GAATTTTCAACTTACTTATTATATTTTCAGACGTGTCTGAACCAGTGCAC
GTGCGACGTCTTCCGTGTATCAAACAACACCGTATTCTGATGTCATCTTT
ATTCAAACTGATCAAGAATACGGATTTCCAACTCATCTTTCACATGCAAG
GTGAATTGATTTCAATTTAAGTTTTTCTAATCCAGACAATACACATTTTT
TTCAATCCAGACAATACACATTTTTAATCCAGACAAAAATTTTTAACAAC
AGCCAAAATTTTTGAAGCTTTTCTGAGCCTTTGGAGGTTTTTAACTTTTT
GAGATTTAAGCCTAAAAATATTCTTAACATATGTTCTTATTTTCAACATC
TTATGGGTATTTTCGTCCATTTTCCTAAGAAATCGGGTGTTTTAGAGTCC
ACACAGCCTTAGAATGTTCTTAACTTGTTCTTAGCATTTTAGTCATCGAA
GCCCTTATGTTCTTATAAAAAACGTGTATTCTGATATTGTCATCATAAAG
GCAAAAAGGTTCAATCTCAAAATAACAAAATAAATGTCTCATGAATGTAA
GATTCTTCCAGCTTATGTAAGCCTAAATAAGTCTCGGTTCGTAAAGATGG
GGCCCTACCTATTATGCGCAATATTACCTAAAAAACAAAAAATTTAGTCC
TCTCAAACAGTAATTTGAATCGTTCTAATTTGAATGCTTTCGTATCGTAA
AATTTGAATAGCAGTCTCTCTTTGAAATAGATTAAAACTATCCATATGAA
TATAGTTTCAATGTCAAATTTTGCATCAGAAAGTTCGCCTCCTTCACTTG
TGCCTCGCTGCAATCGCACCTTTTGGCTTCAATCCTTTTTGCTTGAAGAA
AAGATTATACGTAATAAAAATGTAGCGGGCGCTCGAAAAAAAAAGTTGAA
CAGATTTTAAATTTTTTCAACCGTTACGTCAGATCGCGCCAATGGAATTG
CCTCATTTTTCTTTTGACCAATAGCGTGGCAGCATTGCTCGAAAAGGTGT
GATCGAAGCGCGCACAAGTGGAGACCGCTCTTTAAAAACAATTCAAGCGC
CATCAAAGTTATTGTTTTTCTTTCTATTGTTCCTAATTAGAATCTATTTG
TTTATTTCAGGAATCGTCGCGTCCATTGAAGGCTTATACGAAATTCTCTT
AAACGAGATGCTTATTGACATTTTCCCCGGTAGCGAACGAGCGATCGGGA
TTCTCGGTTTCGTTTCGGTCATTCTCGGTTTTACGACGAACATTCTCGTC
GGTGCTTTAATTGATAAAACGGGACATTACCGACGAGTGTCCTTTATCGT
TTTCTTCTTAACGACAATTCTCGCCTCGTTATGGTATATAGCGATCGAGT
ATATCCATAATTTCCTGGCAATCTCAATCATATTAAGTCTGTTAATGTCC
ATCAGTACCTCATATTACACAATCGCTTTTGCACACGGAGCACAAGTAGC
CGACAATGTCTCCGCATCTGCAATTGGAGTCATGTTGGTGTTAACATCAC
AGATTTATGATACTATGAGCTCATTTGTCGCAACTGAAATTTTATCGAGT
TTTGGATCATCCTATGTGAATGGTCTTGCTATTACTTTGTGTGTTGTTGC
AACGATGTTGTCATTCTTTGTAGGGAATGGTGATAATAAAAGGACAGAGG
TCGCAGCACCGGCCCATGTTTGA Coding sequence (CDS) from alignment at sc0000140_pilon:495472..499444- >XLOC_035947 ID=XLOC_035947|Name=XLOC_035947|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3606bp|location=Sequence derived from alignment at sc0000140_pilon:495472..499444- (Clytia hemisphaerica_ch_hm2_pilon)
ATAACCAAACAATACTATTGGAGTCTACAAAGAGCTTCTATCACAAGGAA
AGTTAATCGACTCTAAAGAGAAAACCAAGAGATCCTTCCACATAACCAGT
CAAACTCAGATAGGAAGAAAAAGAGAGTGTTTCAAATAAAAGCACAGAAC
AAAAGAAGGTTTCAATCAAATCCACAAACTCATACCAAAACACTTTGTAA
AACAACAATGGCTCCATGCTCAAACACAAAGTGTCAACAACAACCAGAGC
CTCCATTTATTTACCAAAAACCACCATCATCAAGCAACACCAAAGAATCC
TTCGACAATCTCAACAACATTCATCAATCATCCCCAATCATCACCGAAGA
TGATACAGAATCACCAGAACCACCATTACAACCAGTATCTCCAGAAGAGG
ATATTATATTTCAGCTTCATCCTCAACGTTGGTTCGTCCTGGCATCATAT
TGCCTCCTATCCTTGGTCTGTGGCTCAAATTGGCTTTGCTTTCCAGCAGT
ATCCAACATCTTAAGAGAATATTACCAAATCAGCATCTTGTCGATCAATA
TGCTTTCAATCGTATTTGGAATCTGTTTAGTTCTTTTCTCCATACCATTT
GCACTGCTGTTGAACAAATATGGTCTTGCAGTGGTAATGCAGACGTCAGC
ATTTCTCAATTTAACAGATAACCAAACAATACTATTGGAGTCTACAAAGA
GCTTCTATCACAAGGAAAGTTAATCGACTCTAAAGAGAAAACCAAGAGAT
CCTTCCACATAACCAGTCAAACTCAGATAGGAAGAAAAAGAGAGTGTTTC
AAATAAAAGCACAGAACAAAAGAAGGTTTCAATCAAATCCACAAACTCAT
ACCAAAACACTTTGTAAAACAACAATGGCTCCATGCTCAAACACAAAGTG
TCAACAACAACCAGAGCCTCCATTTATTTACCAAAAACCACCATCATCAA
GCAACACCAAAGAATCCTTCGACAATCTCAACAACATTCATCAATCATCC
CCAATCATCACCGAAGATGATACAGAATCACCAGAACCACCATTACAACC
AGTATCTCCAGAAGAGGATATTATATTTCAGCTTCATCCTCAACGTTGGT
TCGTCCTGGCATCATATTGCCTCCTATCCTTGGTCTGTGGCTCAAATTGG
CTTTGCTTTCCAGCAGTATCCAACATCTTAAGAGAATATTACCAAATCAG
CATCTTGTCGATCAATATGCTTTCAATCGTATTTGGAATCTGTTTAGTTC
TTTTCTCCATACCATTTGCACTGCTGTTGAACAAATATGGTCTTGCAGTG
GTAATGCAGACGTCAGCATTTCTCAATTTAACAGGAGCCCTTATCAAATA
TTTTGGAGATGATGCAGATCATGGCTACTGGTTCCTGCTCTGTGGTAACA
CATTTCACGCCTTGTCTGTAGCAGGCTTCCTCTTCCTGCCAGGAGACATC
GCATCCACTTGGTTCGGGGAACACGAAGCAGGGAAGGCTACATCCCTATG
TGTAGCATTCGACGCTTTAGGGACCGGGGTAGGCTTCTTACTAGCTACCA
CCATCGTTCAAGGAAATGAAGACCCCTACATTGTTCAAGGTAGCATCAAG
CAGTTCCTATTATCTCAGCTGATTCCATCGGTAGCTGTCTTTCTATTTGT
CTTGTTGTTCGTGAGAAGAAGACCTCCCCATCCACCGAACTTCAAAGAAC
TTGCTATCAGACGTGATGAGATGTTTAGAAAACACGTGCAACTGCAATAT
TTGTTGGACATTGAACAGGTCTTGGATAGAAAGGGAAGAGCCCTTATCAA
ATATTTTGGAGATGATGCAGATCATGGCTACTGGTTCCTGCTCTGTGGTA
ACACATTTCACGCCTTGTCTGTAGCAGGCTTCCTCTTCCTGCCAGGAGAC
ATCGCATCCACTTGGTTCGGGGAACACGAAGCAGGGAAGGCTACATCCCT
ATGTGTAGCATTCGACGCTTTAGGGACCGGGGTAGGCTTCTTACTAGCTA
CCACCATCGTTCAAGGAAATGAAGACCCCTACATTGTTCAAGGTAGCATC
AAGCAGTTCCTATTATCTCAGCTGATTCCATCGGTAGCTGTCTTTCTATT
TGTCTTGTTGTTCGTGAGAAGAAGACCTCCCCATCCACCGAACTTCAAAG
AACTTGCTATCAGACGTGATGAGATGTTTAGAAAACACGTGCAACTGCAA
TATTTGTTGGACATTGAACAGGTCTTGGATAGAAAGGGAAACGTGTCTGA
ACCAGTGCACGTGCGACGTCTTCCGTGTATCAAACAACACCGTATTCTGA
TGTCATCTTTATTCAAACTGATCAAGAATACGGATTTCCAACTCATCTTT
CACATGCAAGACGTGTCTGAACCAGTGCACGTGCGACGTCTTCCGTGTAT
CAAACAACACCGTATTCTGATGTCATCTTTATTCAAACTGATCAAGAATA
CGGATTTCCAACTCATCTTTCACATGCAAGGAATCGTCGCGTCCATTGAA
GGCTTATACGAAATTCTCTTAAACGAGATGCTTATTGACATTTTCCCCGG
TAGCGAACGAGCGATCGGGATTCTCGGTTTCGTTTCGGTCATTCTCGGTT
TTACGACGAACATTCTCGTCGGTGCTTTAATTGATAAAACGGGACATTAC
CGACGAGTGTCCTTTATCGTTTTCTTCTTAACGACAATTCTCGCCTCGTT
ATGGTATATAGCGATCGAGTATATCCATAATTTCCTGGCAATCTCAATCA
TATTAAGTCTGTTAATGTCCATCAGTACCTCATATTACACAATCGCTTTT
GCACACGGAGCACAAGTAGCCGACAATGTCTCCGCATCTGCAATTGGAGT
CATGTTGGTGTTAACATCACAGATTTATGATACTATGAGCTCATTTGTCG
CAACTGAAATTTTATCGAGTTTTGGATCATCCTATGTGAATGGTCTTGCT
ATTACTTTGTGTGTTGTTGCAACGATGTTGTCATTCTTTGTAGGGAATGG
TGATAATAAAAGGACAGAGGTCGCAGCACCGGCCCATGTTTGAGAATCGT
CGCGTCCATTGAAGGCTTATACGAAATTCTCTTAAACGAGATGCTTATTG
ACATTTTCCCCGGTAGCGAACGAGCGATCGGGATTCTCGGTTTCGTTTCG
GTCATTCTCGGTTTTACGACGAACATTCTCGTCGGTGCTTTAATTGATAA
AACGGGACATTACCGACGAGTGTCCTTTATCGTTTTCTTCTTAACGACAA
TTCTCGCCTCGTTATGGTATATAGCGATCGAGTATATCCATAATTTCCTG
GCAATCTCAATCATATTAAGTCTGTTAATGTCCATCAGTACCTCATATTA
CACAATCGCTTTTGCACACGGAGCACAAGTAGCCGACAATGTCTCCGCAT
CTGCAATTGGAGTCATGTTGGTGTTAACATCACAGATTTATGATACTATG
AGCTCATTTGTCGCAACTGAAATTTTATCGAGTTTTGGATCATCCTATGT
GAATGGTCTTGCTATTACTTTGTGTGTTGTTGCAACGATGTTGTCATTCT
TTGTAGGGAATGGTGATAATAAAAGGACAGAGGTCGCAGCACCGGCCCAT
GTTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000140_pilon | genome | sc0000140_pilon:495472..499444 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1243-1803:562 |
| Aaloc | 1123-1239:1642 |
| Aaloc | 670-1119:2558 |
| Aaloc | 1-666:3974 |
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